Ggra6626.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6626.t1
Unique NameGgra6626.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length166
Homology
BLAST of Ggra6626.t1 vs. uniprot
Match: A0A2V3IHL1 (Mitochondrial metalloendopeptidase OMA1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHL1_9FLOR)

HSP 1 Score: 184 bits (468), Expect = 1.060e-55
Identity = 93/150 (62.00%), Postives = 126/150 (84.00%), Query Frame = 0
Query:    1 MRMCS-EEELAMMLAHEIAHAVNRHSAEKIQLQMLIWPLFVLLSAVFSSQMLSISLTKLLLELPFGKRLEWEAEEVGMIIMTEACYDPRKGPSIFDKLAHAMGEQKGGWVSTQMKSIVSTHPMSARRASDLRKKSEQLADRYEIKCGVAQ 149
            +R+CS +EE+AM+L+HEIAHA+NRHSAEK+Q+QML+ PL V+LSAV SS M+S S++KLLLELP+G++LE EA+ VG+I+MTEACYDPRKGP +FDKLA    E++GGW+S ++KS+VSTHPMS  RA  LR+++  LA R++ +C  AQ
Sbjct:   87 LRLCSCDEEVAMVLSHEIAHAINRHSAEKMQVQMLMLPLVVVLSAVLSSHMMSASVSKLLLELPYGRKLEREADAVGLIVMTEACYDPRKGPVVFDKLAAVTREEEGGWISKRVKSMVSTHPMSKERAWQLRQQAAALALRFDERCVGAQ 236          
BLAST of Ggra6626.t1 vs. uniprot
Match: A0A7S3EFT5 (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EFT5_9RHOD)

HSP 1 Score: 92.4 bits (228), Expect = 1.580e-19
Identity = 50/141 (35.46%), Postives = 82/141 (58.16%), Query Frame = 0
Query:    5 SEEELAMMLAHEIAHAVNRHSAEKIQLQMLIWPLFVLLSAVFSSQMLSISLTKLLLELPFGKRLEWEAEEVGMIIMTEACYDPRKGPSIFDKLAHAMGEQKGGWVSTQMKSIVSTHPMSARRASDLRKKSEQLADRYEIKC 145
            +++ELA +LAHE+ HAV RHSAE++    L+ P+ +L++ +  + +L+  L  L + LP  +R E EA+ +G+ +MT+ACYDP   P+IF KL              ++   +STHP   RR + L     ++ + YE +C
Sbjct:  146 TDDELAAVLAHEVGHAVARHSAEQVSRMFLLIPVRLLMAFILDTYVLNDILVNLFILLPSSRRNEMEADYIGLRLMTKACYDPHGSPAIFTKLGEYAKRNP-----MKIPEYLSTHPADDRRITTLEGLLPEVLEEYETQC 281          
BLAST of Ggra6626.t1 vs. uniprot
Match: A0A5B8MI38 (Metallopeptidase n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MI38_9CHLO)

HSP 1 Score: 92.0 bits (227), Expect = 3.790e-19
Identity = 58/141 (41.13%), Postives = 82/141 (58.16%), Query Frame = 0
Query:    5 SEEELAMMLAHEIAHAVNRHSAEKIQLQMLIWPLFVLLSAVFSSQMLSISLTKLLLELPFGKRLEWEAEEVGMIIMTEACYDPRKGPSIFDKLAHAMGEQKGGWVSTQMKSIVSTHPMSARRASDLRKKSEQLADRYEIKC 145
            S+EELAM+LAHEIAH V RH+AEKI  QM    L  L S    +  +S  L  L L+LP+ ++ E EA+ +G+ +M  AC+ P+ GP    +L+   GE         M   +STHP S  R S+L+K+  + ++ YE KC
Sbjct:  197 SKEELAMVLAHEIAHTVARHNAEKITQQMTSTVLAALASLALGADFVSTPLI-LGLQLPYSRQCENEADAIGLQLMARACFAPQNGPKAMSRLS---GE------GNAMPEFLSTHPHSETRVSNLKKELGKASEVYESKC 327          
BLAST of Ggra6626.t1 vs. uniprot
Match: mitochondrial metalloendopeptidase OMA1 n=1 Tax=Oryza brachyantha TaxID=4533 RepID=UPI001ADC253A (mitochondrial metalloendopeptidase OMA1 n=1 Tax=Oryza brachyantha TaxID=4533 RepID=UPI001ADC253A)

HSP 1 Score: 90.1 bits (222), Expect = 4.480e-18
Identity = 49/129 (37.98%), Postives = 82/129 (63.57%), Query Frame = 0
Query:    5 SEEELAMMLAHEIAHAVNRHSAEKIQLQMLIWPL-FVLLSAVFSSQMLSISLTKLLLELPFGKRLEWEAEEVGMIIMTEACYDPRKGPSIFDKLAHAMGEQKGGWVSTQMKSIVSTHPMSARRASDLRK 132
            ++ E+A +LAHE+ HA+ RHSAE I   M  W L  V+L  ++   +++ +++ LLL LPF +R+E EA+ +G++++  A YDPR  PS+++KL    G+       + + + +STHP S +RA  LR+
Sbjct:  306 TDAEIATVLAHEVGHAIARHSAEMITKNMWFWVLQIVILQFIYMPDLIN-AMSTLLLRLPFSRRMEIEADHIGLLLLGAAGYDPRIAPSVYEKLGKIAGD-------SALSNYLSTHPSSKKRAQLLRQ 426          
BLAST of Ggra6626.t1 vs. uniprot
Match: J3LGU5 (Peptidase_M48 domain-containing protein n=1 Tax=Oryza brachyantha TaxID=4533 RepID=J3LGU5_ORYBR)

HSP 1 Score: 90.1 bits (222), Expect = 5.150e-18
Identity = 49/129 (37.98%), Postives = 82/129 (63.57%), Query Frame = 0
Query:    5 SEEELAMMLAHEIAHAVNRHSAEKIQLQMLIWPL-FVLLSAVFSSQMLSISLTKLLLELPFGKRLEWEAEEVGMIIMTEACYDPRKGPSIFDKLAHAMGEQKGGWVSTQMKSIVSTHPMSARRASDLRK 132
            ++ E+A +LAHE+ HA+ RHSAE I   M  W L  V+L  ++   +++ +++ LLL LPF +R+E EA+ +G++++  A YDPR  PS+++KL    G+       + + + +STHP S +RA  LR+
Sbjct:  350 TDAEIATVLAHEVGHAIARHSAEMITKNMWFWVLQIVILQFIYMPDLIN-AMSTLLLRLPFSRRMEIEADHIGLLLLGAAGYDPRIAPSVYEKLGKIAGD-------SALSNYLSTHPSSKKRAQLLRQ 470          
BLAST of Ggra6626.t1 vs. uniprot
Match: mitochondrial metalloendopeptidase OMA1-like n=1 Tax=Triticum dicoccoides TaxID=85692 RepID=UPI001891E830 (mitochondrial metalloendopeptidase OMA1-like n=1 Tax=Triticum dicoccoides TaxID=85692 RepID=UPI001891E830)

HSP 1 Score: 85.9 bits (211), Expect = 6.320e-18
Identity = 47/122 (38.52%), Postives = 75/122 (61.48%), Query Frame = 0
Query:    5 SEEELAMMLAHEIAHAVNRHSAEKIQLQMLIWPLFVLLSAVFSSQMLSISLTKLLLELPFGKRLEWEAEEVGMIIMTEACYDPRKGPSIFDKLAHAMGEQKGGWVSTQMKSIVSTHPMSARR 126
            ++ E+A +L HE+AHA+ RH+AEK+   M I+ L V L     +  L   LT+ LL LPF +++E EA+ +G++++  A +DPR  P +++KL       K G  S+ +K  +STHP S +R
Sbjct:   42 TDAEIAAVLGHEVAHAIARHAAEKLTKHMWIFMLTVFLLIFIDAPDLIDKLTEYLLSLPFSRKMEIEADHIGIMLLASAGFDPRIAPKVYEKLG------KVGGNSSPLKEYMSTHPCSKKR 157          
BLAST of Ggra6626.t1 vs. uniprot
Match: A0A0E0K501 (Peptidase_M48 domain-containing protein n=1 Tax=Oryza punctata TaxID=4537 RepID=A0A0E0K501_ORYPU)

