Ggra657.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra657.t1
Unique NameGgra657.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length340
Homology
BLAST of Ggra657.t1 vs. uniprot
Match: A0A2V3IRI3 (26 kDa periplasmic immunogenic protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRI3_9FLOR)

HSP 1 Score: 196 bits (497), Expect = 5.110e-58
Identity = 109/167 (65.27%), Postives = 132/167 (79.04%), Query Frame = 0
Query:  174 QQFDQVLAVLTEQGIESRDVQTTFFDVNPQFQRGPNGEDQGITGYQVTNQVRVVVRDLDNLGRILDALVSAGSNRISGVNFSIGNDMELRNRARALAVADATSRAGVYAQAAEVKVGELRAISEQSIPQPQLRQ-SFGAFAADASVPIATGELDVQATVFLQFALVD 339
            +QF  VLAVL+EQGIE RDVQT+FF+VNPQF+RGPNGE  GITGY+V+NQVRV+VRD+D LG+ILDALV+AGSN++SGV+FSI ++ E+ + ARA AVADAT  AGVYA AA + VG L AIS+QSI  P  R  S  A AA   VPIA+GEL V + V LQF LV+
Sbjct:   51 RQFQSVLAVLSEQGIEDRDVQTSFFNVNPQFRRGPNGEQLGITGYRVSNQVRVIVRDIDKLGQILDALVTAGSNQVSGVSFSIEDNQEITDTARAAAVADATRTAGVYAAAAGISVGRLIAISDQSIQAPLPRAVSLDAGAAGFGVPIASGELQVTSNVNLQFELVN 217          
BLAST of Ggra657.t1 vs. uniprot
Match: A0A2V3IQE7 (26 kDa periplasmic immunogenic protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQE7_9FLOR)

HSP 1 Score: 191 bits (485), Expect = 3.130e-56
Identity = 107/167 (64.07%), Postives = 134/167 (80.24%), Query Frame = 0
Query:  174 QQFDQVLAVLTEQGIESRDVQTTFFDVNPQFQRGPNGEDQGITGYQVTNQVRVVVRDLDNLGRILDALVSAGSNRISGVNFSIGNDMELRNRARALAVADATSRAGVYAQAAEVKVGELRAISEQSIPQPQLRQ-SFGAFAADASVPIATGELDVQATVFLQFALVD 339
            +QF  VLAVL+EQGIE RDVQT+FF+VNPQF+ GPNGE  GITGYQV+NQVRV+VRD++ LG+ILDALV+AGSN++SGV+FSI ++ E+ + ARA AVADAT  AGV+A AA VKVG L A+S+QSI  P+    S  A AAD  VPIA+GEL++ + V LQF LV+
Sbjct:   51 RQFQSVLAVLSEQGIEDRDVQTSFFNVNPQFRFGPNGEQLGITGYQVSNQVRVIVRDIEKLGQILDALVAAGSNQVSGVSFSIEDNQEITDTARAAAVADATRTAGVFAAAAGVKVGRLIAVSDQSIQAPEPPSFSLQAEAADV-VPIASGELEITSNVNLQFELVN 216          
BLAST of Ggra657.t1 vs. uniprot
Match: A0A2V3IQG5 (26 kDa periplasmic immunogenic protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQG5_9FLOR)

HSP 1 Score: 175 bits (444), Expect = 7.870e-50
Identity = 101/171 (59.06%), Postives = 128/171 (74.85%), Query Frame = 0
Query:  174 QQFDQVLAVLTEQGIESRDVQTTFFDVNPQFQRGPNGEDQGITGYQVTNQVRVVVRDLDNLGRILDALVSAGSNRISGVNFSIGNDMELRNRARALAVADATSRAGVYAQAAEVKVGELRAISEQS---IPQPQLRQSFGAFAA--DASVPIATGELDVQATVFLQFALVD 339
            QQF QVL V++EQGIE RDVQT+ F+VNPQF+RGPN E   ITGY+V+NQVR++VRDLD LG++LDAL++AGSNR+S V FSI N+ EL   AR  AVADAT  AGV A AA V+VG+L AI++QS   +P    R S  AF    +  VPIATG+L+V ++V LQF L++
Sbjct:   70 QQFQQVLRVISEQGIEDRDVQTSSFNVNPQFERGPNFEIIRITGYEVSNQVRIIVRDLDQLGQVLDALIAAGSNRVSSVGFSIENNKELLKTARTSAVADATRTAGVLAGAAGVQVGKLIAITDQSGSSLP----RASIAAFGVGGNGGVPIATGQLEVSSSVTLQFELIN 236          
BLAST of Ggra657.t1 vs. uniprot
Match: A0A3E0Q6E1 (SIMPL domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0Q6E1_9BACT)

HSP 1 Score: 152 bits (383), Expect = 8.790e-41
Identity = 89/187 (47.59%), Postives = 125/187 (66.84%), Query Frame = 0
Query:  162 LRTGAVLWGGKGQQ--------FDQVLAVLTEQGIESRDVQTTFFDVNPQFQRGPNGEDQG-ITGYQVTNQVRVVVRDLDNLGRILDALVSAGSNRISGVNFSIGNDMELRNRARALAVADATSRAGVYAQAAEVKVGELRAISEQSIPQPQLRQSFGAFAADASVPIATGELDVQATVFLQFALVD 339
            +R G V    K  +         D++++VL EQGI  +++QT+ F+V+PQ++    G  Q  + GY+VTNQ+RV V DL  LG+ILDALV+AGSN +SG++F I +   L N AR  AVADA SRA +YAQ+A V +G++  ISEQ++  PQ ++     AADASVPIATGE +++ATV + FAL D
Sbjct:   47 IRAGVVTQSAKASEALTSNNDAMDEIMSVLEEQGIAPKNIQTSNFNVSPQYKHDDQGRRQPEVVGYRVTNQLRVDVHDLPKLGKILDALVAAGSNELSGISFGINDPTGLLNEARKRAVADAHSRAELYAQSAGVALGKVLTISEQTVRTPQPQRLAARKAADASVPIATGEQELRATVDMVFALDD 233          
BLAST of Ggra657.t1 vs. uniprot
Match: A0A2V3IQF5 (26 kDa periplasmic immunogenic protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQF5_9FLOR)

HSP 1 Score: 137 bits (346), Expect = 4.210e-36
Identity = 81/156 (51.92%), Postives = 109/156 (69.87%), Query Frame = 0
Query:  188 IESRDVQTTFFDVNPQFQRGPNGEDQGITGYQVTNQVRVVVRDLDNLGRILDALVSAGSNRISGVNFSIGNDMELRNRARALAVADATSRAGVYAQAAEVKVGELRAISEQSIPQ----PQLRQSFGAFAADASVPIATGELDVQATVFLQFALVD 339
            IE +DVQT+ F+VNPQF+RGPN E   ITGY+++N VR++VRDLD LG+ILDAL++AGSNR+S V FSI N+ E+   AR  AVA AT  AG+ A AA V+V +L AI++QS       P +  + G    D  VPIA G+L V +++ LQF L++
Sbjct:   18 IEDQDVQTSSFNVNPQFKRGPNFEIIRITGYEISNHVRIIVRDLDKLGQILDALIAAGSNRVSSVGFSIENNKEILKTARTSAVAYATRTAGILAGAAGVQVRKLIAITDQSTSALYAVPIITFASGG---DGKVPIAIGQLKVSSSITLQFELMN 170          
BLAST of Ggra657.t1 vs. uniprot
Match: A0A2E7EHA8 (SIMPL domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7EHA8_9PLAN)

HSP 1 Score: 137 bits (346), Expect = 2.170e-35
Identity = 75/163 (46.01%), Postives = 114/163 (69.94%), Query Frame = 0
Query:  178 QVLAVLTEQGIESRDVQTTFFDVNPQFQRGPNGE-DQGITGYQVTNQVRVVVRDLDNLGRILDALVSAGSNRISGVNFSIGNDMELRNRARALAVADATSRAGVYAQAAEVKVGELRAISEQSIPQPQLRQSFGAFAADASVPIATGELDVQATVFLQFALVD 339
            +++A L  Q I ++D+QT+ F V+PQ+ R   G   Q I GY+V+NQVRVV+R+L  LG++LD LVS GSNR+SG++F I +   + N AR  A+ADA S+A +YAQA  +KVG++ ++SE S+  P+ +    A  AD++VPIA+GE ++ AT+ + FA+ D
Sbjct:   67 KLMAALKAQKIPAKDIQTSDFSVSPQYARDDRGRTQQEIVGYRVSNQVRVVIRNLPELGKVLDTLVSTGSNRVSGISFGITDSDGILNEARNNAIADARSKANLYAQALGIKVGKVVSVSESSVIAPRPQFFARAAMADSAVPIASGEQELTATIDVVFAIAD 229          
BLAST of Ggra657.t1 vs. uniprot
Match: A0A3M1JZB6 (DUF541 domain-containing protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1JZB6_9PROT)

