Ggra6504.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6504.t1
Unique NameGgra6504.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length701
Homology
BLAST of Ggra6504.t1 vs. uniprot
Match: A0A2V3J5K0 (5'-3' exoribonuclease 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5K0_9FLOR)

HSP 1 Score: 964 bits (2491), Expect = 0.000e+0
Identity = 475/662 (71.75%), Postives = 544/662 (82.18%), Query Frame = 0
Query:    1 MGILGFQKWFLGTFPEVVRVQQGPKFGEVYDHVAFDINQILHQVLRRATNRQTLAAAIFRELDHILKNCVPRKSIFFAFDGPAPLAKLTTQRXXXXXX--TTEYVSDFIDENGVLRKPKFARPAIDSLEMTPGVETLYFVRDSVEYWAYSRLQNDRKYRNVEIRISGADVPGEGELKLVDYCRTGKFPPTDSVVVVGGDADIVLQGLTTIPIQNFFVYLRNFAGTRGKRQSYVISVWELARTFERIFPHESSSVRLDFVLLAILNGNDYIPKVRGISLARTWRRYVSLKLVAKGGDPPPFQGHSLVDAEKRTLNWPMFYALMGNNIGVPVSSIAEAEQEKQMGVTMSPTSRKQKSKQGYMSLSDSEMDERIVYTGNEDGVPMDCLDESSNSDGTESASDGXXXXXXXXXXXFAEEVDEEEY--------FDEEQEHIQTLIALSGDSGKFYDTRRWVRALLWNLQMYIDGNCGDYNFQYGKPYGPPIEEILKFIRNHDGDPFLIQAPISRSRPLLPHEAAMAVLPKMAKHLLPVPLQRMYDNPTVLKKIFTGKDEVNVASMITEISRIPKSDFSAEELPRTVFGSPILLRIPRPDDQVQHMNPRVRKPGQRFEDVRNRPVIFRAPFTVTTFPPCYDWPKGSIPNMLELSYKTVRGSKLKAKK 652
            MGI+GFQKW LG FP++VRVQQG +FGE YDHVAFDINQILHQ +R+ATNRQTLAAAIFRELD ILKNC+PRKS+FFAFDGPAPLAKL TQR         +EYVSD+IDENGV RK K  +PAID LEMTPGVETLYFVRDSVEYWAYSRLQNDRKYRNVEIRISGADVPGEGELKL+D+CRT + P TDSVVVVGGDADIVLQGL T+P++NFFVYLRNFAG+RG+RQSYVISVWEL R FER+FP+ESSSVRLDFVLLAILNGNDYIPKVRGISL+RTW RY++LKL + GG P PF+G SLVDAEKRTLNWPMFYALM + +GVPVSSIAEAEQEK+      P  RK++ K+GY+S SDSE+ ERIVYTGNEDGVPMDCLD+ S     ES S+                 D  EY        FDEEQEHIQTL+ LSG+S KFYDT RWVRALLWN+QMY+DG CGDY+F+YGKPYGPPI EIL +IRNHDGDPFL QAP+S  RPLLPH+AAMAVLPK AKHLLP PLQR+YD+P  ++KIF  KD+V+V S+I E  RIPKS+FS+EEL RT  G+PILLR  RP DQ+ + NP VR+PGQ+FE++ +RPVI+RAPF VT+ PPCY WP+G++ N+LEL YKTV G  L+ KK
Sbjct:    1 MGIIGFQKWLLGNFPDIVRVQQGARFGEYYDHVAFDINQILHQAVRKATNRQTLAAAIFRELDQILKNCIPRKSVFFAFDGPAPLAKLATQRRRRRQRRGASEYVSDYIDENGVSRKAKTVQPAIDGLEMTPGVETLYFVRDSVEYWAYSRLQNDRKYRNVEIRISGADVPGEGELKLIDFCRTAQIPSTDSVVVVGGDADIVLQGLATVPVRNFFVYLRNFAGSRGRRQSYVISVWELTRIFERLFPNESSSVRLDFVLLAILNGNDYIPKVRGISLSRTWHRYLNLKLDSSGGRPGPFRGRSLVDAEKRTLNWPMFYALM-DRVGVPVSSIAEAEQEKESTPAGVPPRRKRRGKEGYVSYSDSEVGERIVYTGNEDGVPMDCLDDDSVPTRDESFSENGVSETDSYE-------DSSEYNXXXXXXXFDEEQEHIQTLVTLSGNSSKFYDTNRWVRALLWNIQMYVDGYCGDYSFRYGKPYGPPITEILNYIRNHDGDPFLHQAPVSNWRPLLPHQAAMAVLPKQAKHLLPKPLQRIYDDPVAVRKIFGSKDDVDVPSLIAETDRIPKSEFSSEELLRTFHGTPILLRHQRPQDQLPYSNPWVRRPGQKFEEIASRPVIYRAPFAVTSAPPCYKWPRGTVANLLELPYKTVGGFHLRPKK 654          
BLAST of Ggra6504.t1 vs. uniprot
Match: A0A7S1TFG2 (Hypothetical protein n=4 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TFG2_9RHOD)

HSP 1 Score: 337 bits (865), Expect = 8.570e-103
Identity = 231/662 (34.89%), Postives = 342/662 (51.66%), Query Frame = 0
Query:    9 WFLGTFPEVVRVQQGPKFGEVYDHVAFDINQILHQVLRRATNRQTLAAAIFRELDHILKNCVPRKSIFFAFDGPAPLAKLTTQRXXXXXXTTEYVSDFIDENGVLRKPKFARPAIDSLEMTPGVETLYFVRDSVEYWAYSRLQNDRKYRNVEIRISGADVPGEGELKLVDYCRTG----------KFPPTDSVVVVGGDADIVLQGLTTIPIQNFFVYLRNFAGTRGKRQSYVISVWELARTFERIFPHESSSVRLDFVLLAILNGNDYIPKVRGISLARTWRRYVSLKLVAKGGDPPPFQGHSLVDAEKRTLNWPMFYALMGNNIGVPVSS-IAEAEQEKQMGVTMSPTSRKQKSKQGYMSLSDSEMDERIVYTGNEDGVPMDCLDESSNSDGTESASDGXXXXXXXXXXXFAEEVDEEEYFDEEQEHIQTLIALSGDS-GKFYDTRRWVRALLWNLQMYIDGNCGDYNFQYGKPYGPPIEEILKFIRNHDG----------------------DP-FLIQAPISRSRPLLPHEAAMAVLPKMAKHLLPVPLQRMYDNPTVLKKIFTGKDEV---NVASMITEISRIPKSDFSAEELPRTVFGSPILLR-IPRPDDQVQHMNPRVRKPGQRFEDVRNRPVIFRAPFTVTTFPPCYDWPKGS 631
            W+   F  VVR+  G       DHV FD+NQ++H  LR++ N + L   +FR +D  LK C+P++S++FAFDGP P+AKL TQR                     ++   A   ID   +TPG E +Y ++D+++Y+A SRL+ D KY  V++RISG DVPGEGE+K+ D+  +               T+SV+V+GGDADIVLQGL T   ++ FVY ++      + +  VIS+  L +  E  FP ES  VRLDF++L ++NGNDY+PKVRG+     W  Y+++K   KG +   FQG  L+D+ +RT NWP   AL+     V +   +  AE+  Q+       SR  + +         + +E I+YTG+   +       ++  D  +   D   XXXXXX      E D E  +DE           +G+S  + +D   ++R +LWN+QMY+DG C DY + Y + Y P    I+ +++ HDG                      DP F IQ P+S  +PL PH+AA+A+LP  A HLLP P+Q +  + T L +    +D +    ++ ++  +  IP+S ++  EL RT FG+  L+R   RP    Q   P    P  RF  +R    + R   T TT PPC  W   S
Sbjct:    8 WYSVDF--VVRIGYG-----FLDHVCFDLNQVIHMALRKSPNEEKLVIRLFRNIDAALKQCIPKRSVYFAFDGPGPMAKLLTQRVRRSNPANS------------QRKVLANRHIDPNAITPGTELMYMLQDALDYFACSRLEGDMKYDKVDMRISGPDVPGEGEVKIFDWLNSFVARREAGTQVSSIVTESVIVIGGDADIVLQGLATTSFRDLFVYAQS-----RRDEGTVISISLLVKALEDNFPGESDRVRLDFIVLCLMNGNDYLPKVRGVGFDSLWNGYIAIK---KGREQ--FQGQYLLDSTRRTFNWPFLVALLETIRSVVIEPHVLLAEKSLQV----EEPSRMNEEEHDV----PPDPNEIILYTGD---MTASASTSAAIPDVDDDEEDHADXXXXXXSVGDDGEYDYESAYDETN---------TGESPNRLFDIELFLRGILWNVQMYVDGFCPDYTYVYPELYAPSPTAIMNWVKAHDGTVQTNSIDTTPHFSARLDDILGDPLFSIQGPLSTVQPLEPHKAAIAMLPSSASHLLPGPIQELGASCTALDR--ARRDSMYLRELSKVLDAVDSIPRSLYTRAELRRTRFGNVHLIRKTSRPRAASQLPPP----PVARFRSLRVPSHLNRMLVTTTTAPPCLRWTSAS 614          
BLAST of Ggra6504.t1 vs. uniprot
Match: M1US37 (XRN_N domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1US37_CYAM1)

HSP 1 Score: 334 bits (857), Expect = 3.220e-101
Identity = 233/679 (34.32%), Postives = 339/679 (49.93%), Query Frame = 0
Query:    1 MGILGFQKWFLGTFPEVVRVQQGPKFGEVYDHVAFDINQILHQVLRRATNRQTLAAAIFRELDHILKNCVPRKSIFFAFDGPAPLAKLTTQRXXXXXXTTEYVSDFIDENGVLRKPKFARPAIDSLEMTPGVETLYFVRDSVEYWAYSRLQNDRK-YRNVEIRISGADVPGEGELKLVDYCRTGKFPPTDSVVVVGGDADIVLQGLTTIPIQNFFVYL----RNFA-----GTRGKRQSY---VISVWELARTFERIFPHESSSVRLDFVLLAILNGNDYIPKVRGISLARTWRRYVSLKLVAKGGDPPPFQGHSLVDAEKRTLNWPMFYALMGNNIGVPVSSIAEAEQEKQMGVTMSPTSRKQKSKQGYMSLSDSEMDERIVYTGNEDGVPMDCLDESSNSDGTE-SASDGXXXXXXXXXXXFAEEVDEEEYFDEEQEHIQTLIALSGDSGKFYDTRRWVRALLWNLQMYIDGNCGDYNFQYGKPYGPPIEEILKFIRNHDGDPFL-IQAPISRSRPLLPHEAAMAVLPKMAKHLLPVPL--------QRMYDNPTVLKKIFTGKDEV---------------NVASMITEISRIPKSDFSAEELPRTVFGSPILLRIPRPD--------DQVQHMNPRVRKPG-QRFEDVRNRPVIFRAPFTV-----TTFPPCYDW 627
            MGI GFQ+W+L  FP  V    G    E +DHV FD+NQ++H   R A NR      +FR LD+IL+ CVP+KS+F AFDGPAPLAKL TQ+      + +            RK K  R  +D L ++PG E +     +VE++  SRLQ+ R  Y+NV   +SG  VPGEGE+K++DY       P  SVVV+G DAD+V+ GL T  ++NFFV++     N       GT  KRQ+    VISVW+  R  +R FP E+ S+RLD V++ ++ GNDY+PK+RG S    W  Y +LKL     D  P +G  LV  E+R+ +W   YALM   I   V ++ +   E     ++      + ++ G  S+  S   E    + ++D V  + +  S   DGTE  A+ G             E+VD           I   I++  D  K YDT  W+R LLW L MYIDG C D+   Y + YGP   +I+++++ +DGDP L +Q P+S + PL PH A +A++P  A  LLP P+        Q+  +N     ++ T  DE                N + ++  +  I   ++   E  RT   S +   + + D           Q   P++ +P  QRF  +     +  A F++     T+ PPC  W
Sbjct:    1 MGIAGFQRWYLENFPSTVVTVTGESAPEHFDHVLFDLNQLIHLAARVARNRDQFFIRLFRWLDNILRLCVPKKSVFIAFDGPAPLAKLVTQKRRRVLESRKLHRT--------RKRK-RRCGVDVLSLSPGTELMQLTLQAVEFYVCSRLQSKRHLYQNVRFVVSGPTVPGEGEIKIIDYIHR-YVDPQHSVVVIGSDADLVVLGLATQKVRNFFVFVITPRANMQDAPEHGTAQKRQAISAIVISVWQWIRVLDRFFPGETPSLRLDLVVMLMMQGNDYLPKLRGTSFNSIWEAYKALKL-----DKGPMRGKYLVCREQRSFDWEFLYALMKRLINPLVPNLTKELIEMYREASIRGQEALRLAQAGNASVEASSSCE----SESKDSVERN-VHPSDLEDGTEPDAAHGEISADVTDPEDILEKVD-----------IPEGISVDDDE-KLYDTEEWLRTLLWALAMYIDGFCPDFYHTYSRAYGPSASDIVRWLKENDGDPLLQLQPPLSVAPPLPPHAALLALVPASAARLLPQPIFKRVLLRSQQQAENSESAAEMGTNADETAKLITFILQDDGRRTNRSLLLRVVEGIRDDEYEEIEKHRTRLSSSVAFALRQGDMSGNGRTCASSQERAPKLPEPPVQRFAKLS----LSGAEFSIEGVQLTSTPPCRSW 643          
BLAST of Ggra6504.t1 vs. uniprot
Match: A0A7J7IHE6 (XRN_N domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IHE6_9RHOD)

HSP 1 Score: 334 bits (856), Expect = 4.630e-101
Identity = 229/688 (33.28%), Postives = 345/688 (50.15%), Query Frame = 0
Query:    1 MGILGFQKWFLGTFPEVVRVQQGPKFGEVYDHVAFDINQILHQVLRRATNRQTLAAAIFRELDHILKNCVPRKSIFFAFDGPAPLAKLTTQRXXXXXXTTEYVSDFIDENGVLRK--PKFARPAIDSLEMTPGVETLYFVRDSVEYWAYSRLQNDRK-YRNVEIRISGADVPGEGELKLVDYCRTGKFPPTDSVVVVGGDADIVLQGLTTIPIQNFFVYL---RNFA--GTRGKRQSY-------VISVWELARTFERIFPHESSSVRLDFVLLAILNGNDYIPKVRGISLARTWRRYVSLKLVAKGGDPPPFQGHSLVDAEKRTLNWPMFYALMGN--NIGVP--VSSIAEAEQEKQM-GVTMSPTSRKQKSKQGYMSLSDSEMD---ERIVYTGNEDGVPMDCLDESSNS--DGTESASDGXXXXXXXXXXXFAEEVDEEEYFDEEQEHIQTLIALSGDSGK-FYDTRRWVRALLWNLQMYIDGNCGDYNFQYGKPYGPPIEEILKFIRNHDGDPF-LIQAPISRSRPLLPHEAAMAVLPKMAKHLLPVPLQR--------------------MYDNPTVLKKIFTGKDE---VNVASMITEISRIPKSDFSAEELPRTVFGSPILLRIPRPDDQVQHMNPRVR----------KPGQRFEDVRNRPV-IFRAPFTVTTFPPCYDW 627
            MGI GFQ+WFL TFP            E +DHV FD+NQ++H   R A NR      ++R LD +L+ CVP++S+F AFDGPAPLAKL TQ+              ++   + RK  PK  R  +D L ++PG E +     ++E++  SRLQ+ R  YRN+   +SG  VPGEGE+K++DY       P  SV+V+G DAD+VL GL T  I++FFV++   R  A   +RG  +++        ISVW+  R  +R+FP E++ VRLD  LL ++ GNDY+PK+RG S    W  Y +LK+  + G   P  G  L+  E+RT+N    YALM +  N  VP     + E  +E  + G  M+  +  + ++ G     D++     E+I+Y G+ +  P  C + +     D T+                           D+  E ++T   +S D+ +  +DT  W+R LLW L MY+DG C D+ F Y KPYGP   +I+++++  DGDP   +Q P+S + PL PH A +A++P  A  LLP PL +                    M  + T     F  +D+    N   ++  I +IP++++   E+PRT FGS +   +       +  +P  +           P QRF  +    +  F      T+ PPCY W
Sbjct:    1 MGIAGFQRWFLETFPSTATTITDETLPESFDHVLFDLNQLIHLAARVAKNRDQFFIRLYRWLDKVLRLCVPKESVFIAFDGPAPLAKLVTQKRRRV----------LEARKLTRKLEPK-KRCGVDVLSLSPGTELMQMTLQAIEFYVCSRLQSKRNLYRNLRFVVSGPTVPGEGEIKIIDYIHRC-VEPHHSVIVIGSDADLVLLGLATQKIRDFFVFVITPRQSAQVASRGPAETHRNSVNATTISVWQWIRVLDRLFPGETAPVRLDLALLLMMQGNDYVPKLRGSSFKSIWAAYKALKM--RQG---PMSGRYLLCGEQRTINLEFLYALMSSLENPLVPQLTKQLVEMYREASIRGQEMARLAELESTRTGATETPDNDSISDVEQILYNGDLE-KPSPCKETTKEPVIDMTDP--------------------------DDMLEMVETPEGVSYDNDETMFDTENWLRMLLWALAMYVDGFCPDFYFTYPKPYGPSATDIVRWLQEIDGDPIPTLQPPMSVAPPLPPHAALLALIPSTAAKLLPRPLYKRVLLRARGSDENPENAGLSGMMSDETAKLITFILRDDGRRTNRTILLRVIEKIPENEYEDLEIPRTRFGSSVAFELTCRGANSRKSDPSTKYTASYETLPKPPVQRFAKLSPSWIDFFIQTVQFTSAPPCYSW 644          
BLAST of Ggra6504.t1 vs. uniprot
Match: R7Q4K1 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4K1_CHOCR)

HSP 1 Score: 325 bits (833), Expect = 1.070e-100
Identity = 180/406 (44.33%), Postives = 242/406 (59.61%), Query Frame = 0
Query:  266 DYIPKVRGISLARTWRRYVSLKLVAKGGDPPPFQGHSLVDAEKRTLNWPMFYALMGNNIGVPVSSIAEAEQEKQMGVTMSP-------TSRKQKSKQGYMSLSDSE--MDERIVYTGNEDGVPM--------------DCLDESSNSDGTESASDGXXXXXXXXXXXFAEEVDEEEYFDEEQEHIQTLIALSGDSGKFYDTRRWVRALLWNLQMYIDGNCGDYNFQYGKPYGPPIEEILKFIRNHDGDPFLIQAPISRSRPLLPHEAAMAVLPKMAKHLLPVPLQRMYDNPTVLKKIFTGKDEVNVASMITEISRIPKSDFSAEELPRTVFGSPILLRIPRPDDQVQHMNPRVRKPGQRFEDVRNRPVIFRAPFTVTTFPPCYDWPKGSIPNMLELSYKTVRGSKL 648
            DYIPK+RG+SL RTWRRY+SLKL   G    PF+G  +VDAEKRT NW   +AL+ + +GVPV  + +  + +Q  + ++        +S      Q  ++L +S    D+RIVYTGNEDGVPM              D LD   + D TES   G             +E+DE    D EQ HI+ L+A++G+S KFYDT R+ RALLW L MYIDG C DY FQY KPYGP  + + K+I++H+GDPF+IQAP++ + PL P++AA A+LP+ A HLLP P+Q++  NP + K++F  KDEVN+ +++  I  IP S +S  E  R   G P LLR P   D     N  V +PG +FE +R +PVI+      T  PPC+ WP GS P ML L Y  V G +L
Sbjct:    6 DYIPKIRGVSLGRTWRRYLSLKLSGDGNKEAPFKGQLIVDAEKRTFNWQFLHALI-DKVGVPVRPVEQELRAQQSALDVAANTLSDVGSSHVASDGQSLIALDNSTEIADDRIVYTGNEDGVPMEDEVEWHGLDDDNEDVLDPLIDCD-TESDESGELTD---------DEIDEA--VDAEQAHIENLVAITGNSTKFYDTERFFRALLWTLHMYIDGFCSDYTFQYAKPYGPSCDVLSKYIKDHNGDPFVIQAPVANTSPLRPYQAAAAMLPRHAVHLLPKPVQQVVQNPALSKRLFLPKDEVNIFALVQAIDEIPLSAYSETERQRLECGLPFLLRRPIRGDFCPRANAPVPRPGPKFEQIRAQPVIYYRNLRATDAPPCHAWPSGSTPGMLNLPYVQVGGLRL 398          
BLAST of Ggra6504.t1 vs. uniprot
Match: A0A7S2ZT58 (Hypothetical protein n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZT58_9RHOD)

HSP 1 Score: 229 bits (583), Expect = 3.630e-63
Identity = 179/584 (30.65%), Postives = 266/584 (45.55%), Query Frame = 0
Query:    1 MGILGFQKWFLGTFPEVVRVQQGPKFGEVYDHVAFDINQILHQVLRRATNRQTLAAAIFRELDHILKNCVPRKSIFFAFDGPAPLAKLTTQRXXXXXXTTEYVSDFIDENGVLRKPKFARPAIDS-LEMTPGVETLYFVRDSVEYWAYSRLQNDRKYRNVEIRISGADVPGEGELKLVDYCRTGKFPPTD--SVVVVGGDADIVLQGLTTIPIQNFFVYLRNFAGTRGKRQSYVISVWELARTFERIFPHESSSVRLDFVLLAILNGNDYIPKVRGISLARTWRRYVSLKLVAKGGDPPPFQGHSLVDAEKRTLNWPMFYALMGNNIGVPVSSIAEAEQEKQMGVTMSPTSRKQKSKQGYMSLSDSEMDERIVYTGNEDGVPMDCLDESSNSDGTESASDGXXXXXXXXXXXFAEEVDEEEYFDEEQEHIQTLIALSGDSGKFYDTRRWVRALLWNLQMYIDGNCGDYNFQYGKPYGPPIEEILKFIRNHDGDPFLIQAPISRSRPLLPHEAAMAV-LPKMAKHLLPVPLQRMYDNPTVLKKIFTGKDEVNVASMITEISRIPKSDFSAEELPRTVFGSPILLR 580
            MGI GFQKW   TFPE V        G+ +D+V  D+N +LH V  R+ + Q L   +F ELD +LK C P K++  A DGPAPLAK+ T R        +YVS         RK        D  LE TPG   ++ + +S+EY+   RL N  K+  ++   SG++V GEGE+K++DY      P  +  SVV++GGD+DI+LQ L T  I NFFVY R+   T        +SV  L    + +      + RLDFVLL +L+GNDY+PK+RG +L++  ++Y  ++   K          S++      +NW  F  ++              ++  +M   M+  SR   S   + S  +            EDG  +D +D+    D                                          L+GD    YD   +++ LLWN+QMYIDG   D  F Y   Y PP++ +L F     G    +  P+S +RP +  + A+ + LP  A  L P  LQ +  +   +       D V V   + EI   P S ++ EE  RT+  + ++ R
Sbjct:    1 MGISGFQKWIRTTFPEAVD-DVPESAGDRFDYVCIDVNHVLHSVANRSPDHQLLPLLLFAELDRLLKACQPLKAVVLAMDGPAPLAKVATARKRRE----QYVS---------RKQYNNASGHDYYLEFTPGTAMMHQLGNSIEYFICQRLLNGSKFGKIDFVFSGSNVHGEGEIKILDYLNLCVAPKNENSSVVIIGGDSDIILQALCTPQIYNFFVYFRSGGPTS------CVSVRLLGSLIDEVL---GDNQRLDFVLLCLLSGNDYLPKLRGYNLSKAMKKYSRIRRRTK---------QSVIGGPPLGINWETFCQVI--------------DKHNRMA-KMAKASRSSSSVNAFPSAQE------------EDGEDLDGVDDDELEDDA---------------------------------------VLTGD----YDVETYIKGLLWNMQMYIDGYPPDQLFYYRFKYAPPVDAVLDFFLEK-GMYTQVDLPVS-NRPAITSQLALTLMLPSAAWSLAPGRLQPLVKSGASIS------DFVEVRKRVQEI---PFSTYTGEE--RTMLRTGVVWR 469          
BLAST of Ggra6504.t1 vs. uniprot
Match: A0A6H5KZW9 (XRN_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZW9_9PHAE)

HSP 1 Score: 229 bits (585), Expect = 2.390e-61
Identity = 190/592 (32.09%), Postives = 280/592 (47.30%), Query Frame = 0
Query:    2 GILGFQKWFLGTFPEVVRVQQGPKFGEVYDHVAFDINQILHQVLRRATNRQTLAAAIFRELDHILKNCVPRKSIFFAFDGPAPLAKLTTQRXXXXXXTTEYVSDFIDENGVLRKPKFARPAIDSLEMTPGVETLYFVRDSVEYWAYSRLQNDRKYRNVEIRISGADVPGEGELKLVDYCRTGKFP-PTDSVVVVGGDADIVLQGLTTIPIQNFFVYLRNFAGTRGKRQSYVISVWELARTFERIFPHESSSVRLDFVLLAILNGNDYIPKVRGISLARTWRRYVSLKLVAKGGDPPPFQGHSLVDAEKRTLNWPMFYALMGNNIGVPVSSIAEAEQEKQMGVTMSPTSRKQKSKQGYMSLSDSEMD------------ERIVYTGN-EDGVPM---DCLDE-SSNSDGTESASDGXXXXXXXXXXXF-------------AEEVDEE---EYFDE--EQEHIQTLIA-------------LSGDSGK--------------FYDTRRWVRALLWNLQMYIDGNCGDYNFQYGKPYGPPIEEILKFIRNHDGDPFL-IQAPISRSRPLLPHEAAMAVLPKM--AKHLLPVPLQ 527
            GI GF KWF+  FP  V         E +DHV  D+NQILH  +R+A +       IFR+++  LK C PRKS+ FAFDG APLAKL  QR                EN   R  K+   A   L ++PG + +  V  ++EY+A+        Y+ V+  ISGA+VPGEGELK +D+ +    P P +S V+VGGDAD++LQGL    ++N F+  +  AG+       + S+WE+ R+ E +FP +S+ VR+D  +L +LNGNDY+PKVRG+S +R ++ Y +LK   +G     F    L+D +K+++ W     L+ + I    S +AEAE                    GY+++S  +MD            +  V  G   DGV +   D  DE S +S GT+                F             AE++ EE   + +DE  EQE  + L               L  DSG                +D   ++  +LWNLQMYIDG   ++ ++Y   Y P   +I+ +++    D    +  P+  + PL    A + +LP     K  LP  LQ
Sbjct:   21 GINGFHKWFVQEFPTAVT---DASRVESFDHVCIDMNQILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRSRR-------------ENSK-RNSKYRMSA---LHLSPGTKFMDDVASAMEYYAFQECTRPC-YQGVKFYISGANVPGEGELKCIDWLK--HMPKPDESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYR-----LSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALK---RGKHRDNF----LIDGDKKSICWEFLQDLLADMIP---SIVAEAE--------------------GYLAVSLEQMDLNNRYPPAGSVFKMAVQQGKLGDGVEIEVHDLSDEVSGSSGGTKKWKSVTWVRGKEYTYHFLHVGKKKTVMHLAAEKLLEELLPDLYDEFLEQEKARILEQAQLDQENEDIDSNLDEDSGAENGRERGSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVKLASEDKLANLAVPVIGAPPLPASIACLCMLPMTDRGKSFLPKRLQ 554          
BLAST of Ggra6504.t1 vs. uniprot
Match: A0A7S2ZT80 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZT80_9RHOD)

HSP 1 Score: 194 bits (493), Expect = 2.460e-50
Identity = 169/587 (28.79%), Postives = 259/587 (44.12%), Query Frame = 0
Query:    1 MGILGFQKWFLGTFPEVVRVQQGPKFGE-VYDHVAFDINQILHQVLRRATNRQTLAAAIFRELDHILKNCVPRKSIFFAFDGPAPLAKLTTQRXXXXXXTTEYVSDFIDENGVLRKPKFARPAIDSLEMTPGVETLYFVRDSVEYWAYSRLQNDRKYRNVEIRISGADVPGEGELKLVDYCRTGKFP--PTDSVVVVGGDADIVLQGLTTIPIQNFFVYLRNFAGTRGKRQSYVISVWELARTFERIFPHESSSVRLDFVLLAILNGNDYIPKVRGISLARTWRRYVSLKLVAKGGDPPPFQGHSLVDAEKRTLNWPMFYALMGNNIGVPVSSIAEAEQEKQMGVTMSPTSRKQKSKQGYMSLSDSE---MDERIVYTGNEDGVPMDCLDESSNSDGTESASDGXXXXXXXXXXXFAEEVDEEEYFDEEQEHIQTLIALSGDSGKFYDTRRWVRALLWNLQMYIDGNCGDYNFQYGKPYGPPIEEILKFIRNHDGDPFLIQAPISRSRPLLPHEAAMAV-LPKMAKHLLPVPLQRMYDNPTVLKKIFTGKDEVNVASMITEISRIPKSDFSAEELPRTVFGSPILLR 580
            MGI GFQKW   TFP+ V  Q  PK  +  +D+V  D+N ++H V R +  R+ L   +  EL+ IL  C PR+++F A DGP PLAK+ T R       ++   D       L            LE TPG   ++ + + +E++   +LQ   K R ++   S ++VPGEGE+K+ D+      P     SVVV+GGD+D +L GL    I N FV+LR+  G  G    + +SV  L    +++        RLDFVLL +L+GNDY+PK+RG + +    +Y  ++   K          S++      +NW  F  ++  +  +               V M+  SR   S + + S S  E    D R+                    DG                                ++ +Q    L+GD    YD   +++ LLWN+QMYIDG   D  F Y   Y PP++ +L F     G    +  P+S +RP +  + A+ + LP  A  L P  LQ +  +   +       D V V   + EI   P S ++ EE  RT+  + ++ R
Sbjct:    1 MGIRGFQKWIRRTFPDAV--QYVPKNSQDFFDYVCIDMNLVIHNVARSSPGRRQLCDLLSDELNRILNVCKPRRAVFLAMDGPPPLAKVATVREWREKYFSKNQYDSASGGDYL------------LEFTPGTALMHELANEIEWFICQKLQKF-KSRKIQFIFSSSNVPGEGEVKIQDFLNQCVAPNRKNPSVVVIGGDSDSILMGLCKPQIYNLFVFLRS--GHAG----HCVSVGLLGSRIDQLLGENQ---RLDFVLLCLLSGNDYLPKLRGYNFSEAIGKYRQIRNRTK---------KSVIGGPPLGINWETFCQIIDKHDFL---------------VRMARASRLSPSVKAHTSWSPHEEHFQDIRVXXXX----XXXXXXXXXXXVDGLH------------------------------EDGVQDDAVLTGD----YDVETYIKGLLWNMQMYIDGYPPDQLFYYRFKYAPPVDAVLDFFLEK-GMYTQVDLPVS-NRPAITSQLALTLMLPSAAWSLAPGRLQPLVKSGASIS------DFVEVRKRVQEI---PFSTYTGEE--RTMLRTGVVWR 488          
BLAST of Ggra6504.t1 vs. uniprot
Match: L1JQ07 (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JQ07_GUITC)

HSP 1 Score: 180 bits (456), Expect = 2.490e-48
Identity = 97/260 (37.31%), Postives = 148/260 (56.92%), Query Frame = 0
Query:   37 INQILHQVLRRATNRQTLAAAIFRELDHILKNCVPRKSIFFAFDGPAPLAKLTTQRXXXXXXTTEYVSDFIDENGVLRKPKFARPAIDSLEMTPGVETLYFVRDSVEYWAYSRLQNDRKYRNVEIRISGADVPGEGELKLVDYCRTGKFPPTDS-VVVVGGDADIVLQGLTTIPIQNFFVYLRNFAG-------TRGKRQ-SYVISVWELARTFERIFPHESSSVRLDFVLLAILNGNDYIPKVRGISLARTWRRYVSLK 287
            +N +LH   R+A + +     +++ELD  L+  +P KS+  AFDGP PLAKL TQR                     +  K ++  +  L +TPG + +  +R++ EY+A  RL    K++NV   ISGADV GEGE+K++++         D  +++VGGDAD+VLQGL  + +++ FVY              +GK   S V+S+WE+ R+ ER+FP +S +VR D ++L I+NGNDY+PKVRG S    +R Y  +K
Sbjct:    1 MNGLLHTACRKAKDFEHAILRVYKELDATLRTLIPTKSVVLAFDGPGPLAKLLTQRKRRN-----------------KSSKASKYKLSGLHITPGTKFMQTMREACEYYAALRLVASAKFKNVAFYISGADVAGEGEIKIIEWIHNLLQNQNDEKIIIVGGDADLVLQGLAVLRVKDLFVYAGKDMSQHPSSRKAKGKSSPSIVLSMWEVVRSLERLFPGQSQAVRADLIVLMIMNGNDYLPKVRGGSFESFFRAYKKVK 243          
BLAST of Ggra6504.t1 vs. uniprot
Match: L8GYH6 (5'3' exoribonuclease, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GYH6_ACACA)

HSP 1 Score: 194 bits (492), Expect = 3.770e-48
Identity = 133/384 (34.64%), Postives = 186/384 (48.44%), Query Frame = 0
Query:    1 MGILGFQKWFLGTFPE----VVRVQQGPKFGE--------VYDHVAFDINQILHQVLRRATNRQTLAAAIFRELDHILKNCVPRKSIFFAFDGPAPLAKLTTQRXXXXXXTTEYV---------------------SDFIDENGVLRKPKFARPAIDSLEMTPGVETLYFVRDSVEYWAYSRLQNDRKYRNVEIRISGADVPGEGELKLVDY----CRTGKFPPT-------------------------DSVVVVGGDADIVLQGLTTIPIQNFFVYLRNFAGTRGKRQSYVISVWELARTFERIFPHES--SSVRLDFVLLAILNGNDYIPKVRGISLARTWRRYVSLKLVAKGGDPPPFQGHSLVDAEKRTLNWPMFYALM 320
            MGI GFQKW    +P     V    + P  GE         +DH+  D+N  +H V RRA N + L   +FRELD + K CV R+SIF A DGPA  AKL TQR       ++                       +  + +  V +K +F     + L++T G   +Y +++++ +WA SRLQ+D KY    I ISG DVPGEGELK++++          PP                          DS ++VG DAD++L GL+++ +QN F+        RG+    + S+WE  R+ E  FP     +  RLDFVL+++L GNDY+PK+RG SL R W RY  LK        P F    LV+    TLN P F  L+
Sbjct:    1 MGIAGFQKWLEKHYPHCFIPVPDAPRRPAPGERAPPAVKDYFDHIYVDLNGYIHTVGRRAANEEQLFTLLFRELDGLFKVCVARQSIFLAIDGPASAAKLITQRKRRLGAASKQDRQAKXXXXXXXXXXXXXAQTGAPAVSKKRVKKKGEF-----NLLQVTAGTPFMYRLKNALCFWACSRLQSDPKYHFTRIYISGPDVPGEGELKIMEFIVSHANADSSPPPNPQERVFAYQTGFADQERNAEKFRRDSHLIVGTDADLILLGLSSM-LQNVFILNTQ----RGQSSKLLFSIWEFCRSLEHSFPFRGHCNMTRLDFVLISLLQGNDYLPKLRGASLDRLWARYKKLK------QQPQFHQQFLVNPG-YTLNVPFFLNLV 367          
The following BLAST results are available for this feature:
BLAST of Ggra6504.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5K00.000e+071.755'-3' exoribonuclease 1 n=1 Tax=Gracilariopsis cho... [more]
A0A7S1TFG28.570e-10334.89Hypothetical protein n=4 Tax=Compsopogon caeruleus... [more]
