Ggra6507.t2 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra6507.t2 vs. uniprot
Match: A0A2V3J5B0 (Splicing factor 3B subunit 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5B0_9FLOR) HSP 1 Score: 511 bits (1317), Expect = 1.110e-167 Identity = 241/329 (73.25%), Postives = 287/329 (87.23%), Query Frame = 0
Query: 10 GALRVYRIDKKTRKPVFLHETLIEKPSYAVVAFRDMILVGIGRAIRLYDLGKRKLLKKGECKQAVRNIVTAIAVSGGDRVFVGDVQESVTLFKYIAGSGLGRGMDYNSVNAERLGGRFVCIANDTLCRWIVSLVALDYSTVCGSDKFGNVFVLRIPPELASEAEELMGVVAIEKGGGIGGSSRGMHQLRVEACVHVGGTVVGLSLGRLNGRTTIEMGPQNEDDESQDAIIYATMDGAVGVLIPLAAWNDAEFVRLVEHEMRRRYTTICARDHLAYRSSFYAVKNVVDGDLCEMLGALPHEDIVKCCNVIGQPVSEVLTRIEELRESWLG 338
GALRVYRI++K+ +P+F+HET+IE+PS+A+ AFRDM+ VGIGR+IRLYDLGK++LL+KGE K AVRN VTAIAVSGGDR+FVGDVQESVTLFKYIAG GRG+DY V ER GGR VCIANDTLCRW+VSLVALDYSTVCGSDKFGN+FVLR+P ELAS +ELMGV IE G GIGGS +G HQL +EACVHVG TV+ L+LG LNGRT +EMG + ++ Q+A++YATMDGAVGVL PLA WN+AEF RLVEHEMRRRY+T+C RDHLAYRS+FYA+KNVVDGDLCEML ALPHE+++KCC+ IGQ VS+V+ RI+ELRE+W+G
Sbjct: 1049 GALRVYRIERKSARPIFVHETVIEEPSFALAAFRDMVAVGIGRSIRLYDLGKQRLLRKGEYKYAVRNRVTAIAVSGGDRMFVGDVQESVTLFKYIAGWETGRGVDYGRVGMERHGGRLVCIANDTLCRWVVSLVALDYSTVCGSDKFGNIFVLRLPQELASMGDELMGVATIENGAGIGGSHKGAHQLHLEACVHVGATVISLTLGHLNGRTELEMGLEGKEKSKQEAVVYATMDGAVGVLAPLATWNEAEFARLVEHEMRRRYSTVCGRDHLAYRSAFYALKNVVDGDLCEMLRALPHEEVIKCCSSIGQSVSDVMKRIDELRETWIG 1377
BLAST of Ggra6507.t2 vs. uniprot
Match: R7Q6T1 (Putative splicing factor 3B, subunit 3, SF3B3 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6T1_CHOCR) HSP 1 Score: 238 bits (607), Expect = 5.250e-67 Identity = 136/326 (41.72%), Postives = 190/326 (58.28%), Query Frame = 0
Query: 12 LRVYRIDKKTRKPVFLHETLIEKPSYAVVAFRDMILVGIGRAIRLYDLGKRKLLKKGECKQAVRNIVTAIAVSGGDRVFVGDVQESVTLFKYIAGSGLGRGMDYNSVNAERLGGRFVCIANDTLCRWIVSLVALDYSTVCGSDKFGNVFVLRIPPELASEAEELMGVVAIEKGGGIGGSSRGMHQLRVEACVHVGGTVVGLSLGRLNGRTTIEMGPQNEDDESQDAIIYATMDGAVGVLIPLAAWNDAEFVRLVEHEMRRRYTTICARDHLAYRSSFYAVKNVVDGDLCEMLGALPHEDIVKCCNVIGQPVSEVLTRIEELRESWL 337
LRVY++D T + F+H+T++ + Y + AFRDM+LVGIG +RLYDLGK++LL+KGE K AVRN ++A+A+SGGDR+FVGDV +SVTLFKY + + R GG FV +A DT+ RWIV+L LDY+TV DKFGN+FVLR+P EL L A G + H+L VEA HVG L G L +TT + E + +A+IY+T+ G +G+L PL +D +F R +E EMR R K+VVDGDLC+ L +C +G+ V ++ ++EEL+ S++
Sbjct: 988 LRVYQVDAATERLTFVHKTVVPEAVYCLTAFRDMLLVGIGATLRLYDLGKQQLLRKGEYKLAVRNKISALAISGGDRIFVGDVSDSVTLFKYEPSEPIAANHTRGAAIGRR-GGHFVPLAADTVPRWIVTLEVLDYNTVSAGDKFGNIFVLRVPTELGILNGGLSITSASPVDRGRAAINIAPHKLVVEASYHVGSMTGSLVRGSLALQTT-----KLEKNAGDEALIYSTLSGTIGILAPLRTQHDIDFARALEREMRTRG------------------KHVVDGDLCQAFTGLSPTGREECATALGRSVEDIDKKLEELQSSYV 1289
BLAST of Ggra6507.t2 vs. uniprot
Match: A0A4P9YTF0 (CPSF_A domain-containing protein n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9YTF0_9FUNG) HSP 1 Score: 192 bits (489), Expect = 1.010e-54 Identity = 112/325 (34.46%), Postives = 176/325 (54.15%), Query Frame = 0
Query: 10 GALRVYRIDKKTRKPVFLHETLIEKPSYAVVAFRDMILVGIGRAIRLYDLGKRKLLKKGECKQAVRNIVTAIAVSGGDRVFVGDVQESVTLFKYIAGSGLGRGMDYNSVNAERLGGRFVCIANDTLCRWIVSLVALDYSTVCGSDKFGNVFVLRIPPELASEAEE-LMGVVAIEKGGGIGGSSRGMHQLRVEACVHVGGTVVGLSLGRLNGRTTIEMGPQNEDDESQDAIIYATMDGAVGVLIPLAAWNDAEFVRLVEHEMRRRYTTICARDHLAYRSSFYAVKNVVDGDLCEMLGALPHEDIVKCCNVIGQPVSEVLTRIEELR 333
G + +Y+ + F+H+T + ++ F + +LVG+G A+R+YD+GKRKLL+K E K R IV+ + G+R+ VGD+QESV Y+ + R + A+DT R+ + +DY TV G DKFGN+FV R+P +++ + E+ G + + G + GSS H+L+ HVG TV + + T+ G +D ++Y T+ GAVG+L+P + +D EF + +E MR +C RDHLAYRSS+ VKNV+DGDLCE ALP + + + SE+ ++E++R
Sbjct: 96 GFIHLYKFSEDGTSLEFVHKTEVNDIPQVMIPFHNRLLVGVGSALRIYDMGKRKLLRKSEAKGFPRAIVSLH--TQGNRIVVGDLQESVHFVTYLP-----------------MENRLIIFADDTTTRYTTATAIIDYDTVVGGDKFGNLFVNRLPSDVSDQVEDDPTGNRLVYERGYLHGSS---HKLKNLTNYHVGDTVTAIE------KATLVAG-------GRDIVLYTTLGGAVGILVPFVSRDDVEFFQTMELHMRNEAPPLCGRDHLAYRSSYIPVKNVIDGDLCEYFNALPLAKKQAIADELDRTPSEITKKLEDIR 385
BLAST of Ggra6507.t2 vs. uniprot
Match: SF3B3 (Probable splicing factor 3B subunit 3 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=SF3B3_DICDI) HSP 1 Score: 198 bits (503), Expect = 4.440e-53 Identity = 119/334 (35.63%), Postives = 180/334 (53.89%), Query Frame = 0
Query: 7 KSHGA--LRVYRIDKKTRKPVFLHETLIEKPSYAVVAFRDMILVGIGRAIRLYDLGKRKLLKKGECKQAVRNIVTAIAVSGGDRVFVGDVQESVTLFKYIAGSGLGRGMDYNSVNAERLGGRFVCIANDTLCRWIVSLVALDYSTVCGSDKFGNVFVLRIPPELASEAEE-LMGVVAIEKGGGIGGSSRGMHQLRVEACVHVGGTVVGLSLGRLNGRTTIEMGPQNEDDESQDAIIYATMDGAVGVLIPLAAWNDAEFVRLVEHEMRRRYTTICARDHLAYRSSFYAVKNVVDGDLCEMLGALPHEDIVKCCNVIGQPVSEVLTRIEELRESWL 337
KSH + L +YR +K L++T +E+P YA+ F+ ++ G+G++IR+YD+GK+KLL+K E K IV ++ GDR+ VGD+QES+ KY +R A+D RW+ S V LDY TV G+DKFGN+FVLR+P ++ E EE G + G + G+ H+L H+ VG ++ LN + + GP+ I+Y T+ GA+G LIP + D +F +E MR +C RDHLAYRS ++ VKN++DGDLCE L ++ + + + SEV+ ++EE+R L
Sbjct: 957 KSHKSAHLNLYRFIDGGKKLELLYKTEVEEPVYAMAQFQGKLVCGVGKSIRIYDMGKKKLLRKCETKNLPNTIVNIHSL--GDRLVVGDIQESIHFIKY-----------------KRSENMLYVFADDLAPRWMTSSVMLDYDTVAGADKFGNIFVLRLPLLISDEVEEDPTGTKLKFESGTLNGAP---HKLD-----HIANFFVGDTVTTLNKTSLVVGGPE--------VILYTTISGAIGALIPFTSREDVDFFSTLEMNMRSDCLPLCGRDHLAYRSYYFPVKNIIDGDLCEQFSTLNYQKQLSISEELSRSPSEVIKKLEEIRSQKL 1255
BLAST of Ggra6507.t2 vs. uniprot
Match: A0A662XU68 (CPSF_A domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XU68_9STRA) HSP 1 Score: 182 bits (463), Expect = 7.450e-52 Identity = 116/324 (35.80%), Postives = 173/324 (53.40%), Query Frame = 0
Query: 10 GALRVYRIDKKTRKPVFLHETLIEKPSYAVVAFRDMILVGIGRAIRLYDLGKRKLLKKGECKQAVRNIVTAIAVSGGDRVFVGDVQESVTLFKYIAGSGLGRGMDYNSVNAERLGGRFVCIANDTLCRWIVSLVALDYSTVCGSDKFGNVFVLRIPPELASEAEELMGVVAIEKGGGIGGSSRGMHQLRVEACVHVGGTVVGLSLGRLNGRTTIEMGPQNEDDESQDAIIYATMDGAVGVLIPLAAWNDAEFVRLVEHEMRRRYTTICARDHLAYRSSFYAVKNVVDGDLCEMLGALPHEDIVKCCNVIGQPVSEVLTRIEELR 333
G LRVYRI + T+ V +H T I+ +A+ F+ +LV +G+A+R+YDLGK+K+L+K E + +V A GDRV+ D+ ES KY ++ + V A+D + R+I S V LDY T+CG DKFGNVFV R+P E++ E + G + G + G+ + Q+ A HVG V ++ R ++ G +AI+YAT+ G +G LIP + D +F +E MR+ +C RDHL+YRS F VKNV DGDLCE +L E + + +EVL ++E++R
Sbjct: 12 GFLRVYRIVEGTQL-VLVHTTEIDDIPHAMCEFQGRLLVSVGKALRIYDLGKKKMLRKCENRNFPSILVELKAA--GDRVYASDMHESFHFVKY-----------------KKEENQLVIFADDCVPRFITSSVLLDYDTLCGGDKFGNVFVSRLPSEVSDEIDNPTGNRILWDSGLLNGAPNKLEQV---AQFHVGDVVTSMA------RASLVPG-------GIEAILYATISGRIGALIPFTSREDVDFYTHLEMYMRQERPPLCGRDHLSYRSYFIPVKNVTDGDLCEQFVSLSPEKQASVAEDLDRTPAEVLKKLEDIR 299
BLAST of Ggra6507.t2 vs. uniprot
Match: F0Z743 (CPSF domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0Z743_DICPU) HSP 1 Score: 193 bits (491), Expect = 1.750e-51 Identity = 111/329 (33.74%), Postives = 179/329 (54.41%), Query Frame = 0
Query: 10 GALRVYRIDKKTRKPVFLHETLIEKPSYAVVAFRDMILVGIGRAIRLYDLGKRKLLKKGECKQAVRNIVTAIAVSGGDRVFVGDVQESVTLFKYIAGSGLGRGMDYNSVNAERLGGRFVCIANDTLCRWIVSLVALDYSTVCGSDKFGNVFVLRIPPELASEAEE-LMGVVAIEKGGGIGGSSRGMHQLRVEACVHVGGTVVGLSLGRLNGRTTIEMGPQNEDDESQDAIIYATMDGAVGVLIPLAAWNDAEFVRLVEHEMRRRYTTICARDHLAYRSSFYAVKNVVDGDLCEMLGALPHEDIVKCCNVIGQPVSEVLTRIEELRESWL 337
++ +Y+ ++ +K +++T E+P YA+ F+ + G+G+ IR+YD+GK+KLL+K E K IV ++ GDR+ VGD+QES+ KY ++L A+D RWI S V LDY TV G+DKFGN+F+LR+P ++ E EE G + G + G+ H+L H+ G ++ LN +T++ +G D ++Y T+ GA+G LIP + D +F +E ++R + +C RDHLAYRS ++ VKN++DGDLCE L + + + + SEVL ++E++R L
Sbjct: 939 ASINLYKFTEEGKKLQLVYKTEAEEPVYAMAPFQGRLCAGVGKNIRIYDMGKKKLLRKCETKNLPNTIVNIHSL--GDRLVVGDIQESIHFIKY-----------------KKLENMLYVFADDLAPRWITSSVMLDYDTVAGADKFGNIFILRLPSNVSDEVEEDPTGSKLKFESGLLNGAP---HKLE-----HIANIFAGDAITTLN-KTSLVVG-------GSDVLLYTTISGAIGALIPFVSREDVDFFSSLELQLRNEHAPLCGRDHLAYRSYYFPVKNIIDGDLCEQFITLDPQKQRQIAEELSRSPSEVLKKLEDIRSQKL 1232
BLAST of Ggra6507.t2 vs. uniprot
Match: A0A662XMA8 (CPSF_A domain-containing protein (Fragment) n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A662XMA8_9STRA) HSP 1 Score: 183 bits (465), Expect = 2.250e-51 Identity = 116/324 (35.80%), Postives = 174/324 (53.70%), Query Frame = 0
Query: 10 GALRVYRIDKKTRKPVFLHETLIEKPSYAVVAFRDMILVGIGRAIRLYDLGKRKLLKKGECKQAVRNIVTAIAVSGGDRVFVGDVQESVTLFKYIAGSGLGRGMDYNSVNAERLGGRFVCIANDTLCRWIVSLVALDYSTVCGSDKFGNVFVLRIPPELASEAEELMGVVAIEKGGGIGGSSRGMHQLRVEACVHVGGTVVGLSLGRLNGRTTIEMGPQNEDDESQDAIIYATMDGAVGVLIPLAAWNDAEFVRLVEHEMRRRYTTICARDHLAYRSSFYAVKNVVDGDLCEMLGALPHEDIVKCCNVIGQPVSEVLTRIEELR 333
G LRVYRI + T+ V +H T I+ +A+ F+ +LV +G+A+R+YDLGK+K+L+K E + +V A GDRV+ D+ ES KY ++ + V A+D + R+I S V LDY T+CG DKFGNVFV R+P E++ E + G + G + G+ + Q+ A HVG V ++ RT++ G +AI+YAT+ G +G LIP + D +F +E MR+ +C RDHL+YRS F VKNV DGDLCE +L + + + +EVL ++E++R
Sbjct: 80 GFLRVYRIVEGTQL-VLVHTTEIDDIPHAMCEFQGRLLVSVGKALRIYDLGKKKMLRKCENRNFPSILVELKAA--GDRVYASDMHESFHFVKY-----------------KKEENQLVIFADDCVPRFITSSVLLDYDTLCGGDKFGNVFVSRLPSEVSDEIDNPTGNRILWDSGLLNGAPNKLEQV---AQFHVGDVVTSMA------RTSLVPG-------GIEAILYATISGRIGALIPFTSREDVDFYTHLEMYMRQERPPLCGRDHLSYRSYFIPVKNVTDGDLCEQFVSLSPDKQASVAEDLDRTPAEVLKKLEDIR 367
BLAST of Ggra6507.t2 vs. uniprot
Match: A0A0L0HCC1 (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HCC1_SPIPD) HSP 1 Score: 192 bits (489), Expect = 3.220e-51 Identity = 118/327 (36.09%), Postives = 174/327 (53.21%), Query Frame = 0
Query: 8 SHGALRVYRIDKKTRKPVFLHETLIEKPSYAVVAFRDMILVGIGRAIRLYDLGKRKLLKKGECKQAVRNIVTAIAVSGGDRVFVGDVQESVTLFKYIAGSGLGRGMDYNSVNAERLGGRFVCIANDTLCRWIVSLVALDYSTVCGSDKFGNVFVLRIPPELASEAEE-LMGVVAIEKGGGIGGSSRGMHQLRVEACVHVGGTVVGLSLGRLNGRTTIEMGPQNEDDESQDAIIYATMDGAVGVLIPLAAWNDAEFVRLVEHEMRRRYTTICARDHLAYRSSFYAVKNVVDGDLCEMLGALPHEDIVKCCNVIGQPVSEVLTRIEELR 333
S G L YR LH+T I+ YA+ AF+ +LVG+G+ +R+YDLGK+KLL+K E KQ NI+T + GDR+ VGDVQESV Y R V A+DT RWI + +DY TV G DKFGN+F+ R+P E + E +E G + + G + G+ H++ A +G + ++ +T I G ++ I+Y T+ G +G LIP + D EF + +E MR ++ +C RDHLAYRS + V+NV+DGDLCE LP+E + + + VSE+ ++E++R
Sbjct: 918 SSGFLHTYRFVDGGNALELLHKTPIDDVPYALCAFQGRLLVGMGKILRIYDLGKKKLLRKCENKQFPNNILTLH--TQGDRIVVGDVQESVHFASY-----------------RHFDNRIVIFADDTTPRWITATTMVDYDTVAGGDKFGNIFIDRLPAETSEEVDEDPTGNKLVYEKGYLQGAP---HKVEHAADFFIGESPTSVT------KTVIVPG-------GREIIVYTTLLGTIGCLIPFQSKEDVEFFQQLEMHMRNKFPPLCGRDHLAYRSYYIPVRNVIDGDLCEQFNLLPNEVKRQIAEDMDRTVSELSKKVEDVR 1209
BLAST of Ggra6507.t2 vs. uniprot
Match: A0A7M7SUD0 (DNA damage-binding protein 1 n=3 Tax=Echinacea TaxID=7674 RepID=A0A7M7SUD0_STRPU) HSP 1 Score: 192 bits (487), Expect = 5.950e-51 Identity = 115/327 (35.17%), Postives = 181/327 (55.35%), Query Frame = 0
Query: 8 SHGALRVYRIDKKTRKPVFLHETLIEKPSYAVVAFRDMILVGIGRAIRLYDLGKRKLLKKGECKQAVRNIVTAIAVSGGDRVFVGDVQESVTLFKYIAGSGLGRGMDYNSVNAERLGGRFVCIANDTLCRWIVSLVALDYSTVCGSDKFGNVFVLRIPPELASEAEE-LMGVVAIEKGGGIGGSSRGMHQLRVEACVHVGGTVVGLSLGRLNGRTTIEMGPQNEDDESQDAIIYATMDGAVGVLIPLAAWNDAEFVRLVEHEMRRRYTTICARDHLAYRSSFYAVKNVVDGDLCEMLGALPHEDIVKCCNVIGQPVSEVLTRIEELR 333
S GA+ Y + ++ +K FLH+TL++ ++ AF+ +L+GIGR +R+YDLGK+KLL+K E K + N +T I +G +RV + DVQES+ KY +R + V A+D+ RWI + LD+ TV +DKFGN+ VLR+P + +E GV A+ G + G+S+ + V + +G TV+ L + T+ G ++++Y T+ GA+GVL+P A D +F + +E MR Y +C RDHL+YRS +Y VKNV+DGDLCE ++ + + SEV ++E++R
Sbjct: 921 SGGAIHTYLLTEEGKKLEFLHKTLVDDVPSSIAAFQGRVLIGIGRLLRIYDLGKKKLLRKCENKH-IPNFITNILTTG-NRVIISDVQESLHFLKY-----------------KRQENQMVIFADDSNPRWITATCLLDHDTVMCADKFGNITVLRLPTSVNDNLDEDPTGVKALWDRGLLNGASQ---KTDVVSSFFIGETVLSLQ------KATLIPG-------GSESVVYTTLSGAIGVLVPFTAHEDHDFFQHLEMHMRSEYAPLCGRDHLSYRSYYYPVKNVIDGDLCEQYNSMELSKQRTVAEELDRNPSEVSKKLEDIR 1212
BLAST of Ggra6507.t2 vs. uniprot
Match: T1DTH9 (Putative damage-specific dna binding complex subunit ddb1 (Fragment) n=3 Tax=Nyssorhynchus TaxID=44543 RepID=T1DTH9_ANOAQ) HSP 1 Score: 188 bits (478), Expect = 6.260e-51 Identity = 116/325 (35.69%), Postives = 172/325 (52.92%), Query Frame = 0
Query: 10 GALRVYRIDKKTRKPVFLHETLIEKPSYAVVAFRDMILVGIGRAIRLYDLGKRKLLKKGECKQAVRNIVTAIAVSGGDRVFVGDVQESVTLFKYIAGSGLGRGMDYNSVNAERLGGRFVCIANDTLCRWIVSLVALDYSTVCGSDKFGNVFVLRIPPELASEAEE-LMGVVAIEKGGGIGGSSRGMHQLRVEACVHVGGTVVGLSLGRLNGRTTIEMGPQNEDDESQDAIIYATMDGAVGVLIPLAAWNDAEFVRLVEHEMRRRYTTICARDHLAYRSSFYAVKNVVDGDLCEMLGALPHEDIVKCCNVIGQPVSEVLTRIEELR 333
G + VYR+D +T + +H T I+ A+ AF+ +L GIG+ +R+YDLGK+KLL+K E K IV + G RV+V DVQESV KY +R + + A+DT RW+ S LDY TV DKFGN+ VLR+P ++ + +E G A+ G + G+S+ + H+G V+ L + T+ G +++IYATM G VG L+P + D +F + +E MR +C RDHL+YRS +Y VKNV+DGDLCE +L + +G+ SEV ++E++R
Sbjct: 358 GFIDVYRVDSQTNELEHVHRTEIDDAPGALCAFQGRLLAGIGKVLRMYDLGKKKLLRKCENKHIPNQIVNIQGM--GQRVYVSDVQESVYCLKY-----------------KRPENQLIIFADDTHPRWVTSATLLDYDTVATGDKFGNIAVLRLPHSVSDDVDEDPTGNKALWDRGLLNGASQKAENI---CTFHLGEIVMSLQ------KATLIPG-------GSESLIYATMSGTVGALVPFTSREDYDFFQHLEMHMRNENPPLCGRDHLSYRSYYYPVKNVMDGDLCEQFTSLDPAKQKSIASDLGRTPSEVAKKLEDIR 647 The following BLAST results are available for this feature:
BLAST of Ggra6507.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra6507.t2 ID=Ggra6507.t2|Name=Ggra6507.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=339bpback to top |