HSP 1 Score: 88.6 bits (218), Expect = 9.000e-18
Identity = 47/129 (36.43%), Postives = 82/129 (63.57%), Query Frame = 0
Query:    5 SEEELAMMLAHEIAHAVNRHSAEKIQLQMLIWPL-FVLLSAVFSSQMLSISLTKLLLELPFGKRLEWEAEEVGMIIMTEACYDPRKGPSIFDKLAHAMGEQKGGWVSTQMKSIVSTHPMSARRASDLRK 132
            ++ E+A +L HE+ HA+ RHSAE I   +  W L  V+L  ++   M++ +++ LLL+LPF +R+E EA+ +G++++  A YDPR  PS+++KL    G+       + + + +STHP + +RA  LR+
Sbjct:  215 NDAEIATVLGHEVGHAIARHSAETITKNLWFWILQIVILQFIYMPDMIN-AMSTLLLKLPFSRRMEIEADHIGLLLLAAAGYDPRVAPSVYEKLGKIAGD-------SALSNYLSTHPSAKKRAQLLRQ 335          
BLAST of Ggra6626.t1 vs. uniprot
Match: A0A6S7Q5G9 (Peptidase_M48 domain-containing protein n=2 Tax=Lactuca saligna TaxID=75948 RepID=A0A6S7Q5G9_LACSI)

HSP 1 Score: 85.5 bits (210), Expect = 1.340e-17
Identity = 52/153 (33.99%), Postives = 88/153 (57.52%), Query Frame = 0
Query:    5 SEEELAMMLAHEIAHAVNRHSAEKIQLQMLIWPLFVLLSAVFSSQMLSISLTKLLLELPFGKRLEWEAEEVGMIIMTEACYDPRKGPSIFDKLAHAMGEQKGGWVSTQMKSIVSTHPMSARRASDLRKKSEQLADRYEIKCGVAQHMLEYDFG 157
            ++EE+A ++ HE+AHAV RH+AE+I  + L + +  L+   F    L  +++ LLL+LPF +R+E EA+ +G+++M  A YDPR  P +F+KL    G+       + ++  +STHP   RR+  L + S    +  EI   +++    Y  G
Sbjct:   59 TDEEIATIIGHEVAHAVARHAAEQIT-KNLWFTIGQLILYQFVMPDLVNTMSNLLLKLPFSRRMEIEADYIGLLLMASAGYDPRVAPKVFEKLGQVSGD-------SALRDYLSTHPSGKRRSKLLSEASVIYREAMEITFSMSRFQGHYAEG 203          
BLAST of Ggra6626.t1 vs. uniprot
Match: I1P405 (Peptidase_M48 domain-containing protein n=12 Tax=Oryza TaxID=4527 RepID=I1P405_ORYGL)

HSP 1 Score: 87.4 bits (215), Expect = 4.050e-17
Identity = 46/129 (35.66%), Postives = 82/129 (63.57%), Query Frame = 0
Query:    5 SEEELAMMLAHEIAHAVNRHSAEKIQLQMLIWPL-FVLLSAVFSSQMLSISLTKLLLELPFGKRLEWEAEEVGMIIMTEACYDPRKGPSIFDKLAHAMGEQKGGWVSTQMKSIVSTHPMSARRASDLRK 132
            ++ E+A +L HE+ HA+ RH+AE I   +  W L  V++  ++   M++ +++ LLL+LPF +R+E EA+ +G++++  A YDPR  PS+++KL    G+       + + + +STHP S +RA  LR+
Sbjct:  304 TDAEIATVLGHEVGHAIARHAAEMITKNLWFWILQIVIMQFIYMPDMIN-AMSTLLLKLPFSRRMEIEADHIGLLVLGAAGYDPRVAPSVYEKLGKIAGD-------STLSNYLSTHPSSKKRAQLLRQ 424          
BLAST of Ggra6626.t1 vs. uniprot
Match: M2XY90 (Metallopeptidase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XY90_GALSU)

