Ggra6448.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6448.t1
Unique NameGgra6448.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length205
Homology
BLAST of Ggra6448.t1 vs. uniprot
Match: R7Q8R8 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8R8_CHOCR)

HSP 1 Score: 166 bits (420), Expect = 7.070e-44
Identity = 82/135 (60.74%), Postives = 97/135 (71.85%), Query Frame = 0
Query:   70 GTEAPAKKTPDPNVNAKPFAIESQATPYNRLPNELLRGNLRDYHRRGLDWLQILWRRDLNRILAVEMGLGKNIQTIALLAWLEVEKRMWDPHLIVVPTSVMVNWEVQFKKWLPGFKVLIYFGSVKEGKEKRRGWT 204
            G +      P PN    P  + +      + P ELLRG LRDY R G++WL  L+++ LN ILA EMGLGK IQTI+LLAWL VEK +W PHLIVVPTSVMVNWEV+FKKWLPGFK+L YFGS+KE K KR+GWT
Sbjct:  626 GNDGINSSAPSPNTVHTP--VSNHGVSEIKEPTELLRGRLRDYQRTGMNWLISLYKQKLNGILADEMGLGKTIQTISLLAWLAVEKGVWGPHLIVVPTSVMVNWEVEFKKWLPGFKILTYFGSMKERKLKRQGWT 758          
BLAST of Ggra6448.t1 vs. uniprot
Match: helicase swr1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D88FE (helicase swr1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D88FE)

HSP 1 Score: 158 bits (400), Expect = 1.710e-43
Identity = 79/139 (56.83%), Postives = 99/139 (71.22%), Query Frame = 0
Query:   74 PAKKTPDPNVNAKP-------FAIESQATPYN-RLPNELLRGNLRDYHRRGLDWLQILWRRDLNRILAVEMGLGKNIQTIALLAWLEVEKRMWDPHLIVVPTSVMVNWEVQFKKWLPGFKVLIYFGSVKEGKEKRRGWT 204
            PA K     VNAKP         +++Q  P   R P  LLRG LRDY + G++WL  ++ + LN ILA EMGLGK IQTIALLAWL  E+ +W PHL+VVPTSV++NWEV+FKKWLPGFK+L Y+GS+KE + KRRGW+
Sbjct:   77 PAVKKCREQVNAKPEESQEGASEVDAQIPPSKMRAPFRLLRGTLRDYQQVGMEWLVTMYNQKLNGILADEMGLGKTIQTIALLAWLAQERGIWGPHLVVVPTSVLINWEVEFKKWLPGFKILPYYGSLKERRSKRRGWS 215          
BLAST of Ggra6448.t1 vs. uniprot
Match: A0A3M7PBS4 (Helicase domino isoform X1 (Fragment) n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7PBS4_BRAPC)

HSP 1 Score: 144 bits (364), Expect = 6.100e-39
Identity = 69/106 (65.09%), Postives = 83/106 (78.30%), Query Frame = 0
Query:   99 RLPNELLRGNLRDYHRRGLDWLQILWRRDLNRILAVEMGLGKNIQTIALLAWLEVEKRMWDPHLIVVPTSVMVNWEVQFKKWLPGFKVLIYFGSVKEGKEKRRGWT 204
            R+P+ELL+ +LR+Y   GLDWL  ++   LN ILA EMGLGK IQTIALLA L V+K +W PHLIVVPTSVM+NWE++FKKW PG K+L Y+GS KE K KR GWT
Sbjct:   71 RIPSELLKHSLREYQHVGLDWLVTMYDNKLNGILADEMGLGKTIQTIALLAHLAVDKAIWGPHLIVVPTSVMLNWELEFKKWSPGLKILTYYGSQKERKLKRVGWT 176          
BLAST of Ggra6448.t1 vs. uniprot
Match: A0A1X0RNT4 (Uncharacterized protein n=4 Tax=Rhizopus TaxID=4842 RepID=A0A1X0RNT4_RHIZD)

