Ggra6536.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6536.t1
Unique NameGgra6536.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length302
Homology
BLAST of Ggra6536.t1 vs. uniprot
Match: A0A2V3IER0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IER0_9FLOR)

HSP 1 Score: 377 bits (967), Expect = 1.930e-128
Identity = 197/307 (64.17%), Postives = 232/307 (75.57%), Query Frame = 0
Query:    2 DLFSAKPEITTAPPLPPYSDADAALHDTIASFIHMTDKMEHILPPDLNLATIQQHSSSDEL----FTPAATPASTAPPSFNLSSSSLSTSPLPNTLAPTSYEAAQPDSSAVCIATINNALHAAISAQATAPLA---QCQTPSCSPCTVRNLSPLNSVRKRKSTRKPKTYSKPVASRFCHICSRMPRKGQGSATCRRMREGYCRKIVCEQCVREQGWDYDAIAQNPNDWLCPHCADICPPRSQCHIYNRINARRKKVGQKRPNSVATALASSDALMRPYAHLLEPSAIQVIQPPPNFRLNLPPHYSQP 301
            D+F+ KP+++ +P L   +D DA LH TI+S +HMTD++EHILPPDLNL  +   S +  L     TP +  A +AP SF  +S+  ST P      P     ++P+ S + I+TIN+A HAA S  A AP+       TPSCSPC VR L  LN+ RKRKSTRKPKTYSKPVASRFCHICSRMPRKGQGSATCRRMREGYCRKIVCEQC+REQGWDYDAI+ NP+ WLCPHCA+ICPPRSQCHIYNRINARRK+VGQK+ NSVA A ASSD L+ PYAHL E  A+Q+IQPPPNFRLNLPP YS+P
Sbjct:    3 DMFTVKPDLSASPTLH-LTDTDAVLHQTISSLMHMTDEVEHILPPDLNLTPVNLISPAIPLPHDSLTPPSFTACSAPNSFAPTSACTSTIPSQQHSTPAYQSYSRPELSTLSISTINSAYHAA-SVAAGAPVGGPWPLSTPSCSPCAVRELPALNTPRKRKSTRKPKTYSKPVASRFCHICSRMPRKGQGSATCRRMREGYCRKIVCEQCIREQGWDYDAISANPDQWLCPHCAEICPPRSQCHIYNRINARRKRVGQKQNNSVAAACASSDMLLAPYAHLFEQPAVQLIQPPPNFRLNLPPQYSKP 307          
BLAST of Ggra6536.t1 vs. uniprot
Match: A0A1X6P4T1 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P4T1_PORUM)

HSP 1 Score: 107 bits (268), Expect = 2.050e-22
Identity = 44/83 (53.01%), Postives = 55/83 (66.27%), Query Frame = 0
Query:  167 VASRFCHICSRMPRKGQGSATCRRMREGYCRKIVCEQCVREQGWDYDAIAQNPNDWLCPHCAD-ICPPRSQCHIYNRINARRK 248
            V SRFCH+CSR+P+K      C  +R G CRK VCE+C  + GWD+ A     + W+CPHCAD  CPPR+QCH Y R N RR+
Sbjct:  811 VPSRFCHVCSRVPKKSSHHIVCANIRGGGCRKTVCERCFADNGWDWGAAVAKGSAWVCPHCADGECPPRAQCHTYARTNGRRR 893          
BLAST of Ggra6536.t1 vs. uniprot
Match: A0A7S1TIE4 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIE4_9RHOD)

HSP 1 Score: 97.8 bits (242), Expect = 3.490e-20
Identity = 46/114 (40.35%), Postives = 64/114 (56.14%), Query Frame = 0
Query:  138 SPCTVRNLSPLN---SVRKRKSTRKPKTYSKPVASRFCHICSRMPRKGQGSATCRRMREGYCRKIVCEQCVREQGWDYDAIAQNPNDWLCPHCADICPPRSQCHIYNRINARRK 248
            +P  V   +P N   +V K     K K Y K + S  CHIC R       +  C  +R G CRK+VC++C     WD+++ A+  + WLC HC ++CPPR+QC IY R+N RRK
Sbjct:  138 TPMDVEGSTPANENQTVLKPVRQFKVKKYFKRIPSHHCHICRRSALMIP-TVVCLNIRGGLCRKVVCQKCFETYQWDFESAAKEDSGWLCTHCREVCPPRAQCFIYQRVNTRRK 250          
BLAST of Ggra6536.t1 vs. uniprot
Match: A0A7S1XH97 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XH97_9RHOD)

HSP 1 Score: 97.8 bits (242), Expect = 1.390e-19
Identity = 46/114 (40.35%), Postives = 64/114 (56.14%), Query Frame = 0
Query:  138 SPCTVRNLSPLN---SVRKRKSTRKPKTYSKPVASRFCHICSRMPRKGQGSATCRRMREGYCRKIVCEQCVREQGWDYDAIAQNPNDWLCPHCADICPPRSQCHIYNRINARRK 248
            +P  V   +P N   +V K     K K Y K + S  CHIC R       +  C  +R G CRK+VC++C     WD+++ A+  + WLC HC ++CPPR+QC IY R+N RRK
Sbjct:  235 TPMDVEGSTPANENQTVLKPVRQFKVKKYFKRIPSHHCHICRRSALMIP-TVVCLNIRGGLCRKVVCQKCFETYQWDFESAAKEDSGWLCTHCREVCPPRAQCFIYQRVNTRRK 347          
BLAST of Ggra6536.t1 vs. uniprot
Match: A0A5J4Z5T1 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z5T1_PORPP)

HSP 1 Score: 97.8 bits (242), Expect = 2.670e-19
Identity = 48/126 (38.10%), Postives = 70/126 (55.56%), Query Frame = 0
Query:  142 VRNLSPLNSVRKRKSTRKPKTYSKPVASRFCHICSRMPRKGQGSATCRRMREGYCRKIVCEQCVREQGWDYDAIAQNPNDWLCPHCADICPPRSQCHIYNRINARRKKVGQKRPNSVATALASSDA 267
            V++ S L  + +  S  K + YS   ASRFCHIC+R     + + +C     G CRKI+CE+C  + GWD++A ++    W C HC  ICP R+QC+ Y R N RR+  G +R   +   L +  A
Sbjct:  313 VKDASVLKELEQLASKPKIRRYSNSTASRFCHICARSMDSVR-AISCFNTLFGVCRKIICEKCFEQYGWDWEAASKPGARWSCAHCKGICPERAQCNTYKRTNQRRRLKGLERRKQLEELLIAGGA 437          
BLAST of Ggra6536.t1 vs. uniprot
Match: A0A7S1TN34 (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TN34_9RHOD)

HSP 1 Score: 89.7 bits (221), Expect = 2.750e-16
Identity = 40/98 (40.82%), Postives = 59/98 (60.20%), Query Frame = 0
Query:  169 SRFCHICSRMPRKGQGSATCRRMREGYCRKIVCEQCVREQGWDYDAIAQNPNDWLCPHCADICPPRSQCHIYNRINAR---RKKVGQKRPNSVATALA 263
            S +CH+C R  +  +  A C +++ G+CRK+VCE+C  + GW++         WLCPHC  ICPPR+ C+IY R N     RK+  +K   +VAT+ A
Sbjct:  648 SHYCHVCLRHSKLVRQVA-CSKLQLGHCRKVVCERCFAQFGWNWALACDESTAWLCPHCLGICPPRATCNIYKRTNRELQARKRATRKLSATVATSAA 744          
BLAST of Ggra6536.t1 vs. uniprot
Match: A0A5J4YS79 (Uncharacterized protein n=2 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YS79_PORPP)

HSP 1 Score: 87.0 bits (214), Expect = 8.970e-16
Identity = 34/80 (42.50%), Postives = 49/80 (61.25%), Query Frame = 0
Query:  169 SRFCHICSRMPRKGQGSATCRRMREGYCRKIVCEQCVREQGWDYDAIAQNPNDWLCPHCADICPPRSQCHIYNRINARRK 248
            SRFCHIC++   K    A C  ++ G CRK++CE+C  E GWD++      N+W C HC  ICP R+QC++Y +   R +
Sbjct:  188 SRFCHICTKSA-KVVRQAVCYNVQTGSCRKVICEKCFAENGWDFELATAPDNEWYCCHCMRICPTRAQCNVYKKNTQRTR 266          
BLAST of Ggra6536.t1 vs. uniprot
Match: A0A7S1TKP7 (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKP7_9RHOD)

