Ggra6556.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6556.t1
Unique NameGgra6556.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length211
Homology
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BLAST of Ggra6556.t1 vs. uniprot
Match: A0A2V3IIU0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIU0_9FLOR)

HSP 1 Score: 58.2 bits (139), Expect = 1.950e-7
Identity = 39/85 (45.88%), Postives = 51/85 (60.00%), Query Frame = 0 
Query:   19 RRKIFTILQEEKASLEARKADVEGRLDLENRRLEAHNRMGCTSERPASD--PCSWLSDPGDIARMRDRLKEASENKELILPIVEE 101
            R ++   L  EK  LEARKAD+  R  L  +RL +       +E  A D  PCSWLSDP DIA+MR  L  ASE+ EL++ +VE+
Sbjct:   14 RHQVHRQLLREKEELEARKADLLRRKALAIKRLLSAK----VAEGSAVDGEPCSWLSDPADIAKMRHDLCAASESDELLMKLVEQ 94
The following BLAST results are available for this feature:
BLAST of Ggra6556.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IIU01.950e-745.88Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 23..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 110..210
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000081_piloncontigtig00000081_pilon:259766..263414 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6556.t1Ggra6556.t1Gracilaria gracilis GNS1m malemRNAtig00000081_pilon 259766..263414 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6556.t1 ID=Ggra6556.t1|Name=Ggra6556.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=211bp
MEQAISAEEEHRSATPAMRRKIFTILQEEKASLEARKADVEGRLDLENRR
LEAHNRMGCTSERPASDPCSWLSDPGDIARMRDRLKEASENKELILPIVE
ERKMVATITKAERRCRGRPRPAADGGRANAPKEGHDRRPTAADGGQATAP
GAERRRPRRRARGRAKEAAPSRPGPSEGGRAVAPRAERRRPKGARGRPSD
GAQEGHDLPR*
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