Ggra6431.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6431.t1
Unique NameGgra6431.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length489
Homology
BLAST of Ggra6431.t1 vs. uniprot
Match: A0A2V3JBK5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3JBK5_9FLOR)

HSP 1 Score: 711 bits (1834), Expect = 1.850e-254
Identity = 356/500 (71.20%), Postives = 390/500 (78.00%), Query Frame = 0
Query:    1 MPPASYFTPNKSSPILRHFARSVPTPALLCSVALAFFVFGVLFSRNVAAMFDASSPQHFGLPTRRL--------ATARAVLNLTHV----HPDHNLVEPHADSQPLQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADCCVGMWRSWPVSQQYDFSHLYQVAQHLNFSRNTLLNYFHMHKTGGVTTKVEVMVLIRRYENRVQLTNRGRPLTVIETCYQQNYTNPDEGNRLENTWHCDFGQVEGFTPQKLASIDMVMGHQYWEEGCEMYFGPIRDVKHFSIFRHPLARKLSFFYHFFVRNLQRDENDVGKDEVISFLLGDSMPENDALTRDAGPNYYASRMISDGVTGFVNHRYVIAKHQQEQAIATVLHKLQHKYAFVGLQLQPEASQCMLQKMIQVFAHVHGLDKMYGTPKLAESKKRLNVGGYPWTPKKVWAAMTPEQRQRYRDVEKVDLAIYEHVVQRFKEDLKVFACEHRVHADQWAEDQFDQV 488
            MP  S  T  K   ++    RS+PT ALLC+VALAFFVFGVLFS +V++MFDASSPQHFGLPTR L          A A     H+    H + + V  H    P QQ                                         DCCVGMWRSWP+SQ YD++HL+QVA HLNF+ NTLLNYFHMHKTGGVTTKVEVMVLIRRYENR+Q+T   RPLTVIETCYQQNYT+P E NRLE+TWHCDFGQVEGFTP KLA+IDMVMGHQYWEEGCE YFGPIRDVKHFSIFRHPLARKLSFFYHFFVRNLQRDEN V KDEVI+FLLGD MPENDALTRDAGPNYYASRMISDGVTGFVNHRYVI KH++E+AIA VLHKLQ+KYAFVGLQLQPEASQCMLQKM+QVFAHVHGLDKMYGTPKL+ESKKRLN GGYPWTP+K+W  MT EQRQRYR+VE+VDLAIY+HVVQRFKEDLK FACEHRVH DQW ED+FD +
Sbjct:    1 MPLPSPITAKKRHHLVSSLRRSMPTYALLCTVALAFFVFGVLFSHSVSSMFDASSPQHFGLPTRNLNLLNHAANRPAAAPHQRPHIDAAAHIEQHSVPEHPAEHPHQQHTAHNAPPAAAAQHRDSDNPP-------------------PDCCVGMWRSWPISQHYDYTHLHQVATHLNFTNNTLLNYFHMHKTGGVTTKVEVMVLIRRYENRIQMTTANRPLTVIETCYQQNYTDP-EHNRLESTWHCDFGQVEGFTPHKLATIDMVMGHQYWEEGCETYFGPIRDVKHFSIFRHPLARKLSFFYHFFVRNLQRDENHVSKDEVIAFLLGDGMPENDALTRDAGPNYYASRMISDGVTGFVNHRYVIPKHKEEEAIANVLHKLQNKYAFVGLQLQPEASQCMLQKMVQVFAHVHGLDKMYGTPKLSESKKRLNTGGYPWTPRKIWGVMTAEQRQRYREVERVDLAIYDHVVQRFKEDLKAFACEHRVHHDQWIEDRFDDL 480          
BLAST of Ggra6431.t1 vs. uniprot
Match: A0A2V3IWK6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWK6_9FLOR)

HSP 1 Score: 276 bits (705), Expect = 9.960e-83
Identity = 134/310 (43.23%), Postives = 202/310 (65.16%), Query Frame = 0
Query:  166 NFSRNTLLNYFHMHKTGGVTTKVEVMVLIRRYENRVQLTNRGRPLTVIETCYQQNYTNPDEGNRLENTWHCDFGQVEGFTPQKLASIDMVMGHQYWEEGCEMYFGPIRDVKHFSIFRHPLARKLSFFYHFFVRNLQRDENDVGKDEVISFLLGDSMPENDALTRDAGPNYYASRMISDGVTGFVNHRYVIAKHQQEQAIATVLHKLQHKYAFVGLQLQPEASQCMLQKMIQVFAHVHGLDKMYGTPKLAESKKRLNVGGYPWTPKKVWAAMTPEQRQRYRDVEKVDLAIYEHVVQRFKEDLKVFACEHRV 475
