Ggra6527.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6527.t1
Unique NameGgra6527.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length505
Homology
BLAST of Ggra6527.t1 vs. uniprot
Match: A0A7E5WTH0 (myoneurin-like n=1 Tax=Trichoplusia ni TaxID=7111 RepID=A0A7E5WTH0_TRINI)

HSP 1 Score: 64.3 bits (155), Expect = 1.930e-7
Identity = 37/120 (30.83%), Postives = 53/120 (44.17%), Query Frame = 0
Query:  383 DPLVCTHCPAMFSSDRARSIHVMRIHSVQVPVETDLSACGGVPD-------KQGKRRRAGTQVGKPKMHKCPNCDYMSRWKGNISRHVNAVHLQLRQFPCDICDRRFNTASNLTVHKLTH 495
            + ++C  C  +F+      +H+      Q P                    +Q KR+R        K H C +CDY S  K ++  H+N VHL +R F CDIC + F   SNLT H +TH
Sbjct:  165 EAIICDICGKIFNKSSTLKVHLSCHKEKQCPXXXXXXXXXXXXXXXXXXXXQQLKRKRI------VKYHLCVHCDYRSLNKNSLEAHMNKVHLNIRPFVCDICQKGFYKKSNLTQHYVTH 278          
BLAST of Ggra6527.t1 vs. uniprot
Match: A0A6A7G8X9 (Zinc finger protein 510 (Fragment) n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G8X9_9CRUS)

HSP 1 Score: 62.4 bits (150), Expect = 1.180e-6
Identity = 32/114 (28.07%), Postives = 59/114 (51.75%), Query Frame = 0
Query:  387 CTHCPAMFSSDRARSIHVMRIHSVQVPVETDLSACGGVPDKQ-----GKRRRAGTQVGKPKMHKCPNCDYMSRWKGNISRHVNAVHLQLRQFPCDICDRRFNTASNLTVHKLTH 495
            C  C A+ S++    +H+ ++HS  V  + D      +  K+       ++   T    PK H C  C Y ++ K  + RHVN +HL+LR++ C++C+++F +  +  +H L H
Sbjct:  215 CFVCSAILSTNIGLKLHIAQMHSDIVKGKGDKHFLCSICSKKFVSCNHLKQHMKTHTA-PKAHHCSQCSYSAQNKEAVRRHVNRIHLKLRKYECNMCNKKFFSQPDRKLHMLRH 327          
BLAST of Ggra6527.t1 vs. uniprot
Match: zinc finger and BTB domain-containing protein 24-like n=1 Tax=Spodoptera litura TaxID=69820 RepID=UPI000C142487 (zinc finger and BTB domain-containing protein 24-like n=1 Tax=Spodoptera litura TaxID=69820 RepID=UPI000C142487)

HSP 1 Score: 60.8 bits (146), Expect = 2.480e-6
Identity = 25/59 (42.37%), Postives = 35/59 (59.32%), Query Frame = 0
Query:  442 KMHKCPNCDYMSRWKGNISRHVNAVHLQLRQFPCDICDRRFNTASNLTVHKLTHLRDSD 500
            K + C +CDY S  K  +  H+N +HL +R + CDIC + F   S+LT H LTH +  D
Sbjct:  224 KYYTCDSCDYRSLNKNTLEAHINKIHLNIRPYICDICQKGFYKKSHLTQHFLTHEKVKD 282          
BLAST of Ggra6527.t1 vs. uniprot
Match: gastrula zinc finger protein XlCGF57.1-like isoform X1 n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103BAC1D (gastrula zinc finger protein XlCGF57.1-like isoform X1 n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103BAC1D)

HSP 1 Score: 59.7 bits (143), Expect = 6.290e-6
Identity = 26/50 (52.00%), Postives = 31/50 (62.00%), Query Frame = 0
Query:  446 CPNCDYMSRWKGNISRHVNAVHLQLRQFPCDICDRRFNTASNLTVHKLTH 495
            C  C Y S  K ++  HVN VHLQ+R F C+ICD+ F   SNLT H L H
Sbjct:  240 CNLCSYRSLNKNSLEAHVNKVHLQVRPFICEICDKAFYRKSNLTEHALIH 289          
The following BLAST results are available for this feature:
BLAST of Ggra6527.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7E5WTH01.930e-730.83myoneurin-like n=1 Tax=Trichoplusia ni TaxID=7111 ... [more]
A0A6A7G8X91.180e-628.07Zinc finger protein 510 (Fragment) n=2 Tax=Hironde... [more]
zinc finger and BTB domain-containing protein 24-like n=1 Tax=Spodoptera litura TaxID=69820 RepID=UPI000C1424872.480e-642.37zinc finger and BTB domain-containing protein 24-l... [more]
gastrula zinc finger protein XlCGF57.1-like isoform X1 n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI00103BAC1D6.290e-652.00gastrula zinc finger protein XlCGF57.1-like isofor... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 324..347
e-value: 0.52
score: 19.4
coord: 473..495
e-value: 0.0019
score: 27.4
coord: 355..378
e-value: 0.049
score: 22.8
coord: 385..408
e-value: 1.9
score: 17.5
coord: 444..467
e-value: 0.047
score: 22.8
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 473..495
e-value: 1.9E-5
score: 24.9
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 326..347
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 475..495
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 357..378
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 387..408
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 324..352
score: 8.517231
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 473..500
score: 11.052769
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 440..502
e-value: 1.5E-12
score: 49.3
coord: 352..421
e-value: 1.4E-9
score: 39.9
NoneNo IPR availablePFAMPF13909zf-H2C2_5coord: 444..467
e-value: 7.9E-7
score: 28.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 227..249
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35
NoneNo IPR availablePANTHERPTHR24379:SF67BLOODY FINGERS-RELATEDcoord: 319..495
NoneNo IPR availablePANTHERPTHR24379KRAB AND ZINC FINGER DOMAIN-CONTAININGcoord: 319..495
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 442..495

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000081_piloncontigtig00000081_pilon:157043..158557 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6527.t1Ggra6527.t1Gracilaria gracilis GNS1m malemRNAtig00000081_pilon 157043..158557 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6527.t1 ID=Ggra6527.t1|Name=Ggra6527.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=505bp
MESRYANIPPNSSRVIPDRSSPPFVSGSHGTGGQYPPSHNRDRLPSVRSI
VMGTSLAEATSNAIQLPPPRPVPYQRAIEVLPSPRYYSNSAYGQQSNVWS
HGYYDDNRNPSVFNQVHGSFPQENAAYNVYPQHIQVPPPPAVVTTQSTPM
DSNMGYRVNTVPMPRLMEPTVNPYYRSPHMHMADTRTPPVQDRYATAGTA
PHVPTAGIQNTPRTMMTAGCANLESTGERLGPRNGANEQGLGSSLSQHHG
IPHSLPVGASSYPYASMYYQQGGYQYQQLDNAARESQPSTEPNVRYIELG
SYGITEAFLSHITARAWMDTENSIRCTECEEEFGNVASWKRHASRSHRKV
RTPKVKCPICSIEVKSEGNIKRHLKTVHKSVPDPLVCTHCPAMFSSDRAR
SIHVMRIHSVQVPVETDLSACGGVPDKQGKRRRAGTQVGKPKMHKCPNCD
YMSRWKGNISRHVNAVHLQLRQFPCDICDRRFNTASNLTVHKLTHLRDSD
PGTP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf