Ggra6550.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6550.t1
Unique NameGgra6550.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length243
Homology
BLAST of Ggra6550.t1 vs. uniprot
Match: A0A2V3IIU4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIU4_9FLOR)

HSP 1 Score: 290 bits (742), Expect = 3.650e-96
Identity = 144/242 (59.50%), Postives = 182/242 (75.21%), Query Frame = 0
Query:    1 MLAVRNSAAFASSVLYTHQSPSFTNGVCRTPNPLHLHRAARRPRAAVYCTASDTPTKGLTIVETDVRVNSDLPRDKTREVLVSIKAQNIGGRRRRISGTVQVETPMERVWKVITAYDKIHLYMPNILSSNTEKRGGALYLDQTGVISRKLALNSRMLLRVSEDFTEKSITFSRVEGREFPEFEGRYSLRHGRDHVVVEYDLVALPFPLFPMWMVERKTLKEVPKMLAAIREEAILGRHIPIE 242
            MLA    AAFA S L+T +   F+         + LH+A RRPR A  C ASDTPT+   I++  V V SDLP DKTR+V +++KA+++GGRRRR+SG+V+VE+ ++RVW VIT+Y K+HLY+PNI+ S  + R   LYLDQ GVISRKLAL +RML+RV+ED  ++ ITFSRVEGR+F EFEGRY L      V+V YDLVA+PFPLFPMWMVERKT KEVP+MLAAIREEAI+G+H+P E
Sbjct:    1 MLASCKHAAFAPSSLFTPRFAHFSQKTTHASPQIRLHQAPRRPRPAFTCAASDTPTQPRVILDQKVCVQSDLPLDKTRQVHIALKAEDLGGRRRRVSGSVRVESTIDRVWHVITSYAKMHLYIPNIVESTVQHRNNVLYLDQIGVISRKLALKTRMLMRVTEDLAQRCITFSRVEGRDFSEFEGRYFLTEDEGQVIVSYDLVAVPFPLFPMWMVERKTFKEVPRMLAAIREEAIVGKHVPFE 242          
BLAST of Ggra6550.t1 vs. uniprot
Match: A0A1X6P0P5 (Polyketide_cyc domain-containing protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P0P5_PORUM)

HSP 1 Score: 144 bits (363), Expect = 2.870e-38
Identity = 77/156 (49.36%), Postives = 109/156 (69.87%), Query Frame = 0
Query:   82 VSIKAQNIGGRRRRISGTVQVETPMERVWKVITAYDKIHLYMPNILSSN-TEKRGGALYLDQTGVISRKLALNSRMLLRVSEDFTEKSITFSRVEGREFPEFEGRYSLRHGRDH--VVVEYDLVALPFPLFPMWMVERKTLKEVPKMLAAIREEAI 234
            V ++ + +GGRRRR+SG + +E P+ RVW V+T Y ++H ++PNI+SS  +E   G   LDQTG+ISR+L L SRM++RV+E   + +ITFSRV GR+F  FEG Y  R   D     ++Y L A+P   FP+ +VERK +KE+PK+LAAIR EA+
Sbjct:  137 VHLRLEALGGRRRRMSGGIFIEAPLPRVWAVLTQYARMHEFLPNIVSSAVSEGAAGETLLDQTGIISRRLQLKSRMVMRVTE-VPQSTITFSRVTGRDFTAFEGVYLFREAADAGGCQLDYSLDAVPMAFFPVALVERKIVKEMPKILAAIRREAL 291          
BLAST of Ggra6550.t1 vs. uniprot
Match: L1JG99 (Polyketide_cyc domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JG99_GUITC)

HSP 1 Score: 122 bits (307), Expect = 1.960e-30
Identity = 66/154 (42.86%), Postives = 100/154 (64.94%), Query Frame = 0
Query:   82 VSIKAQNIGGRRRRISGTVQVETPMERVWKVITAYDKIHLYMPNILSSNTEKR-GGALYLDQTGVISRKLALNSRMLLRVSEDFTEKSITFSRVEGREFPEFEGRYSLRHGRD-HVVVEYDLVALPFPLFPMWMVERKTLKEVPKMLAAIREEA 233
            ++IK + +GG RRRISG + +E P   +W V+T Y+ +H Y+PNI  S    +  G + ++Q GVIS  L + +R++L V+E+  ++ + FS+VE REF EFEG YS+   +D    +EY + ALP P+ P+ +V+ K  KEVP MLAA+R  A
Sbjct:   20 INIKLEGLGGSRRRISGGLFIEAPPRAIWDVLTNYNNLHEYIPNIAESGAILQPNGRVRIEQVGVISPTLRITTRIVLEVTEEPFQR-LKFSKVESREFIEFEGIYSITSCKDGRAYLEYSVEALPLPILPIQLVQGKIKKEVPPMLAAVRTNA 172          
BLAST of Ggra6550.t1 vs. uniprot
Match: A0A7S0QK05 (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QK05_9CRYP)

HSP 1 Score: 120 bits (302), Expect = 2.500e-30
Identity = 68/159 (42.77%), Postives = 103/159 (64.78%), Query Frame = 0
Query:   82 VSIKAQNIGGRRRRISGTVQVETPMERVWKVITAYDKIHLYMPNILSSNTEKR-GGALYLDQTGVISRKLALNSRMLLRVSEDFTEKSITFSRVEGREFPEFEGRYSLRHGRD-HVVVEYDLVALPFPLFPMWMVERKTLKEVPKMLAAIREEAILGRH 238
            V I+ + +GG RRRISG + +E P   VW V+T Y  +  Y+PNI  S +  +  G + ++Q GVIS+ L L +R++L V+E+   + +TF++VE REF EFEG Y++   +D    ++Y + ALP PL P+++V+ K  +EVP MLAA+R  AI  RH
Sbjct:   34 VFIRLEGLGGSRRRISGGLHIEAPPRAVWDVLTNYSALSEYIPNIAESGSRVQPDGRVRIEQVGVISQSLNLRTRIVLEVTEEPC-RLLTFTKVESREFIEFEGTYAIAERQDGRTFLQYSVDALPHPLLPVFLVQSKIQQEVPPMLAAVRAIAI-RRH 190          
BLAST of Ggra6550.t1 vs. uniprot
Match: A0A7S0XQK2 (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XQK2_HEMAN)

HSP 1 Score: 120 bits (302), Expect = 1.620e-29
Identity = 79/198 (39.90%), Postives = 112/198 (56.57%), Query Frame = 0
Query:   41 RRPRAAVYCTASDTPTKGLTIVETDVRVNSDLPRDKTRE-VLVSIKAQNIGGRRRRISGTVQVETPMERVWKVITAYDKIHLYMPNILSSNTEKR-GGALYLDQTGVISRKLALNSRMLLRVSEDFTEKSITFSRVEGREFPEFEGRYSLRHGRDH---VVVEYDLVALPFPLFPMWMVERKTLKEVPKMLAAIREEA 233
            R  RA    +A    T G T+  T   +   L   KT E V V IK + +GG RRRISG + +E P   +W  +T Y+K++ Y+PNI  S    +  G + ++Q GVIS  L L +R++L V ED   +++TFS+VE REF EF+G YS+           +EY + ALP PL P+ +V+ K   EVP ML+A+R  A
Sbjct:   66 RLGRATPSLSALSMQTGGSTVPRTPPSLI--LAEVKTHEGVDVDIKLEGLGGNRRRISGGLFIEAPPRAIWDTLTNYNKLNEYIPNIAESGAMLQPNGKVRIEQVGVISPTLNLKTRIVLEVDED-PYRTLTFSKVESREFIEFQGTYSISEPEKEGGLAYLEYSVEALPHPLLPVGLVQGKIRAEVPPMLSAVRTNA 260          
BLAST of Ggra6550.t1 vs. uniprot
Match: A0A7S0W4P5 (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W4P5_9CRYP)

HSP 1 Score: 117 bits (292), Expect = 6.050e-29
Identity = 64/156 (41.03%), Postives = 97/156 (62.18%), Query Frame = 0
Query:   82 VSIKAQNIGGRRRRISGTVQVETPMERVWKVITAYDKIHLYMPNILSSNTEKR-GGALYLDQTGVISRKLALNSRMLLRVSEDFTEKSITFSRVEGREFPEFEGRYSLRH---GRDHVVVEYDLVALPFPLFPMWMVERKTLKEVPKMLAAIREEA 233
            V IK + +GG RRRISG + +E P   +W  +T Y+K+H Y+PNI  S    +  G + ++Q GVIS  L L +R+ L+V E+   +++TF++V+ REF EFEG Y++     G     ++Y + ALP PL P+ +V+ K   EVP ML+A+R  A
Sbjct:   24 VDIKLEGLGGNRRRISGGLYIEAPPRAIWDTLTNYNKLHEYIPNIAESGAMLQPDGKVRIEQVGVISPTLGLKTRITLQVEEE-PYRTLTFTKVQSREFLEFEGTYTITSPPSGGGMAYLKYIVEALPHPLLPVGLVQGKIRAEVPPMLSAVRASA 178          
BLAST of Ggra6550.t1 vs. uniprot
Match: M2W8X6 (Polyketide_cyc domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W8X6_GALSU)

HSP 1 Score: 114 bits (284), Expect = 3.910e-27
Identity = 62/157 (39.49%), Postives = 99/157 (63.06%), Query Frame = 0
Query:   82 VSIKAQNIGGRRRRISGTVQVETPMERVWKVITAYDKIHLYMPNILSSNT-EKRGGALYLDQTGVISRKLALNSRMLLRVSEDFTEKSITFSRVEGREFPEFEGRYSLRHGRDHVV-VEYDLVALPFPLFPMWMVERKTLKEVPKMLAAIREEAILG 236
            + ++  ++GGR+RRISG + +E P++RVW ++T Y+K+   +PNI+ S       G   ++Q  ++SR   + SR+L+ V ED+  K++ F +++ R+F EF+G Y           +EY L A P  LFP+ +VERK LKEVP++LA IRE A+ G
Sbjct:   86 IKVRLTSLGGRKRRISGGLDIEAPVKRVWDIMTDYEKLPDILPNIVESRVIHDTVGNKQVEQVILLSRTFNIRSRILVEVLEDYM-KALRFLKIQSRDFEEFDGNYRFSEIESGFCRMEYSLDASPNLLFPISLVERKILKEVPQLLANIREVALYG 241          
BLAST of Ggra6550.t1 vs. uniprot
Match: A0A7S1EIX8 (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EIX8_HEMAN)

HSP 1 Score: 110 bits (275), Expect = 9.810e-27
Identity = 62/147 (42.18%), Postives = 90/147 (61.22%), Query Frame = 0
Query:   91 GRRRRISGTVQVETPMERVWKVITAYDKIHLYMPNILSSNTEKR-GGALYLDQTGVISRKLALNSRMLLRVSEDFTEKSITFSRVEGREFPEFEGRYSLRHGRDH---VVVEYDLVALPFPLFPMWMVERKTLKEVPKMLAAIREEA 233
            G RRRISG + +E P   +W  +T Y+K++ Y+PNI  S    +  G + ++Q GVIS  L L +R++L V ED   +++TFS+VE REF EF+G YS+           +EY + ALP PL P+ +V+ K   EVP ML+A+R  A
Sbjct:    1 GNRRRISGGLFIEAPPRAIWDTLTNYNKLNEYIPNIAESGAMLQPNGKVRIEQVGVISPTLNLKTRIVLEVDED-PYRTLTFSKVESREFIEFQGTYSISEPEKEGGLAYLEYSVEALPHPLLPVGLVQGKIRAEVPPMLSAVRTNA 146          
BLAST of Ggra6550.t1 vs. uniprot
Match: M1VE17 (Polyketide_cyc domain-containing protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1VE17_CYAM1)

HSP 1 Score: 90.9 bits (224), Expect = 3.080e-18
Identity = 58/166 (34.94%), Postives = 95/166 (57.23%), Query Frame = 0
Query:   71 DLPRDKTREVLVSIKAQNIGGRRRRISGTVQVETPMERVWKVITAYDKIHLYMPNILSS--NTEKRGGALYLDQTGVISRKLALNSRMLLRVSEDFTEKSITFSRVEGREFPEFEGRYSL-RHGRDHVVVEYDLVALPFPLFPMWMVERKTLKEVPKMLAAIREEA 233
            +L  D   E+ V +++  +  RRR I+G++ V  P   VW V+TA+D++  ++P++LSS  +TE R     L+Q   +SR+L L SR+++ V     +  + FS+ E R+F  ++G Y +         +EY L  +P  LFP+ +VERK +KEVP +L A    A
Sbjct:   94 ELRTDPPEELRVELRS--LDSRRRLITGSLNVFAPKAHVWTVLTAFDEMIEFVPHMLSSRFDTESR----LLEQVAWVSRRLRLQSRLVMEVEMLPEQGELLFSKRESRDFASWKGVYRIVPRSETETRLEYALDVVPMILFPIALVERKIMKEVPGVLRAFAARA 253          
BLAST of Ggra6550.t1 vs. uniprot
Match: SRPBCC family protein n=1 Tax=Leptolyngbya ectocarpi TaxID=1202 RepID=UPI001D14021E (SRPBCC family protein n=1 Tax=Leptolyngbya ectocarpi TaxID=1202 RepID=UPI001D14021E)