HSP 1 Score: 152 bits (383), Expect = 6.270e-39
Identity = 94/209 (44.98%), Postives = 120/209 (57.42%), Query Frame = 0
Query:    5 EAEEEKDQNDILALQTQADLPLKDLLRCQGIDPENYLSPMKPSRP-PESNDSDFDINTNGTAEELAGTEAPAKKTPDP--NVNAKPFAIESQATPYNRLPNE-------LLRGNLRDYHRRGLDWLQILWRRDLNRILAVEMGLGKNIQTIALLAWLEVEKRMWDPHLIVVPTSVMVNWEVQFKKWLPGFKVLIYFGSVKEGKEKRRGW 203
            + E E D+ +I AL   ADLP+  LL+      ++ +  +   +  P S   D +       E    T +PA  +     +   +    + Q T    L  +       LLRG LR+Y   GLDWL  L+   LN ILA EMGLGK IQTIALLA+L  EKR+W PHLIVVPTSV++NWE++FKKWLPGFKVL Y+GS KE KEKR GW
Sbjct:  458 DGESEDDEAEINALNEDADLPIDQLLQKYNYSAQDNVIQLNGEKEIPLSALMDTEFAGEQPRETKDTTLSPASPSSSDISSTRTRRSLRKIQPTGNTLLTTKVRTKIPFLLRGTLREYQHVGLDWLASLYNNGLNGILADEMGLGKTIQTIALLAYLACEKRVWGPHLIVVPTSVILNWEMEFKKWLPGFKVLTYYGSPKERKEKRSGW 666          
BLAST of Ggra6448.t1 vs. uniprot
Match: A0A367K7D0 (Swr1 complex component (Fragment) n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367K7D0_RHIST)

HSP 1 Score: 151 bits (382), Expect = 8.440e-39
Identity = 83/152 (54.61%), Postives = 102/152 (67.11%), Query Frame = 0
Query:   63 GTAEELAGTEAPAKKTPDPN---VNAKPFAIESQATP--------YNRLPNELLRGNLRDYHRRGLDWLQILWRRDLNRILAVEMGLGKNIQTIALLAWLEVEKRMWDPHLIVVPTSVMVNWEVQFKKWLPGFKVLIYFGSVKEGKEKRRGW 203
            GT  E+ G+    + +P P+   V  +  A + Q T         Y ++P  LLRG LR+Y   GLDWL  L+   LN ILA EMGLGK IQTIALLA+L  EK++W PHLIVVPTSV++NWE++FKKWLPGFKVL Y+GS KE KEKR GW
Sbjct:  396 GTEFEVQGSMESIQPSPSPSESSVRTRRSARKIQPTGNTLSTTKVYTKIPF-LLRGELREYQHVGLDWLASLYNNGLNGILADEMGLGKTIQTIALLAYLACEKKVWGPHLIVVPTSVILNWEMEFKKWLPGFKVLTYYGSPKERKEKRSGW 546          
BLAST of Ggra6448.t1 vs. uniprot
Match: A0A813MY07 (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A813MY07_9BILA)

HSP 1 Score: 151 bits (382), Expect = 8.700e-39
Identity = 71/106 (66.98%), Postives = 85/106 (80.19%), Query Frame = 0
Query:   99 RLPNELLRGNLRDYHRRGLDWLQILWRRDLNRILAVEMGLGKNIQTIALLAWLEVEKRMWDPHLIVVPTSVMVNWEVQFKKWLPGFKVLIYFGSVKEGKEKRRGWT 204
            R+P+ELL+ NLR+Y   GLDWL  ++   LN ILA EMGLGK IQTIALLA L V+K +W PHLIVVPTSVM+NWE++FKKW PGFK+L Y+GS KE K+KR GWT
Sbjct:  518 RIPSELLKHNLREYQHVGLDWLVTMYENKLNGILADEMGLGKTIQTIALLAHLAVDKGIWGPHLIVVPTSVMLNWELEFKKWCPGFKILTYYGSQKERKQKRIGWT 623          
BLAST of Ggra6448.t1 vs. uniprot
Match: A0A1Y2G361 (SNF2 family N-terminal domain-domain-containing protein n=1 Tax=Leucosporidium creatinivorum TaxID=106004 RepID=A0A1Y2G361_9BASI)

HSP 1 Score: 151 bits (382), Expect = 8.730e-39
Identity = 94/214 (43.93%), Postives = 126/214 (58.88%), Query Frame = 0
Query:    1 MAMAEAEEEKDQNDILALQTQADLPLKDLLRCQGIDP-ENYLSPMKPSRPPESNDSDFDINTNGTAEELAGTEAPAKKTP--------DPNVNAKPFAIESQATPY-NRLPNELLRGNLRDYHRRGLDWLQILWRRDLNRILAVEMGLGKNIQTIALLAWLEVEKRMWDPHLIVVPTSVMVNWEVQFKKWLPGFKVLIYFGSVKEGKEKRRGWT 204
            M   EA    D +++  L  +ADLP+++L+R  G  P ++  S +  S  P ++DS     TNG   E  G E  A+           +     +P   E+      N  P  LLRG+LR Y + GL+WL  L+   +N ILA EMGLGK IQTI+LLA L  +K  W PHL+VVPTSVM+NWE++FKK+LPGFK+L Y+G+ KE KEKRRGW 
Sbjct:  805 MEAEEAGAASDDSEMDGLAEEADLPIEELMRKYGYGPADDTASGVDES--PAADDSKEAPLTNGNHIEEIGEEEDAQSATAESXXXXXEQEAEEEPEEDEAPVEKVANIRPPFLLRGSLRPYQQAGLEWLASLYTSGVNGILADEMGLGKTIQTISLLAHLACDKGQWGPHLVVVPTSVMLNWEMEFKKFLPGFKILTYYGTQKERKEKRRGWN 1016          
BLAST of Ggra6448.t1 vs. uniprot
Match: A0A167PVT9 (Helicase ATP-binding domain-containing protein (Fragment) n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167PVT9_PHYB8)

HSP 1 Score: 144 bits (364), Expect = 1.430e-38
Identity = 68/101 (67.33%), Postives = 81/101 (80.20%), Query Frame = 0
Query:  104 LLRGNLRDYHRRGLDWLQILWRRDLNRILAVEMGLGKNIQTIALLAWLEVEKRMWDPHLIVVPTSVMVNWEVQFKKWLPGFKVLIYFGSVKEGKEKRRGWT 204
            LLRG LR+Y   GLDWL  L+   LN ILA EMGLGK IQTIALLA+L  EK +W PHLIVVPTSV++NWE++FK+WLPGFK+L Y+G+ KE KEKR GW+
Sbjct:    3 LLRGTLREYQHVGLDWLASLYSNGLNGILADEMGLGKTIQTIALLAYLACEKGIWGPHLIVVPTSVILNWEMEFKRWLPGFKILTYYGNPKERKEKRFGWS 103          
BLAST of Ggra6448.t1 vs. uniprot
Match: SWR1 (Helicase swr1 n=6 Tax=Neosartorya fumigata TaxID=746128 RepID=SWR1_ASPFU)

HSP 1 Score: 150 bits (380), Expect = 1.610e-38
Identity = 75/139 (53.96%), Postives = 99/139 (71.22%), Query Frame = 0
Query:   66 EELAGTEAPAKKTPDPNVNAKPFAIESQATPYNRLPNELLRGNLRDYHRRGLDWLQILWRRDLNRILAVEMGLGKNIQTIALLAWLEVEKRMWDPHLIVVPTSVMVNWEVQFKKWLPGFKVLIYFGSVKEGKEKRRGWT 204
            E ++  EAP +K P P+ +  P       TP   +P+ LLRG LR+Y   GLDWL  L+   +N ILA EMGLGK IQTIALLA L VE  +W PHL+VVPTSV++NWE++FKKW PGFK++ Y+GS++E ++KR+GWT
Sbjct:  795 ESISSFEAPGEKPPQPSESPAP----GLKTP---IPH-LLRGTLREYQHYGLDWLAGLYNNHINGILADEMGLGKTIQTIALLAHLAVEHEVWGPHLVVVPTSVILNWEMEFKKWCPGFKIMTYYGSIEERRQKRKGWT 925          
BLAST of Ggra6448.t1 vs. uniprot
Match: A0A316VN25 (Uncharacterized protein n=1 Tax=Ceraceosorus guamensis TaxID=1522189 RepID=A0A316VN25_9BASI)

