Ggra6508.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6508.t1
Unique NameGgra6508.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length160
Homology
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BLAST of Ggra6508.t1 vs. uniprot
Match: A0A2V3J557 (Alpha-type protein kinase domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J557_9FLOR)

HSP 1 Score: 106 bits (265), Expect = 7.650e-26
Identity = 57/145 (39.31%), Postives = 88/145 (60.69%), Query Frame = 0 
Query:    1 MREAKDCSKVVEAFLNEVDTGGWKVKVLMPRKMKMNHCHGHSA----IVEPFLEDYYTFYKSAKDIRKMGSHSSDKVLQALLHFSIIKSKKKQMMTNLEGYVDEKKKTIFLSGPVIRKDGQESSHGKEADISTFLKRHECSSMCK 141
            +REAK+ ++VV AF+NEVDT GW V+V +PR  ++ +  GH A    +VEP+L  + +FY++A DI    + +  +V+ ALLHFSI  ++ + ++ +L+G VD + K I LS P +    +         I +FL  H CS MCK
Sbjct:   45 VREAKESARVVRAFMNEVDTRGWTVRVAIPRITEV-YSEGHDAERTVLVEPYLSHFESFYETADDIAYGSNRAYHRVIHALLHFSIWHTRGRGILADLKGSVDREMKEIILSAPSVIHHAEREHRHSGTGIFSFLSEHVCSRMCK 188
The following BLAST results are available for this feature:
BLAST of Ggra6508.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J5577.650e-2639.31Alpha-type protein kinase domain-containing protei... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004166MHCK/EF2 kinasePFAMPF02816Alpha_kinasecoord: 6..140
e-value: 2.1E-11
score: 44.3
IPR004166MHCK/EF2 kinasePROSITEPS51158ALPHA_KINASEcoord: 1..148
score: 10.62442
NoneNo IPR availableGENE3D3.20.200.10MHCK/EF2 kinasecoord: 52..154
e-value: 4.7E-12
score: 47.9
IPR011009Protein kinase-like domain superfamilySUPERFAMILY56112Protein kinase-like (PK-like)coord: 31..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000074_piloncontigtig00000074_pilon:573295..573774 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6508.t1Ggra6508.t1Gracilaria gracilis GNS1m malemRNAtig00000074_pilon 573295..573774 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6508.t1 ID=Ggra6508.t1|Name=Ggra6508.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=160bp
MREAKDCSKVVEAFLNEVDTGGWKVKVLMPRKMKMNHCHGHSAIVEPFLE
DYYTFYKSAKDIRKMGSHSSDKVLQALLHFSIIKSKKKQMMTNLEGYVDE
KKKTIFLSGPVIRKDGQESSHGKEADISTFLKRHECSSMCKKFEEPKSPR
RKRFLFIPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004166MHCK_EF2_kinase
IPR011009Kinase-like_dom_sf