Ggra6432.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6432.t1
Unique NameGgra6432.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length355
Homology
BLAST of Ggra6432.t1 vs. uniprot
Match: A0A2V3J604 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J604_9FLOR)

HSP 1 Score: 231 bits (588), Expect = 6.780e-70
Identity = 139/261 (53.26%), Postives = 159/261 (60.92%), Query Frame = 0
Query:   94 LSSGTGFSLRELHTQRFSQLSSRRDALSRRGAYAIRAHDGDVVYMGYSKNVAAKLLFHHTRVPQHCVSFQVYAPPLPPHLLTPDVLEGVLEYWVRETGGVPVGNAVDRALWEPAVEPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTFSDAFRATAAPGVDWSASEHDYVHVHVDPFDAFSASGKRAAGSRSSSAWQHDEHDEGGGANARADWVPILALMGVAGLIWLIGVLGNALPAATPSMGM 354
            +SS  GFSLR++ +  F +LS+  ++L+  G YAIR  D  ++YMGYSKNVAAKL FH T  PQ+CVSF VY PPLPP L++PD+LE VLEYWVRETG VP GN VDRALWE     P                              XXXXXX        TFSDAFR TA   VDW+AS+ DYV V VDPFD FSAS KRAA     + W  D+     G     DW+PILAL      IWLIGVLGNALPAATPSMGM
Sbjct:   88 ISSPAGFSLRDVPSFNFQELSTNSESLAITGVYAIRGPDRSIMYMGYSKNVAAKLQFHQTLQPQNCVSFHVYVPPLPPELISPDLLESVLEYWVRETGTVPRGNTVDRALWEN----PNPIPRKPAQNQPSEPPSDIPVRERTTPPRAXXXXXXRNSTSSSDTFSDAFRTTAEREVDWNASDDDYVQVDVDPFDPFSASKKRAAPR---TPWGDDDDXXXXGE----DWLPILALAXXXXXIWLIGVLGNALPAATPSMGM 337          
BLAST of Ggra6432.t1 vs. uniprot
Match: S0F2T4 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F2T4_CHOCR)

HSP 1 Score: 207 bits (527), Expect = 1.440e-60
Identity = 121/276 (43.84%), Postives = 147/276 (53.26%), Query Frame = 0
Query:   92 AALSSGTGFSLRELHTQRFSQLSSRRDALSRRGAYAIRAHDGDVVYMGYSKNVAAKLLFHHTRVPQHCVSFQVYAPPLPPHLLTPDVLEGVLEYWVRETGGVPVGNAVDRALWEPAVEPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTFSDAFRATAAPGV---------DWSASEHDYVHVHVDPFDAFSASGKRAAGSRSSSAW----QHDEHDEGGGANARADWVPILALMGVAGLIWLIGVLGNALPAATPSMGM 354
            A L+S TGF+L +     F+ LS   D  +R GAYAIR   G + YMGYSKN+AAKL FH   VP+ C +FQVY PP+P  L++PD+LE VLEYWVRE GGVP GN VDRALWE                                                   F D FR+++              W   + DYV V VDP D FSAS KR +   + SAW    + DE+DE        DW+PI+ALMG AGLIWL+ +LGNALPAATPS+GM
Sbjct:   90 AGLASPTGFALGDNPINAFATLSDSADEYARGGAYAIRNPAGQLCYMGYSKNIAAKLAFHERLVPEQCATFQVYVPPVPEELISPDMLESVLEYWVRENGGVPTGNTVDRALWEQETPVDRKEPTANRTGDAMEGEREEDIPVRERTTPRRTSVRDRPADSYDDNFVDNFRSSSGSAPRRRRKDGRRGWDDPDDDYVEVDVDPLDPFSASNKRQS---TRSAWDSQGEDDEYDE--------DWIPIIALMGCAGLIWLVSMLGNALPAATPSLGM 354          
BLAST of Ggra6432.t1 vs. uniprot
Match: A0A7S2ZIF8 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZIF8_9RHOD)

HSP 1 Score: 75.5 bits (184), Expect = 1.230e-12
Identity = 40/104 (38.46%), Postives = 59/104 (56.73%), Query Frame = 0
Query:  102 LRELHTQRFSQLSSRRDALSRRGAYAIRAHDGDVVYMGYSKNVAAKLLFHHTRVPQHCVSFQVYAPPLPPHLLTPDVLEGVLEYWVRETGGVPVGNAVDRALWE 205
            L +L       L++R    +R GAYA+     ++ Y+GYS+NV AKL  H    PQ CV+F++Y P     + +P  LE VL+ W+ + G +P GN  +R LWE
Sbjct:   54 LSDLEPVSLEALNNRPLQYARVGAYAVFDGADELRYVGYSRNVFAKLRLHAVLQPQACVTFRLYFPAADQDV-SPQDLENVLDMWIVQNGKIPSGNTTERELWE 156          
BLAST of Ggra6432.t1 vs. uniprot
Match: A0A7S3EAU3 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EAU3_9RHOD)

HSP 1 Score: 75.5 bits (184), Expect = 5.610e-12
Identity = 40/104 (38.46%), Postives = 59/104 (56.73%), Query Frame = 0
Query:  102 LRELHTQRFSQLSSRRDALSRRGAYAIRAHDGDVVYMGYSKNVAAKLLFHHTRVPQHCVSFQVYAPPLPPHLLTPDVLEGVLEYWVRETGGVPVGNAVDRALWE 205
            L +L       L++R    +R GAYA+     ++ Y+GYS+NV AKL  H    PQ CV+F++Y P     + +P  LE VL+ W+ + G +P GN  +R LWE
Sbjct:   54 LSDLEPVSLEALNNRPLQYARVGAYAVFDGADELRYVGYSRNVFAKLRLHAVLQPQACVTFRLYFPAADQDV-SPQDLENVLDMWIVQNGKIPSGNTTERELWE 156          
BLAST of Ggra6432.t1 vs. uniprot
Match: A0A7S2ZJG2 (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZJG2_9RHOD)

HSP 1 Score: 75.5 bits (184), Expect = 6.760e-12
Identity = 40/104 (38.46%), Postives = 59/104 (56.73%), Query Frame = 0
Query:  102 LRELHTQRFSQLSSRRDALSRRGAYAIRAHDGDVVYMGYSKNVAAKLLFHHTRVPQHCVSFQVYAPPLPPHLLTPDVLEGVLEYWVRETGGVPVGNAVDRALWE 205
            L +L       L++R    +R GAYA+     ++ Y+GYS+NV AKL  H    PQ CV+F++Y P     + +P  LE VL+ W+ + G +P GN  +R LWE
Sbjct:   54 LSDLEPVSLEALNNRPLQYARVGAYAVFDGADELRYVGYSRNVFAKLRLHAVLQPQACVTFRLYFPAADQDV-SPQDLENVLDMWIVQNGKIPSGNTTERELWE 156          
BLAST of Ggra6432.t1 vs. uniprot
Match: A0A7S0G772 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G772_9RHOD)

HSP 1 Score: 73.6 bits (179), Expect = 3.210e-11
Identity = 38/93 (40.86%), Postives = 56/93 (60.22%), Query Frame = 0
Query:  113 LSSRRDALSRRGAYAIRAHDGDVVYMGYSKNVAAKLLFHHTRVPQHCVSFQVYAPPLPPHLLTPDVLEGVLEYWVRETGGVPVGNAVDRALWE 205
            L++R    ++ GAYA+     ++ Y+GYS+NV AKL  H    PQ CVSF++Y P     + +P  LE VL+ W+ + G +P GN  +R LWE
Sbjct:   65 LNNRPLQYAKVGAYAVFDGADELRYVGYSRNVFAKLRLHSILQPQACVSFRLYFPDAGRDV-SPQDLENVLDMWIVQNGKIPSGNTTERNLWE 156          
BLAST of Ggra6432.t1 vs. uniprot
Match: M1US10 (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1US10_CYAM1)

HSP 1 Score: 73.2 bits (178), Expect = 1.510e-10
Identity = 43/100 (43.00%), Postives = 54/100 (54.00%), Query Frame = 0
Query:  112 QLSSRRDALSRRGAYAIRAHDGDVVYMGYSKNVAAKLLFHHTRVPQHCVSFQVYAPPLPPHLLTPDVLEGVLEYWVRETGGVPVGN-AVDRALWEPAVEP 210
            +LS + +   R GAYA+   +  + Y+GY+KNV AKL  H    P  C  F+ Y P       TPDVLE VL  W+RE G VP GN  +DR  WE    P
Sbjct:  163 ELSRKPERWERTGAYAVFDEERTLRYVGYTKNVLAKLQVHRKLQPSLCRYFKTYFPTRGSQEATPDVLESVLCDWIRENGRVPSGNYQLDR--WESMPSP 260          
The following BLAST results are available for this feature:
BLAST of Ggra6432.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3J6046.780e-7053.26Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
S0F2T41.440e-6043.84Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S2ZIF81.230e-1238.46Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S3EAU35.610e-1238.46Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S2ZJG26.760e-1238.46Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A7S0G7723.210e-1140.86Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M1US101.510e-1043.00Uncharacterized protein n=2 Tax=cellular organisms... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 235..259
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..72
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 204..259
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 322..345
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..321
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 346..354
NoneNo IPR availableTMHMMTMhelixcoord: 323..345

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000918_piloncontigtig00000918_pilon:216532..217711 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6432.t1Ggra6432.t1Gracilaria gracilis GNS1m malemRNAtig00000918_pilon 216532..217711 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6432.t1 ID=Ggra6432.t1|Name=Ggra6432.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=355bp
MEAFALAPRVAHFAPLHQQRLHTQQQQQQRLAARCARRRATHTRRAVAPM
RCAASRRADEPPPPPPPQPQPQQWTDSRLSAPGGGGDADDDAALSSGTGF
SLRELHTQRFSQLSSRRDALSRRGAYAIRAHDGDVVYMGYSKNVAAKLLF
HHTRVPQHCVSFQVYAPPLPPHLLTPDVLEGVLEYWVRETGGVPVGNAVD
RALWEPAVEPPPPAQRKPAEEQVPLRERSSPPRSARARASAQPSSSSSSP
PSSSSTFSDAFRATAAPGVDWSASEHDYVHVHVDPFDAFSASGKRAAGSR
SSSAWQHDEHDEGGGANARADWVPILALMGVAGLIWLIGVLGNALPAATP
SMGM*
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