HSP 1 Score: 86.7 bits (213), Expect = 5.950e-17
Identity = 47/141 (33.33%), Postives = 78/141 (55.32%), Query Frame = 0
Query:    5 SEEELAMMLAHEIAHAVNRHSAEKIQLQMLIWPLFVLLSAVFSSQMLSISLTKLLLELPFGKRLEWEAEEVGMIIMTEACYDPRKGPSIFDKLAHAMGEQKGGWVSTQMKSIVSTHPMSARRASDLRKKSEQLADRYEIKC 145
            +++ LA +LAHEI HAV RH AEK+    +++ L  +++   ++  L+  +  +L  LPF ++LE EA+ +G+ +M +ACYDPR+ P +F+++A                  +STHP    R   L+    Q+   YE KC
Sbjct:  241 TDDALASVLAHEIGHAVARHGAEKLAFMKVLFILQFIVNIFVNTHALNSFMINILANLPFSRKLETEADYIGLHLMAKACYDPREAPHVFERIAKRNVNSP--------PEYLSTHPADKHRVERLQSWLPQVLPEYEEKC 373          
The following BLAST results are available for this feature:
BLAST of Ggra6626.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHL11.060e-5562.00Mitochondrial metalloendopeptidase OMA1 n=1 Tax=Gr... [more]
A0A7S3EFT51.580e-1935.46Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A5B8MI383.790e-1941.13Metallopeptidase n=2 Tax=Chloropicon primus TaxID=... [more]
mitochondrial metalloendopeptidase OMA1 n=1 Tax=Oryza brachyantha TaxID=4533 RepID=UPI001ADC253A4.480e-1837.98mitochondrial metalloendopeptidase OMA1 n=1 Tax=Or... [more]
J3LGU55.150e-1837.98Peptidase_M48 domain-containing protein n=1 Tax=Or... [more]
mitochondrial metalloendopeptidase OMA1-like n=1 Tax=Triticum dicoccoides TaxID=85692 RepID=UPI001891E8306.320e-1838.52mitochondrial metalloendopeptidase OMA1-like n=1 T... [more]
A0A0E0K5019.000e-1836.43Peptidase_M48 domain-containing protein n=1 Tax=Or... [more]
A0A6S7Q5G91.340e-1733.99Peptidase_M48 domain-containing protein n=2 Tax=La... [more]
I1P4054.050e-1735.66Peptidase_M48 domain-containing protein n=12 Tax=O... [more]
M2XY905.950e-1733.33Metallopeptidase n=1 Tax=Galdieria sulphuraria Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001915Peptidase M48PFAMPF01435Peptidase_M48coord: 3..132
e-value: 1.2E-13
score: 51.4
NoneNo IPR availablePANTHERPTHR22726METALLOENDOPEPTIDASE OMA1coord: 3..142
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 34..60
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 61..165
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..33
NoneNo IPR availableTMHMMTMhelixcoord: 34..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000859_piloncontigtig00000859_pilon:154680..155177 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6626.t1Ggra6626.t1Gracilaria gracilis GNS1m malemRNAtig00000859_pilon 154680..155177 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6626.t1 ID=Ggra6626.t1|Name=Ggra6626.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=166bp
MRMCSEEELAMMLAHEIAHAVNRHSAEKIQLQMLIWPLFVLLSAVFSSQM
LSISLTKLLLELPFGKRLEWEAEEVGMIIMTEACYDPRKGPSIFDKLAHA
MGEQKGGWVSTQMKSIVSTHPMSARRASDLRKKSEQLADRYEIKCGVAQH
MLEYDFGFPDVNSLD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001915Peptidase_M48