Ggra6438.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6438.t1
Unique NameGgra6438.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length118
Homology
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BLAST of Ggra6438.t1 vs. uniprot
Match: A0A2V3IYN9 (Kinesin-like protein KIN-14R n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYN9_9FLOR)

HSP 1 Score: 137 bits (345), Expect = 3.150e-35
Identity = 65/100 (65.00%), Postives = 79/100 (79.00%), Query Frame = 0 
Query:   17 DESGTRRVCFQLDKFTQTFSHVYVLGDAHALGEWDPNRALSMNMQTAANSICRGEWRLDLPIDDDDNPIRYTYMIISSSESHEQRQVVAPDRVRTLDFTS 116
            +E+GTRRVCFQL KFTQTFSHVY+LG   ALGEWDPNRAL M+M  AA+   RGEWRL+L +DDD   + YTYMI++++ S +QR+V  PD  RTLDFTS
Sbjct:  205 NEAGTRRVCFQLLKFTQTFSHVYLLGSTPALGEWDPNRALRMSMHAAADGTWRGEWRLELHMDDDYQQLEYTYMIVTANHSLDQRRVFLPDHRRTLDFTS 304
The following BLAST results are available for this feature:
BLAST of Ggra6438.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IYN93.150e-3565.00Kinesin-like protein KIN-14R n=1 Tax=Gracilariopsi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002044Carbohydrate binding module family 20SMARTSM01065CBM_20_2coord: 21..115
e-value: 0.0027
score: 25.4
IPR002044Carbohydrate binding module family 20PFAMPF00686CBM_20coord: 23..103
e-value: 2.0E-10
score: 40.4
IPR002044Carbohydrate binding module family 20PROSITEPS51166CBM20coord: 16..117
score: 10.67816
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 14..113
e-value: 4.6E-13
score: 51.0
IPR013784Carbohydrate-binding-like foldSUPERFAMILY49452Starch-binding domain-likecoord: 19..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000074_piloncontigtig00000074_pilon:9094..9447 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6438.t1Ggra6438.t1Gracilaria gracilis GNS1m malemRNAtig00000074_pilon 9094..9447 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6438.t1 ID=Ggra6438.t1|Name=Ggra6438.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=118bp
MHPSLLSRQPDADCNADESGTRRVCFQLDKFTQTFSHVYVLGDAHALGEW
DPNRALSMNMQTAANSICRGEWRLDLPIDDDDNPIRYTYMIISSSESHEQ
RQVVAPDRVRTLDFTST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002044CBM_fam20
IPR013783Ig-like_fold
IPR013784Carb-bd-like_fold