Ggra654.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra654.t1
Unique NameGgra654.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length992
Homology
BLAST of Ggra654.t1 vs. uniprot
Match: A0A2V3ICW7 (Uma2 domain-containing protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICW7_9FLOR)

HSP 1 Score: 350 bits (899), Expect = 1.600e-107
Identity = 180/277 (64.98%), Postives = 221/277 (79.78%), Query Frame = 0
Query:   69 SSFQELSPPITPDGQKLGTLHLQPATVQELFDIDRFIYGDYDLVDGLLIWRGMSERDRNKQQAKNLLHLFQQREQANPTSNRVATVQASIAIPTKRYLRS-QPSSSSAPPLSEDSDESSAPRNGHPNYSVLTADLAIGQKLSEEERRKLSPASKNITFPLLNPKRPPEAVYECSSTKESRDMKEKPDLYAAAEIPKYIVLNNRVRSKRSQPAVHEGNLRDGKYEGLNMPLRGTDKVDLGPIGILDAKDCINPGDVDGRVHREGREQRMRRQEAEKRK 344
            S FQE  P    D +KLG LHLQPATV+ELFDIDRF YG+YDLV+GLLIWRGMSE +RNK+QAK+LL+ FQ+ EQ  PT+ RVAT++A+IAIPTKRYL S QPSSS+APP SEDS++S  PR GHP+YSV+ AD A+G+++S E+R  LSP S  ITFPL   + PPE V E +ST   RDM EK +LYA  +IPKYI ++N  R+K  QPAV+EGNLR+GKYEG+  PLRG D+V+LGPIG+L AKDCI+PG  D RVHREGREQRM+R+EAEK++
Sbjct:   39 SLFQEELPAAALDRRKLGALHLQPATVEELFDIDRFKYGEYDLVEGLLIWRGMSESNRNKEQAKHLLYRFQRAEQDKPTTRRVATLEATIAIPTKRYLMSHQPSSSNAPPQSEDSEKSPTPRRGHPDYSVVRADFAVGERISNEDRALLSPGSSKITFPLK--RTPPEVVVENTSTNGRRDMVEKQELYAQRKIPKYITIHNDARAKNPQPAVYEGNLRNGKYEGMEKPLRGEDEVNLGPIGVLKAKDCIHPGSPDARVHREGREQRMKREEAEKKR 313          
BLAST of Ggra654.t1 vs. uniprot
Match: A0A2V3IBX3 (Uma2 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBX3_9FLOR)

HSP 1 Score: 276 bits (705), Expect = 8.290e-81
Identity = 142/225 (63.11%), Postives = 179/225 (79.56%), Query Frame = 0
Query:  121 MSERDRNKQQAKNLLHLFQQREQANPTSNRVATVQASIAIPTKRYLRS-QPSSSSAPPLSEDSDESSAPRNGHPNYSVLTADLAIGQKLSEEERRKLSPASKNITFPLLNPKRPPEAVYECSSTKESRDMKEKPDLYAAAEIPKYIVLNNRVRSKRSQPAVHEGNLRDGKYEGLNMPLRGTDKVDLGPIGILDAKDCINPGDVDGRVHREGREQRMRRQEAEKRK 344
            MSE +RNK+QAK+LL+ FQ+ EQ  PT+ RVAT++A+IAIPTKRYL S QPSSS+APP SEDS++S  PR GHP+YSV+ AD A+G+++S E+R  LSP S  ITFPL   + PPE V E +ST   RDM EK +LYA  +IPKYI ++N  R+K  QPAV+EGNLR+GKYEG+  PLRG D+V+LGPIG+L AKDCI+PG  D RVHREGREQRM+R+EAEK++
Sbjct:    1 MSESNRNKEQAKHLLYRFQRAEQDKPTTRRVATLEATIAIPTKRYLMSHQPSSSNAPPQSEDSEKSPTPRRGHPDYSVVRADFAVGERISNEDRALLSPGSSKITFPLK--RTPPEVVVENTSTNGRRDMVEKQELYAQRKIPKYITIHNDARAKNPQPAVYEGNLRNGKYEGMEKPLRGEDEVNLGPIGVLKAKDCIHPGSPDARVHREGREQRMKREEAEKKR 223          
BLAST of Ggra654.t1 vs. uniprot
Match: A0A2V3IBT3 (Uncharacterized protein n=4 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBT3_9FLOR)