HSP 1 Score: 78.2 bits (191), Expect = 2.290e-14
Identity = 53/160 (33.12%), Postives = 88/160 (55.00%), Query Frame = 0
Query:   82 VSIKAQNIGGRRRRISGTVQVETPMERVWKVITAYDKIHLYMPNILSSNTEKR-GGALYLDQTGVISRKLALNSRMLLRVSEDFTE---KSITFSRVEGREFPEFEGRYSLRHG----RDHVVVEYDLVALPFPLFPMWMVERKTLKEVPKMLAAIREEA 233
            VS+K + +  R+R+I   V +   +E+VW+++T Y+K+  ++PN+ SS    R GG + L+Q G    +  LN +   RV  D TE   + I FS VEG +F +F GR++L+      +D  V+ Y+LV  P    P+ ++E      + + L AI + A
Sbjct:    5 VSVKTEKLTPRQRQIVAAVAIPCHLEQVWQILTDYEKLADFVPNLTSSRLLSRPGGGIRLEQIGA---QCFLNFKFCARVILDMTEVFPQEIGFSMVEG-DFKKFIGRWTLKPALLGEKDATVLSYELVVQPPLAMPVQLIEHHICNNLTQNLLAICDRA 160          
The following BLAST results are available for this feature:
BLAST of Ggra6550.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IIU43.650e-9659.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6P0P52.870e-3849.36Polyketide_cyc domain-containing protein (Fragment... [more]
L1JG991.960e-3042.86Polyketide_cyc domain-containing protein n=1 Tax=G... [more]
A0A7S0QK052.500e-3042.77Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A7S0XQK21.620e-2939.90Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A7S0W4P56.050e-2941.03Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
M2W8X63.910e-2739.49Polyketide_cyc domain-containing protein n=1 Tax=G... [more]
A0A7S1EIX89.810e-2742.18Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
M1VE173.080e-1834.94Polyketide_cyc domain-containing protein n=2 Tax=c... [more]
SRPBCC family protein n=1 Tax=Leptolyngbya ectocarpi TaxID=1202 RepID=UPI001D14021E2.290e-1433.13SRPBCC family protein n=1 Tax=Leptolyngbya ectocar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005031Coenzyme Q-binding protein COQ10, START domainPFAMPF03364Polyketide_cyccoord: 102..221
e-value: 1.0E-7
score: 32.2
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 95..234
e-value: 1.1E-13
score: 53.2
NoneNo IPR availablePANTHERPTHR34060POLYKETIDE CYCLASE / DEHYDRASE AND LIPID TRANSPORT PROTEINcoord: 22..233
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 95..233

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000081_piloncontigtig00000081_pilon:245318..246046 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6550.t1Ggra6550.t1Gracilaria gracilis GNS1m malemRNAtig00000081_pilon 245318..246046 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6550.t1 ID=Ggra6550.t1|Name=Ggra6550.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=243bp
MLAVRNSAAFASSVLYTHQSPSFTNGVCRTPNPLHLHRAARRPRAAVYCT
ASDTPTKGLTIVETDVRVNSDLPRDKTREVLVSIKAQNIGGRRRRISGTV
QVETPMERVWKVITAYDKIHLYMPNILSSNTEKRGGALYLDQTGVISRKL
ALNSRMLLRVSEDFTEKSITFSRVEGREFPEFEGRYSLRHGRDHVVVEYD
LVALPFPLFPMWMVERKTLKEVPKMLAAIREEAILGRHIPIE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005031COQ10_START
IPR023393START-like_dom_sf