M1US373.220e-10134.32XRN_N domain-containing protein n=1 Tax=Cyanidiosc... [more]
A0A7J7IHE64.630e-10133.28XRN_N domain-containing protein n=1 Tax=Cyanidioco... [more]
R7Q4K11.070e-10044.33Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S2ZT583.630e-6330.65Hypothetical protein n=4 Tax=Rhodosorus marinus Ta... [more]
A0A6H5KZW92.390e-6132.09XRN_N domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A7S2ZT802.460e-5028.79Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
L1JQ072.490e-4837.31Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
L8GYH63.770e-4834.645'3' exoribonuclease, putative n=1 Tax=Acanthamoeb... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004859Putative 5-3 exonucleasePFAMPF03159XRN_Ncoord: 1..208
e-value: 1.3E-37
score: 129.6
NoneNo IPR availableGENE3D3.40.50.12390coord: 124..268
e-value: 1.1E-15
score: 59.8
coord: 1..105
e-value: 4.0E-18
score: 67.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 337..359
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 373..422
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 340..359
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 400..422
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 651..700
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 385..399
NoneNo IPR availableCDDcd09897H3TH_FEN1-XPG-likecoord: 256..295
e-value: 0.00873688
score: 33.3398
IPR0164945'-3' exoribonuclease 1PANTHERPTHR12341:SF75'-3' EXORIBONUCLEASE 1coord: 1..603
IPR0270735'-3' exoribonucleasePANTHERPTHR123415'->3' EXORIBONUCLEASEcoord: 1..603
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 1..230

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000074_piloncontigtig00000074_pilon:561666..563956 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6504.t1Ggra6504.t1Gracilaria gracilis GNS1m malemRNAtig00000074_pilon 561666..563956 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6504.t1 ID=Ggra6504.t1|Name=Ggra6504.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=701bp
MGILGFQKWFLGTFPEVVRVQQGPKFGEVYDHVAFDINQILHQVLRRATN
RQTLAAAIFRELDHILKNCVPRKSIFFAFDGPAPLAKLTTQRRRRRKKTT
EYVSDFIDENGVLRKPKFARPAIDSLEMTPGVETLYFVRDSVEYWAYSRL
QNDRKYRNVEIRISGADVPGEGELKLVDYCRTGKFPPTDSVVVVGGDADI
VLQGLTTIPIQNFFVYLRNFAGTRGKRQSYVISVWELARTFERIFPHESS
SVRLDFVLLAILNGNDYIPKVRGISLARTWRRYVSLKLVAKGGDPPPFQG
HSLVDAEKRTLNWPMFYALMGNNIGVPVSSIAEAEQEKQMGVTMSPTSRK
QKSKQGYMSLSDSEMDERIVYTGNEDGVPMDCLDESSNSDGTESASDGSV
SDSEDSESDFAEEVDEEEYFDEEQEHIQTLIALSGDSGKFYDTRRWVRAL
LWNLQMYIDGNCGDYNFQYGKPYGPPIEEILKFIRNHDGDPFLIQAPISR
SRPLLPHEAAMAVLPKMAKHLLPVPLQRMYDNPTVLKKIFTGKDEVNVAS
MITEISRIPKSDFSAEELPRTVFGSPILLRIPRPDDQVQHMNPRVRKPGQ
RFEDVRNRPVIFRAPFTVTTFPPCYDWPKGSIPNMLELSYKTVRGSKLKA
KKKKAGVEDNANQGKVGNKRRRRTQRGPRHMRTRISSSDRVHEYSRNPQS
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004859Put_53exo
IPR0164945_3_exoribonuclease_1
IPR0270735_3_exoribonuclease
IPR029060PIN-like_dom_sf