HSP 1 Score: 168 bits (426), Expect = 2.150e-40
Identity = 127/434 (29.26%), Postives = 213/434 (49.08%), Query Frame = 0
Query:  531 LMKSKKENWEDMIEHILVVDPSFFDGPDGRMEDPTKKKRGSHFYKGLSLTTDNCEDIQLIYDVRYRAASVFQKK-SDAFDGVRSVAGQLMRLAIASKLMDRHEGYIKNRLFRFLSDFEVVEYFVNHFVLTTSPYTVASKCNFLLRLISVGETQLQD-AQGMSAKFEKVATYLRSMAASSKKEGRAK-RRRERLIDISSDKHNLLYDSDLRKAFSLAKHQLEDVMKTFRLDEHKKKDSFNARLREKPSLVDKWFINFLAAVVFSCGGQRPQAVSSIQVPTKHELDRVESTAF-GDFFSLRSNFDKRERSLNFPAVMLPVSMKPLVNFHVKVMRTFVCRRMNISFAAESNPLLLHSHEGTGLTTRSITNSIRMFMTNINKRYEFVTSMVVRASYATSMVHCFKTNKIGEGLSEEKFLDLLANRMNTSAEQLKDAYV 960
            L +S +  W + + H+    P  F+  + R   P     G+ ++KG+  T  NC  ++ +Y+  Y+       K + AF  + +   Q +R AI +    R + + ++ LFR L+D +VV  F+   +L +SP TV ++   + R+  VG     D A GM  K   V   L+ M  +S+   R + + ++ LI+ S  +H      DL K  +L    L   M++F     K++   +A  +   S +  W +NF+  ++   GGQRPQ  S +Q+P + E  ++   A    +  LR+  +KR R ++ P ++LPV++ P + FHVK MR  +      S      PL + S    G     +T  +++F+++       VTSM +R  YAT M+  ++   I   L+E  FL+ LA +MNTS EQLK  YV
Sbjct:  130 LERSYESRWYEQLRHLEKCHPKLFELLEVRDAGP-----GTFYFKGIGATVKNCLGLRRVYETYYKPRLQNNGKGAAAFTHLSTTVSQFLRWAICTSTCSRKDVWKEHVLFRALADQKVVNRFIEMLMLRSSPGTVKNRITSMKRVCDVGVIISGDTAIGMRLKL--VLIVLQHMENASRCAYRKRCQAKKDLINRSVPRH-----LDLIKRRALG--ALNFTMRSFW--HRKQRSGTDAARKSMRSYLQIWNMNFMGLIMLVSGGQRPQVFSGLQLPNEEEFQQLTFQAEQSSYIELRTGTEKRPRYIDLPFMILPVTVMPYLTFHVKYMRPEIQEAAGRSDEGLFEPLFIDSKTALGFKPSQVTRRLQLFLSSHGIERGCVTSMDLRRDYATRMLRNYRQKCIFSNLTENAFLEKLAQQMNTSVEQLKRTYV 547          
BLAST of Ggra654.t1 vs. uniprot
Match: A0A2V3IF83 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF83_9FLOR)

HSP 1 Score: 94.0 bits (232), Expect = 3.610e-19
Identity = 51/92 (55.43%), Postives = 68/92 (73.91%), Query Frame = 0
Query:  154 VQASIAIPTKRYLRSQPSSSSAPPLSEDSDESSAPRNGHPNYSVLTADLAIGQKLSEEERRKLSPASKNITFPLLNPKRPPEAVYECSSTKE 245
            + A++AIP KRY R QPSSS+  PLS+DS++SS PR G+P YSV++ DLAI  KLS+E R ++SPAS+NI F L +P   P+ V E SST +
Sbjct:    1 MDAAVAIPIKRYPRFQPSSSNDAPLSDDSNDSSTPRRGNPKYSVVSPDLAIANKLSDEPRSRISPASQNIRFRLNHP---PQFVLESSSTNK 89          
The following BLAST results are available for this feature:
BLAST of Ggra654.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3ICW71.600e-10764.98Uma2 domain-containing protein n=3 Tax=Gracilariop... [more]
A0A2V3IBX38.290e-8163.11Uma2 domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IBT32.150e-4029.26Uncharacterized protein n=4 Tax=Gracilariopsis cho... [more]
A0A2V3IF833.610e-1955.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 328..416
NoneNo IPR availableGENE3D1.10.40.30coord: 14..73
e-value: 7.7E-9
score: 37.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 468..484
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 451..492
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 451..467
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 322..428
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000947_piloncontigtig00000947_pilon:14041..24628 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra654.t1Ggra654.t1Gracilaria gracilis GNS1m malemRNAtig00000947_pilon 14041..24628 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra654.t1 ID=Ggra654.t1|Name=Ggra654.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=992bp
MKELEEPIGASQIGSMAGVQAGGDRQQLHEAISVHSMAAAKRVKQQSEGR
RTQMHSDKSTPAERIQTGSSFQELSPPITPDGQKLGTLHLQPATVQELFD
IDRFIYGDYDLVDGLLIWRGMSERDRNKQQAKNLLHLFQQREQANPTSNR
VATVQASIAIPTKRYLRSQPSSSSAPPLSEDSDESSAPRNGHPNYSVLTA
DLAIGQKLSEEERRKLSPASKNITFPLLNPKRPPEAVYECSSTKESRDMK
EKPDLYAAAEIPKYIVLNNRVRSKRSQPAVHEGNLRDGKYEGLNMPLRGT
DKVDLGPIGILDAKDCINPGDVDGRVHREGREQRMRRQEAEKRKQEEKEK
RRKAEEREQEEKEKRRKAEEREQEEKKKRQQAEEREQEEKKKRQKAEEKR
QKAEEREQKGKRKRREREAKIKEQRELMRKAGLLSPTVMIRRAIIPESDS
EDERLHHYGHSSDDDTDQFDPSQGFCTPLSAQHDDNNDPRAAFRRRLNVQ
RRSLPAPTPQHVQIFRSKRRRLESPRAAKELMKSKKENWEDMIEHILVVD
PSFFDGPDGRMEDPTKKKRGSHFYKGLSLTTDNCEDIQLIYDVRYRAASV
FQKKSDAFDGVRSVAGQLMRLAIASKLMDRHEGYIKNRLFRFLSDFEVVE
YFVNHFVLTTSPYTVASKCNFLLRLISVGETQLQDAQGMSAKFEKVATYL
RSMAASSKKEGRAKRRRERLIDISSDKHNLLYDSDLRKAFSLAKHQLEDV
MKTFRLDEHKKKDSFNARLREKPSLVDKWFINFLAAVVFSCGGQRPQAVS
SIQVPTKHELDRVESTAFGDFFSLRSNFDKRERSLNFPAVMLPVSMKPLV
NFHVKVMRTFVCRRMNISFAAESNPLLLHSHEGTGLTTRSITNSIRMFMT
NINKRYEFVTSMVVRASYATSMVHCFKTNKIGEGLSEEKFLDLLANRMNT
SAEQLKDAYVHIRRVDYEKGVKLAMEHFLVVMDEDKDENDM*
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