            NF  NT LNYFH+HKTGGV+ K  +       EN+V  T+ G+ + V++TC+      P  G  +E  W CD+G +E  +  +   ID+++GHQYWE+G E Y+ P RD+++F++ RHPL RK+SFFYHFFVRN  + E  V  +E+I F++G  MPE+  L RDAGPNYYASR+ SDG +GF NH + + + +    +   + +L+ K+ F+GLQ Q +AS CML+K +  F+  HG++++ G   + ++++R+N G Y +T K VW  M+ ++R  ++ VEKVDLAIY+  V+ F E ++ F C H V
Sbjct:  262 NFDSNTALNYFHLHKTGGVSFKERLFDFFN-LENKV--TSLGKRVNVLDTCHMSGPDRPALG--IEAQWSCDWGSMEQLSEAERDQIDVILGHQYWEKGAE-YWVPNRDLRYFTVMRHPLHRKISFFYHFFVRNAGKKEESVQFEELIRFIVGKDMPES-TLIRDAGPNYYASRLCSDGFSGFENHMFRVDEEKSNDMVRKSIERLRRKFVFIGLQTQEKASLCMLRKSVAAFSEAHGIEELDGLELIDKARERMNSGSYSYTGKIVWEKMSEQERNEFKRVEKVDLAIYQESVKMFDEMVRKFGCRHLV 564          
BLAST of Ggra6431.t1 vs. uniprot
Match: A0A2V3IXG8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXG8_9FLOR)

HSP 1 Score: 210 bits (535), Expect = 5.920e-58
Identity = 115/323 (35.60%), Postives = 180/323 (55.73%), Query Frame = 0
Query:  161 VAQHLNFSRNTLLNYFHMHKTGGVTTKVEVMVLIRRYENRVQLTNRGRPLTVIETCYQQNYTNPDEGNRLENTWHCDFGQVEGFTPQKLASIDMVMGHQYWEEGCEMYFGPIRDVKHFSIFRHPLARKLSFFYHFFVRNLQRDENDVGKDEVISFLLGDSMPENDALTRDAGPNYYASRMISDGVTGFVNH---RYVIAKHQQEQAIATVLHKLQHKYAFVGLQLQPEASQCMLQKMIQVFAHVHGLDKMYGTPKLAESKKRLNVGGYPWTPKKVWAAMTPEQRQRYRDVEKVDLAIYEHVVQRFKEDLKVFACEHRVHADQW 480
            +A+ LNF+  T +N+ H HKTGGV+ K     L + Y  + +    G  + V + CY +  +N D        W CD+  +   +  +   +D   GHQ+W  G        RDV+ F+I RHP  RK+SFFYHFFVR + R E D+  +E+  FLL D +  N  L RD GPNY A R++SDGV G+V +   RY   +  +++ +A    KL   Y FVGLQ++  A++CML+K+++ + +V+ +D       + +  ++LN G Y    K++W   + E+R  +   EKVDL IYE   + FK+ +K+F C  R+ A+++
Sbjct:  250 LAEVLNFTPATAINFMHFHKTGGVSFKTS---LHKFYYEKYK--KNGEKVRVRDACYSRKNSNADPSTPSFMMWRCDWDPIREMSESERNKLDFTFGHQFWGNGVGTLLNK-RDVRSFTIMRHPFDRKVSFFYHFFVREVGRREEDITFEEIRDFLLYDKLAINADLGRDLGPNYMAGRLLSDGVQGYVGNNSFRYYDVEPHRKREVAEEALKLVRDYVFVGLQVESGAAKCMLKKVVEQYNNVNDVDNS-NLELIDDGAEKLNSGSYSLGAKRIWGMFSDEERTLFDRKEKVDLLIYEEGERLFKKHVKLFGCSDRIVAEKY 565          
BLAST of Ggra6431.t1 vs. uniprot
Match: R7QI20 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI20_CHOCR)

HSP 1 Score: 190 bits (483), Expect = 1.760e-50
Identity = 111/314 (35.35%), Postives = 170/314 (54.14%), Query Frame = 0
Query:  165 LNFSRNTLLNYFHMHKTGGVTTKVEVMVLIRRYENRVQLTNRGRPLTVIETCYQQNYTNPDEGNRLENTWHCDFGQVEGFTPQKLASIDMVMGHQYWEEGCEMYFGPIRDVKHFSIFRHPLARKLSFFYHFFVRNLQRDENDVGKDEVISFLLGDSMPENDALTRDAGPNYYASRMISDGVTGFVN---HRYVIAKHQQEQAIATVLHKLQHKYAFVGLQLQPEASQCMLQKMIQVFAHVHGLDKMYGTPKLAESKKRLNVGGYPWTPKKVWAAMTPEQRQRYRDVEKVDLAIYEHVVQRFKEDLKVFACEHRV 475