HSP 1 Score: 85.9 bits (211), Expect = 1.060e-15
Identity = 39/93 (41.94%), Postives = 54/93 (58.06%), Query Frame = 0
Query:  169 SRFCHICSRMPRKGQGSATCRRMREGYCRKIVCEQCVREQGWDYDAIAQNPNDWLCPHCADICPPRSQCHIYNRIN----ARRKKVGQKRPNS 257
            S+FCHIC+R   K    A CR + +  CRK++CE+C  + GWD++      + W C HCA+ CP  +QC  YNR N    ARRK+   +R  S
Sbjct:  142 SKFCHICTRSY-KAVRQAVCRNLVKNTCRKVICEKCFEDFGWDFELAISEDSGWCCCHCAEKCPSTAQCTHYNRANPKVEARRKRQRVERKES 233          
BLAST of Ggra6536.t1 vs. uniprot
Match: A0A1X6P314 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P314_PORUM)

HSP 1 Score: 74.3 bits (181), Expect = 3.140e-11
Identity = 50/130 (38.46%), Postives = 62/130 (47.69%), Query Frame = 0
Query:  125 ATAPLAQCQTPSCSPCTVRNLSPLNSVRKRKSTRKPKTYSKPVASRFCHICSRMPRKGQGSATCRRMREGYCRKIVCEQCVREQG--------WDYDAIAQNPNDWLCPHCADICPPRSQCHIYNRINAR 246
            AT   A  +TP+ S   VR + P    RKR+      T+SKPV SRFCH+CSR     +            CRK+VC++C    G        WD  A+A  P  W C HC   CP R+QC  Y R N R
Sbjct:  250 ATGANATARTPA-SETPVRTVPP---PRKRRKA----TFSKPVPSRFCHLCSRTSPAVRHIVCGALATSSTCRKVVCDRCFTTAGAAGINGVTWD-QAVAAGPA-WRCCHCVGSCPDRAQCRNYTRTNER 369          
BLAST of Ggra6536.t1 vs. uniprot
Match: A0A7S1TNV5 (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TNV5_9RHOD)

HSP 1 Score: 70.5 bits (171), Expect = 1.430e-10
Identity = 29/76 (38.16%), Postives = 45/76 (59.21%), Query Frame = 0
Query:  169 SRFCHICSRMPRKGQGSATCRRMREGYCRKIVCEQCVREQGWDYDAIAQNPNDWLCPHCADICPPRSQCHIYNRIN 244
            S+FCH+CSR   K +         +G CRK+VC++C  E G+D++    +   W C HC  ICPP+++C +Y+  N
Sbjct:  165 SKFCHVCSRNGPKVRMLVCVNYFVDGRCRKVVCDRCFAESGYDFEDPILSLT-WTCFHCQGICPPKARCKVYSSAN 239          
The following BLAST results are available for this feature:
BLAST of Ggra6536.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A2V3IER01.930e-12864.17Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6P4T12.050e-2253.01Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1TIE43.490e-2040.35Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S1XH971.390e-1940.35Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4Z5T12.670e-1938.10Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S1TN342.750e-1640.82Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A5J4YS798.970e-1642.50Uncharacterized protein n=2 Tax=Porphyridium purpu... [more]
A0A7S1TKP71.060e-1541.94Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A1X6P3143.140e-1138.46Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1TNV51.430e-1038.16Hypothetical protein n=1 Tax=Erythrolobus australi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000081_piloncontigtig00000081_pilon:200277..201182 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6536.t1Ggra6536.t1Gracilaria gracilis GNS1m malemRNAtig00000081_pilon 200277..201182 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6536.t1 ID=Ggra6536.t1|Name=Ggra6536.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=302bp
MDLFSAKPEITTAPPLPPYSDADAALHDTIASFIHMTDKMEHILPPDLNL
ATIQQHSSSDELFTPAATPASTAPPSFNLSSSSLSTSPLPNTLAPTSYEA
AQPDSSAVCIATINNALHAAISAQATAPLAQCQTPSCSPCTVRNLSPLNS
VRKRKSTRKPKTYSKPVASRFCHICSRMPRKGQGSATCRRMREGYCRKIV
CEQCVREQGWDYDAIAQNPNDWLCPHCADICPPRSQCHIYNRINARRKKV
GQKRPNSVATALASSDALMRPYAHLLEPSAIQVIQPPPNFRLNLPPHYSQ
P*
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