HSP 1 Score: 125 bits (315), Expect = 5.040e-31
Identity = 71/162 (43.83%), Postives = 109/162 (67.28%), Query Frame = 0
Query:  178 QVLAVLTEQGIESRDVQTTFFDVNPQFQRGPNGEDQGITGYQVTNQVRVVVRDLDNLGRILDALVSAGSNRISGVNFSIGNDMELRNRARALAVADATSRAGVYAQAAEVKVGELRAISEQSI--PQPQLRQSFGAFAADASVPIATGELDVQATVFLQFAL 337
            +++A L  QG+ ++D+QT  F V P ++R  +G    ITGY+VTN VR+ VRDL  LG ILD +V+ GSNRI+G+ F++ +  +LR+ AR  AVADAT +A +YA++A V++G++ +ISE +   P+P  R    A  A A+VP+ +GE  +Q  V + +AL
Sbjct:   52 RIIAELKTQGLAAKDIQTANFSVQPLYRRFKDGRPAEITGYRVTNSVRITVRDLPRLGTILDKVVTLGSNRINGIEFALDDAEKLRDAARRKAVADATRKARLYAESAGVRLGDVLSISETTAYPPRPVYRARLQAAPA-AAVPVQSGEQSIQVQVNMSWAL 212          
BLAST of Ggra657.t1 vs. uniprot
Match: A0A2H6IUB3 (26 kDa periplasmic immunogenic protein n=2 Tax=Bacteria TaxID=2 RepID=A0A2H6IUB3_9BACT)

HSP 1 Score: 125 bits (315), Expect = 9.390e-31
Identity = 77/165 (46.67%), Postives = 101/165 (61.21%), Query Frame = 0
Query:  178 QVLAVLTEQGIESRDVQTTFFDVNPQFQRGPNGEDQGITGYQVTNQVRVVVRDLDNLGRILDALVSAGSNRISGVNFSIGNDMELRNRARALAVADATSRAGVYAQAAEVKVGELRAISEQSIPQPQLRQSFGAFAAD---ASVPIATGELDVQATVFLQFALVD 339
            QV A L +Q +E RD+QTT F V P+FQ   NG+   I GY+V N VR++VRDL NLG ILD  VS GSN+I+G++FS+     L N AR  A+ADA  +A +YA AA   + ++  I+E  +  P  R  F   A +   ASVPIA GE  VQA V + + L D
Sbjct:   74 QVSAALKKQQVEQRDIQTTDFSVRPKFQHFKNGKPPAIIGYRVVNSVRIMVRDLKNLGAILDQAVSVGSNQINGISFSVAEPAALENMARKAAMADARQKADLYAAAAGASLHKVLTITEAFVTGPP-RPRFARPALESKSASVPIAPGEYKVQARVNVTWELKD 237          
BLAST of Ggra657.t1 vs. uniprot
Match: A0A1G7UM59 (Uncharacterized protein n=1 Tax=Pelagibacterium luteolum TaxID=440168 RepID=A0A1G7UM59_9HYPH)

HSP 1 Score: 124 bits (311), Expect = 3.780e-30
Identity = 68/168 (40.48%), Postives = 102/168 (60.71%), Query Frame = 0
Query:  179 VLAVLTEQGIESRDVQTTFFDVNPQFQRGPNGEDQGIT------GYQVTNQVRVVVRDLDNLGRILDALVSAGSNRISGVNFSIGNDMELRNRARALAVADATSRAGVYAQAAEVKVGELRAISE---QSIPQPQLRQSFGAFAADASVPIATGELDVQATVFLQFAL 337
            +++ L E G+E RD+QT+ F V PQ+      +D G T      GYQV+N V ++VRDL+ LG +LD  V+ G+N I+G++F + +  EL  +AR LAVADA ++A  YA AA+  +G + +I E   Q  PQP  R +    AAD+SVP+  GEL    T  + +++
Sbjct:   67 LVSALREAGLEDRDIQTSDFTVTPQYVYSDQRDDSGYTLPPEIQGYQVSNSVTIIVRDLEGLGSVLDRAVTVGANTINGISFDVEDASELETKARELAVADAIAKAETYAVAADFTLGSIESIREADQQMPPQPMYRAAMAEMAADSSVPVEAGELAFSVTTTISWSI 234          
BLAST of Ggra657.t1 vs. uniprot
Match: A0A369W3H2 (DUF541 domain-containing protein n=1 Tax=Pelagibacterium lacus TaxID=2282655 RepID=A0A369W3H2_9HYPH)