HSP 1 Score: 150 bits (379), Expect = 2.150e-38
Identity = 88/220 (40.00%), Postives = 120/220 (54.55%), Query Frame = 0
Query:    6 AEEEKDQNDILALQTQADLPLKDLLR---CQGIDPENYLSPM-----------------KPSRPPESNDSDFDINTNGTAEELAGTEAPAKKTPDPNVNAKPFAIES-QATPYNRLPNELLRGNLRDYHRRGLDWLQILWRRDLNRILAVEMGLGKNIQTIALLAWLEVEKRMWDPHLIVVPTSVMVNWEVQFKKWLPGFKVLIYFGSVKEGKEKRRGWT 204
            A++E D  +   L   AD+PL++LL+     G+       P+                 + S PP  +DS               + AP  ++P    +A P  +     + Y   P  LLRGNLR Y + G +WL  L+  + N ILA EMGLGK IQTI+LLA L  +K +W PHL+V PTSVM+NWEV+FKK+LPGFK+L Y+G+ KE KEKR+GW 
Sbjct:  415 AQDESDSEEDDGLAADADMPLEELLKRYKSDGVGTMQEAPPLIEEIGFANDDSDTGSVGRSSSPPGESDSKSPAEAGSETNGSVISPAPRSRSPTGASSAAPSTLSGPNPSAYRIKPPFLLRGNLRPYQQIGFEWLASLYANNANGILADEMGLGKTIQTISLLAHLACDKGVWGPHLVVAPTSVMLNWEVEFKKFLPGFKILSYYGNQKERKEKRKGWN 634          
The following BLAST results are available for this feature:
BLAST of Ggra6448.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7Q8R87.070e-4460.74Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
helicase swr1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D88FE1.710e-4356.83helicase swr1-like n=1 Tax=Mercenaria mercenaria T... [more]
A0A3M7PBS46.100e-3965.09Helicase domino isoform X1 (Fragment) n=1 Tax=Brac... [more]
A0A1X0RNT46.270e-3944.98Uncharacterized protein n=4 Tax=Rhizopus TaxID=484... [more]
A0A367K7D08.440e-3954.61Swr1 complex component (Fragment) n=1 Tax=Rhizopus... [more]
A0A813MY078.700e-3966.98Hypothetical protein n=1 Tax=Brachionus calyciflor... [more]
A0A1Y2G3618.730e-3943.93SNF2 family N-terminal domain-domain-containing pr... [more]
A0A167PVT91.430e-3867.33Helicase ATP-binding domain-containing protein (Fr... [more]
SWR11.610e-3853.96Helicase swr1 n=6 Tax=Neosartorya fumigata TaxID=7... [more]
A0A316VN252.150e-3840.00Uncharacterized protein n=1 Tax=Ceraceosorus guame... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000330SNF2, N-terminalPFAMPF00176SNF2-rel_domcoord: 129..198
e-value: 8.5E-15
score: 54.4
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 80..204
e-value: 2.9E-33
score: 116.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..78
NoneNo IPR availablePANTHERPTHR45685:SF1HELICASE SRCAPcoord: 5..204
NoneNo IPR availablePANTHERPTHR45685HELICASE SRCAP-RELATEDcoord: 5..204
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 93..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000074_piloncontigtig00000074_pilon:85182..86306 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6448.t1Ggra6448.t1Gracilaria gracilis GNS1m malemRNAtig00000074_pilon 85182..86306 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6448.t1 ID=Ggra6448.t1|Name=Ggra6448.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=205bp
MAMAEAEEEKDQNDILALQTQADLPLKDLLRCQGIDPENYLSPMKPSRPP
ESNDSDFDINTNGTAEELAGTEAPAKKTPDPNVNAKPFAIESQATPYNRL
PNELLRGNLRDYHRRGLDWLQILWRRDLNRILAVEMGLGKNIQTIALLAW
LEVEKRMWDPHLIVVPTSVMVNWEVQFKKWLPGFKVLIYFGSVKEGKEKR
RGWT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000330SNF2_N
IPR038718SNF2-like_sf
IPR027417P-loop_NTPase