Ggra6485.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra6485.t1
Unique Name	Ggra6485.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	442

Homology

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BLAST of Ggra6485.t1 vs. uniprot
Match: A0A2V3IE74 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE74_9FLOR)

HSP 1 Score: 249 bits (635), Expect = 5.140e-75
Identity = 173/399 (43.36%), Postives = 222/399 (55.64%), Query Frame = 0

Query:    1 MNNLDLLFQASLLVESEKLHEVDKFFVVSKDLKSCMGMRMSGWTILRDLLCSAEGTIQCARERVHGKDDDSQLKRYVGDYSNLISIIVQLYSQEAELLHAVKRQIVDVFAAKNEMIQRYGHSSWAEKNVEEVVADNSKPPVTTTTACGDKQRQADAPQECGRTERAACEGRTHGCSEV--NKGDXXXXXXXXXXKETTGSAKAFTGENGRLKIRIPVNRQD----TKVNVDVQKGGEAESKEELEEEVCMDDDDVGEQKKSKQVEGATSVSEEEKMEACXXXXXXXXXXXXKPNQRIGAQSAECTKQVKKEVCGATTRSLRRNRKRRSVETEQDGVGGTKRRRINWTAQENKLFIELVDKFQAMGEAEMRRRVARHFSPRRTHEQCANHLRILRAKGVI 393
            MNNLDLL +AS++VESEKLH +DKF  V ++LKS +G R++GW IL++LL S E TI   +ER  G +D  QLKRY+ DY +LI+ ++Q+Y+QEAELLHAVKR+I+DVF AKNE ++  G+S+  E  +E    +N   P     A G++Q        CG  ER  CE  T G ++   N              E    ++    +   LKIRIPV RQD      V  +V   G A     L E     D        SK   G   +   EK                   ++   QS E             +R  RR+RKRRS E+E D V  +KRRRINWT  EN++FI LV +FQ +GE EMRRR+ARHFSPRRTHEQCANHLRILRAKGV+
Sbjct:    1 MNNLDLLLEASIIVESEKLHVMDKFSAVGRELKSSIGGRVTGWKILQELLRSGESTILSRKERKLGPNDP-QLKRYLEDYDSLIASVIQIYTQEAELLHAVKREIIDVFVAKNEFMRSGGNSAEDETKLEGTGLNNQPAP-----AAGERQEST-----CGSDER--CEPNTSGGADYDDNPTKCRTTPESEEMAEPKAKSQVSVDKGHALKIRIPVVRQDGPERRAVEKEVPVKGTAIRTRNLTEPCSKGD--------SKDASGDVGLLLVEKYRLSGGSGADGSQSEVGAAEKATVQSEETV----------ASRVPRRHRKRRSFESEGDAVP-SKRRRINWTQDENRVFIGLVRQFQPLGETEMRRRLARHFSPRRTHEQCANHLRILRAKGVL 367

The following BLAST results are available for this feature:

BLAST of Ggra6485.t1 vs. uniprot

BLAST of Ggra6485.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IE74	5.140e-75	43.36	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.10.60		coord: 332..392 e-value: 6.8E-7 score: 31.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 397..441
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 424..441
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 247..265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..201
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..195
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 332..388 score: 6.051468
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 333..387

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000074_pilon	contig	tig00000074_pilon:303473..304798 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra6485.t1	Ggra6485.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000074_pilon 303473..304798 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra6485.t1 ID=Ggra6485.t1|Name=Ggra6485.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=442bp
MNNLDLLFQASLLVESEKLHEVDKFFVVSKDLKSCMGMRMSGWTILRDLL
CSAEGTIQCARERVHGKDDDSQLKRYVGDYSNLISIIVQLYSQEAELLHA
VKRQIVDVFAAKNEMIQRYGHSSWAEKNVEEVVADNSKPPVTTTTACGDK
QRQADAPQECGRTERAACEGRTHGCSEVNKGDNKGDNKGDNKKETTGSAK
AFTGENGRLKIRIPVNRQDTKVNVDVQKGGEAESKEELEEEVCMDDDDVG
EQKKSKQVEGATSVSEEEKMEACSAVLKEKEAEACKPNQRIGAQSAECTK
QVKKEVCGATTRSLRRNRKRRSVETEQDGVGGTKRRRINWTAQENKLFIE
LVDKFQAMGEAEMRRRVARHFSPRRTHEQCANHLRILRAKGVIASVEEQP
AASGGGGGGGGGGGGGGGGGNRCGHTSRDSSVTMSRDSEWC*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR009057	Homeobox-like_sf