HSP 1 Score: 123 bits (309), Expect = 7.220e-30
Identity = 67/171 (39.18%), Postives = 106/171 (61.99%), Query Frame = 0
Query:  174 QQFDQVLAVLTEQGIESRDVQTTFFDVNPQFQRGPNGEDQG------ITGYQVTNQVRVVVRDLDNLGRILDALVSAGSNRISGVNFSIGNDMELRNRARALAVADATSRAGVYAQAAEVKVGELRAISE---QSIPQPQLRQSFGAFAADASVPIATGELDVQATVFLQF 335
            +  DQ++AVL E G+E+RD+QT+ F V+P++      ++ G      I GY+V+N V ++VRDL+ LG +LD  VS G+N I+G++F + +   + ++AR  AVADA ++A  YA+AA V +G + +ISE    + P P  R      +ADASVP+  GEL    T  +++
Sbjct:   62 EAMDQLVAVLREAGLENRDIQTSNFSVSPRYVYSDARDESGYSMPPRIQGYEVSNSVTIIVRDLEALGAVLDQAVSVGANTINGISFDVTDSTAIEHKAREAAVADAIAKAQTYARAANVTLGSIESISEVERNAPPMPMYRAEVAQMSADASVPVEAGELAFSVTTTIKW 232          
The following BLAST results are available for this feature:
BLAST of Ggra657.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRI35.110e-5865.2726 kDa periplasmic immunogenic protein n=1 Tax=Gra... [more]
A0A2V3IQE73.130e-5664.0726 kDa periplasmic immunogenic protein n=1 Tax=Gra... [more]
A0A2V3IQG57.870e-5059.0626 kDa periplasmic immunogenic protein n=1 Tax=Gra... [more]
A0A3E0Q6E18.790e-4147.59SIMPL domain-containing protein n=1 Tax=Planctomyc... [more]
A0A2V3IQF54.210e-3651.9226 kDa periplasmic immunogenic protein n=1 Tax=Gra... [more]
A0A2E7EHA82.170e-3546.01SIMPL domain-containing protein n=1 Tax=Planctomyc... [more]
A0A3M1JZB65.040e-3143.83DUF541 domain-containing protein (Fragment) n=1 Ta... [more]
A0A2H6IUB39.390e-3146.6726 kDa periplasmic immunogenic protein n=2 Tax=Bac... [more]
A0A1G7UM593.780e-3040.48Uncharacterized protein n=1 Tax=Pelagibacterium lu... [more]
A0A369W3H27.220e-3039.18DUF541 domain-containing protein n=1 Tax=Pelagibac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.2970Protein of unknown function (DUF541), domain 2coord: 174..257
e-value: 2.6E-45
score: 156.7
NoneNo IPR availableGENE3D3.30.110.170Protein of unknown function (DUF541), domain 1coord: 258..335
e-value: 2.6E-45
score: 156.7
NoneNo IPR availablePANTHERPTHR34387:SF1PERIPLASMIC IMMUNOGENIC PROTEIN-RELATEDcoord: 174..337
NoneNo IPR availablePANTHERPTHR34387SLR1258 PROTEINcoord: 174..337
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..82
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..104
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 116..134
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 105..115
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 135..339
IPR007497Protein of unknown function DUF541PFAMPF04402SIMPLcoord: 175..335
e-value: 3.5E-31
score: 109.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000947_piloncontigtig00000947_pilon:41663..45425 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra657.t1Ggra657.t1Gracilaria gracilis GNS1m malemRNAtig00000947_pilon 41663..45425 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra657.t1 ID=Ggra657.t1|Name=Ggra657.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=340bp
MWNLTALDLNESPPEVEWAHRLGHNLFRAGTPGERIYQAPLSTMLGPIGA
SFDTELATARQDTSRLSLRRGVTYVTRLRGRQILSWAYIAFSIVISCVCA
RKNWPRRDNAFERAKDAVDVATLLLVSVFGLVKLTSEDPTALKSLARGRA
PVEDLEQAGRFLRTGAVLWGGKGQQFDQVLAVLTEQGIESRDVQTTFFDV
NPQFQRGPNGEDQGITGYQVTNQVRVVVRDLDNLGRILDALVSAGSNRIS
GVNFSIGNDMELRNRARALAVADATSRAGVYAQAAEVKVGELRAISEQSI
PQPQLRQSFGAFAADASVPIATGELDVQATVFLQFALVD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007497DUF541