            L+F+  T +N+ H HKTGGV+ K  + V   R     +  + G  +   ++CY++  T    G +    W CD+  +     Q+    D V GHQ+   G +     +RD++ F++ RHP  RK+SF+YHFFVR + R E++V  +EV  FLL D +  +  L RD GPNY A R++SDG  GF     H Y   + +Q + +     K+  KY FVGLQ +  AS+CML+K ++V+  V+G+  + G   +     RLN G Y  + + +W   + E R  +   EKVDLAIY    + F++ ++VF C  RV
Sbjct:  261 LHFTPKTAINFMHFHKTGGVSFKTSLHVFYNR-----KFKSDGSQVVARDSCYKREST-LGGGEQSFAVWRCDWDPILQLNNQERNRHDFVFGHQFGLHGVDELLN-LRDLRTFTVMRHPFDRKVSFYYHFFVREVGRKESEVSFEEVREFLLFDKLRIDAELGRDLGPNYMAGRLLSDGKEGFTGNSYHSYYGVEGRQVEGVVEKAVKIIGKYVFVGLQEESAASRCMLRKTMEVYNKVNGVSNV-GLEAIDGRNGRLNSGSYSMSAQAIWGRFSMEDRIVFDMKEKVDLAIYREGSRLFRKHVQVFGCADRV 566          
The following BLAST results are available for this feature:
BLAST of Ggra6431.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3JBK51.850e-25471.20Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IWK69.960e-8343.23Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IXG85.920e-5835.60Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QI201.760e-5035.35Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 94..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..132
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..44
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 45..488
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 27..39
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 40..44
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 168..484
e-value: 6.2E-22
score: 80.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000918_piloncontigtig00000918_pilon:213538..215004 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6431.t1Ggra6431.t1Gracilaria gracilis GNS1m malemRNAtig00000918_pilon 213538..215004 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6431.t1 ID=Ggra6431.t1|Name=Ggra6431.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=489bp
MPPASYFTPNKSSPILRHFARSVPTPALLCSVALAFFVFGVLFSRNVAAM
FDASSPQHFGLPTRRLATARAVLNLTHVHPDHNLVEPHADSQPLQQQQQQ
QQQQQQQQQQQQQQPPHHEPPPVAAAAAADHHHNPPADCCVGMWRSWPVS
QQYDFSHLYQVAQHLNFSRNTLLNYFHMHKTGGVTTKVEVMVLIRRYENR
VQLTNRGRPLTVIETCYQQNYTNPDEGNRLENTWHCDFGQVEGFTPQKLA
SIDMVMGHQYWEEGCEMYFGPIRDVKHFSIFRHPLARKLSFFYHFFVRNL
QRDENDVGKDEVISFLLGDSMPENDALTRDAGPNYYASRMISDGVTGFVN
HRYVIAKHQQEQAIATVLHKLQHKYAFVGLQLQPEASQCMLQKMIQVFAH
VHGLDKMYGTPKLAESKKRLNVGGYPWTPKKVWAAMTPEQRQRYRDVEKV
DLAIYEHVVQRFKEDLKVFACEHRVHADQWAEDQFDQV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase