Ggra6489.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6489.t1
Unique NameGgra6489.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length339
Homology
BLAST of Ggra6489.t1 vs. uniprot
Match: A0A2V3J5B4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5B4_9FLOR)

HSP 1 Score: 134 bits (336), Expect = 1.640e-32
Identity = 105/329 (31.91%), Postives = 166/329 (50.46%), Query Frame = 0
Query:    3 TIALRPSLFSLLVTLVSVLTELALLSALLRFNTLLQCRRLSRGATLSIARHRRCTTQLALLTMLLFVLIELLASANTITVFSVQTIRQPCTQ---------FSPLFPQRSGASGAEVALYSCLRVNGLQFSVFAGNHSSVTDAVRCAQSFAFRYQNLQRVSQPLADDGVM-RCTPSAF-----CAIARARGRT-LFTSEAFELPSD-DVDQSQLLRFLPTQLSFAPAP-HLPMFAMRTAQAFEQGITDELDLRRRVIMGWSSGSCLFTSDGEEQTQIPAPMLGATIAVWVLSVLLFILSLSLRAKVHFDMNNQMHWANR-VRRQVDDET 312
            TI LRPS+ SL++T+ S++ ELA LSAL  FN + +CR L  G  +S+ARHR     L +L  L FV +E++ SAN+ T    ++   PC +          +  F  ++  +G +    SC+ V G +  V  GN+S  T  V+C     F Y + ++   P A  GV+  C    F     CA    + +T L  SE F   S+ ++D      F PTQL        L   A +    +  G++DE ++RRR++       C F ++  E T+I       T+ +W + +  F++ L +R  V +DM+N +HWA + V RQ++D+T
Sbjct:    4 TIPLRPSVTSLVITITSLVVELACLSALFIFNAVCECRSLRNGNRVSVARHRLRIKILTILATLTFVGLEVITSANSHTKPVTESTLSPCIRSVTKQNFDNINSSFDDQTVTNGRDNIGISCVNVGGGEVFVKNGNYSLDTLDVQCGAKPIFSYVSAEKEFLPPASPGVITHCEQDEFLNMGTCASVSLQNKTRLLISERFSEESNFEIDAE----FRPTQLFMTIGEDQLESIAKQLLTLYTIGVSDEAEVRRRILTDGIRSQCSFDAETHEFTEIKLWAFILTVIIWAMCITFFLVMLFVRRGVFYDMSNALHWAEKTVYRQLEDDT 328          
BLAST of Ggra6489.t1 vs. uniprot
Match: A0A2V3J5A0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5A0_9FLOR)

HSP 1 Score: 129 bits (325), Expect = 6.080e-31
Identity = 102/338 (30.18%), Postives = 165/338 (48.82%), Query Frame = 0
Query:    1 MATIALRPSLFSLLVTLVSVLTELALLSALLRFNTLLQCRRLSRGATLSIARHRRCTTQLALLTMLLFVLIELLASANTITVFSVQTIRQPCTQFSPLFPQRSGASGAEVA----LYSCLRVNGLQFSVFAGNHSSVTDAVRCAQSFAFRYQNLQRVSQPLAD-----------DGVMRCTPSAFCAIARARG-------RTLFTSEAFELPSDDVDQSQL----LRFLPTQLSFAP--APHLPMFAMRTAQAFEQGITDELDLRRRVIMGWSSGSCLFTSDGEEQTQIPAPMLGATIAVWVLSVLLFILSLSLRAKVHFDMNNQMHWANRVRRQVDD 310
            M  I L+    SL+ T++S+LTEL+LL ALLR N   +C  L +G  +S+ RH+   T L L+T   F  IELL S  +     +    QPC     L  +RSG  G  +     + SC++ N     +  GN+S  T  V CA+S    +     VS P+             D +++C    FC + +           T++ S+ F   +D+V   Q+    ++FL T +  A      LP FA R  QA+++ + D  +LRR + +G    +C F    E  T++P  ++ +   VWV+S+  + ++L L  +V +D++N +HWA R  R+ D+
Sbjct:    1 MVLIPLKSQYVSLINTIISLLTELSLLKALLRVNNYCECHALQKGHHVSVTRHQNRATCLVLVTTAAFFAIELLLSFYSDPAVKLTFQSQPCVAVETL-TRRSGDPGTSLEEIGIVLSCVKTNESNIFLRVGNYSMETRKVECAESATLMFTLEPHVSLPIGTAAAVSSENPFPDPLLKCA-DGFCVVIQTASYQSSSSDTTVWFSDVFF--ADEVSMLQIDNSPIKFLNTTIFSAQNNTELLPKFAERLLQAYDENLNDPFELRRLMFLGSERDTCQFQRTSEA-TEVPPFIIVSVSTVWVISLAAYAMTLLLSRRVFYDISNPVHWAKRTYRRTDE 333          
BLAST of Ggra6489.t1 vs. uniprot
Match: A0A2V3J6F3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6F3_9FLOR)

HSP 1 Score: 115 bits (288), Expect = 6.910e-26
Identity = 94/317 (29.65%), Postives = 142/317 (44.79%), Query Frame = 0
Query:    1 MATIALRPSLFSLLVTLVSVLTELALLSALLRFNTLLQCRRLSRGATLSIARHRRCTTQLALLTMLLFVLIELLASANTITVFSVQTIRQPCTQFSPLFPQRSGASG---AEVALYSCLRVNGLQFSVFAGNHSSVTDAVRCAQSFAFRYQNLQRVSQPLADDGVMRCTPS----AFCAIARARGRTLFTSEAFELPSDDVDQSQLLRFLPTQLSFAPAPHLPMFAMRTAQAFEQGITDELDLRRRVIMGWSSGSCLFTSDGEEQTQIPAPMLGATIAVWVLSVLLFILSLSLRAKVHFDMNNQMHWANRVRRQVDD 310
            M  I L+    S++VT++S L ELALLS L   N L +C++L RG ++ + +H R T  L+++ +  F  +E++ S     V +VQ     C   S        ++    A   L  C R++    + F GN SS T  V C+    + +      S+ +  D    C       A C   + RG     S  F L    +    L   + T+L F P  ++ +FA R   AF Q I     LRR +  G S   C F       T +P  M+ A  AVW +++ +F    +LR  V F +++ MHWA R  R  DD
Sbjct:    1 MVLIRLKAPFVSVIVTVLSTLAELALLSFLFVLNNLHECKQLQRGRSVQVRQHLRRTRLLSVVCLGAFFALEVVFSFYNDPVNNVQIEIHECITASNSVKDSGDSTQFLRASDILVECRRLDNGTITQFGGNFSSRTQQVECSTEAMYTHPLGDETSEEIVADVPFGCVSGGEEGAACVFVQQRGNLSLISAPFFLDELSILPDTLPHII-TELHFTPPSNVSLFATRATNAFLQNIQGPSALRRIIYSGASEDQCAFPVVRGSATTVPLAMIVALAAVWAVALAMFASVFALRRGVFFKLDDPMHWATRSVRAADD 316          
BLAST of Ggra6489.t1 vs. uniprot
Match: A0A2V3IUG0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUG0_9FLOR)

HSP 1 Score: 111 bits (277), Expect = 4.170e-24
Identity = 90/305 (29.51%), Postives = 151/305 (49.51%), Query Frame = 0
Query:    8 PSLFS-LLVTLVSVLTELALLSALLRFNTLLQCRRLSRGATLSIARHRRCTTQLALLTMLLFVLIELLASANTITVFSVQTIRQPCTQ------FSPLFPQRSGASGAEVALYSCLRVNGLQF-SVFAGNHSSVTDAVRCAQSFAFRYQNLQRVSQPLAD-DGVMRCTPSAFCAIARA--RGRTLFTSEAFELPSDDVDQSQLLRFLPTQLSFAPAPHLPMFAMRTAQAFEQGITDELDLRRRVIMGWSSGSCLFTSDGEEQTQIPAPMLGATIAVWVLSVLLFILSLSLRAKVHFDMNNQMHWA 301
            P+L++ L+ T ++ +TE+  +SA      L +C  L+    + +A HRR    + ++ M+ F+ +E+L S  T         +Q CTQ      F  L          E+ LYSCLR N     ++  G  S  T AV+C Q + F+Y+N +   +  ++ D V +     FC +      G  +F S+     S D D +++     T L+F     + + A +    +EQG+ DELD+RRR+++      C F+SD +E + +P  +LG  I++W     LFIL+  L+  V +D++N  HWA
Sbjct:   21 PTLYTQLMFTAINAITEIGCVSATFVLIGLAECYALTTHRRVRLASHRRYHRVVQVVAMITFIALEVLISTFTKPHTHHIESKQNCTQVNRTENFLALNDSDERRMSEEMVLYSCLRTNSSNIINISTGVKSEDTGAVQCNQEWIFQYENDRTDHEQFSERDEVGKQCNEQFCTLVSLDRSGTRMFLSKPVPRASFDSDNNKIDGKW-TNLNFNVQIDVKIMATKVLGLYEQGVFDELDVRRRLLVQSKKQECQFSSDRKEHSVLPFWLLGLIISMWGTCAFLFILTRVLKRGVFYDIDNPSHWA 324          
BLAST of Ggra6489.t1 vs. uniprot
Match: A0A2V3J5C2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5C2_9FLOR)

HSP 1 Score: 108 bits (269), Expect = 5.490e-23
Identity = 91/328 (27.74%), Postives = 151/328 (46.04%), Query Frame = 0
Query:    1 MATIALRPSLFSLLVTLVSVLTELALLSALLRFNTLLQCRRLSRGATLSIARHRRCTTQLALLTMLLFVLIELLASANTITVFSVQTIRQPCTQFSPLFPQR---SGASGAEVALYSCLRVNGLQFSVFAGNHSSVT-----------DAVRCAQSFAFRYQNLQRV-SQPLADDGVMRCTPSAFCAIARARGRTLFTSEAFELPSDDV----DQSQLLRFLPTQLSFAPAPHLPMFAMRTAQAFEQGITDELDLRRRVIMGWSSGSCLFTSDGEEQTQIPAPMLGATIAVWVLSVLLFILSLSLRAKVHFDMNNQMHWANRVRRQVD 309
            M  I L+    SL+VT++S + ELALLSA+L FN  L+CR L  G  +++  HR  T  L +   L FV +E+ +S  +      + +R+ CT    L  Q+   + ++   V    C+ +N   F   AGN S              +   C +       N++R   +P+ D+ V+ C  ++   + R+     FT       S+DV    ++S  L    T +S+        FA R      QG+TD   LRR V  G +   C F +  +  T++    + A +  W LS+  F+ S ++R ++ +DM++ +HWA +  R  D
Sbjct:    1 MVLIPLKSQYTSLIVTVISGIAELALLSAVLVFNKYLECRALQNGGKVNVRHHRFRTKALTVAATLAFVFLEVFSSFYSDPDDKTELVRKNCTSLDALTVQQGLLNISTQTTVVGVKCIGINSTLFWQHAGNISDGRNIGNGGNIGDDEVFECEKKEVLYTANVERAPDEPVPDEYVVGCVGTSCVFVYRSGNEVTFTDFVH---SEDVSRVLNESITLPVWKTTISYNVTGLESAFATRAVDLLSQGVTDGFTLRRGVFAGSAITQCNFKTFSDA-TRVRKGFIYAIVIAWALSISAFVGSFAIRRRIFYDMSDPLHWAQKTIRDND 324          
BLAST of Ggra6489.t1 vs. uniprot
Match: A0A2V3IN83 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN83_9FLOR)

HSP 1 Score: 87.0 bits (214), Expect = 1.570e-15
Identity = 78/312 (25.00%), Postives = 138/312 (44.23%), Query Frame = 0
Query:    4 IALRPSLFSLLVTLVSVLTELALLSALLRFNTLLQCRRLSRGATLSIARHRRCTTQLALLTMLLFVLIELLASANTITVFSVQTIRQPCTQFS-----PLFPQRSGASGAEVALYSCLRVN-----GLQFSVFAGNHSSVTDA--VRCAQSFAFRYQNLQRVSQPLADDGVMRCTPSAFCAIARARGRTLFTSEAFELPSDDVDQSQLLRFLPTQLSFAPAPHLPMFAMRTAQAFEQGITDELDLRRRVIMGWSSGSCLFTSDGEEQTQIPAPMLGATIAVWVLSVLLFILSLSLRAKVHFDMNNQMHWANR 303
            I LRP    LL T+VS L+E+ L+SA+L   T  +C  LS    +SI  H      + ++ ML+F+ +E L S +T T          C Q        L  + S     E  + +C+++           V+ GN+S   +   V C+  +  +Y+   +    L  +    C  + FC    ++   +F S    LPS   + +       T+      P L   A      +++GI +E+ +RR++ M    G C  T+  +E T +P  ++  T   W  S +LF L+  L++ + +++++ +HW  R
Sbjct:   17 IPLRPLTTQLLFTIVSALSEIGLISAVLVILTKKECHTLSTERPVSIKSHSLRWRLIPVVAMLMFIALETLVSVHTKTHIHHVKNSHKCVQVDLRTSEALEVESSLNKEEEAVMLNCVKMTPAEDANFNIEVYPGNYSRSGEKIFVDCSADWLMKYKLDTKGKGILEPNAEQHCR-NGFCVFLYSQESKVFFSPP--LPSARFNHTNEYTGYWTEFIPGAVPSLNSTATYLLLLYQKGILEEIQIRRKLFMSAERGQCEMTNGSKEHTLVPYWLISITALSWFCSAILFALTRVLKSGIFYNISDPLHWTRR 325          
The following BLAST results are available for this feature:
BLAST of Ggra6489.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3J5B41.640e-3231.91Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5A06.080e-3130.18Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J6F36.910e-2629.65Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IUG04.170e-2429.51Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5C25.490e-2327.74Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IN831.570e-1525.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 287..338
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..85
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 86..264
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..59
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 265..286
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availableTMHMMTMhelixcoord: 60..82
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 264..286

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000074_piloncontigtig00000074_pilon:384966..385982 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6489.t1Ggra6489.t1Gracilaria gracilis GNS1m malemRNAtig00000074_pilon 384966..385982 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6489.t1 ID=Ggra6489.t1|Name=Ggra6489.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=339bp
MATIALRPSLFSLLVTLVSVLTELALLSALLRFNTLLQCRRLSRGATLSI
ARHRRCTTQLALLTMLLFVLIELLASANTITVFSVQTIRQPCTQFSPLFP
QRSGASGAEVALYSCLRVNGLQFSVFAGNHSSVTDAVRCAQSFAFRYQNL
QRVSQPLADDGVMRCTPSAFCAIARARGRTLFTSEAFELPSDDVDQSQLL
RFLPTQLSFAPAPHLPMFAMRTAQAFEQGITDELDLRRRVIMGWSSGSCL
FTSDGEEQTQIPAPMLGATIAVWVLSVLLFILSLSLRAKVHFDMNNQMHW
ANRVRRQVDDETEATLLKLAAASDGSAATVYLINKHAA*
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