Ggra6427.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6427.t1
Unique NameGgra6427.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length726
Homology
BLAST of Ggra6427.t1 vs. uniprot
Match: A0A2V3IJT4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJT4_9FLOR)

HSP 1 Score: 357 bits (917), Expect = 1.980e-109
Identity = 167/333 (50.15%), Postives = 238/333 (71.47%), Query Frame = 0
Query:  393 PSPSVASTCQMSCAAFKIVPVRTERPSETPELFMEDLLEEAYKRQNSVAHTLGRLVLDEACKGLSRVLNPADDTDIQMFGIQLRRADYAACEQDYHRCARDNIPIFAISYTHRDRGVGRNRFSEDQWENFEVAMSVLAKSNVREVRIWLDQCLWLRDSNLGCWAHTGIIPYVIWPVFSLGVRAPERDRTFDSFYRVWPYLEETAALWSLGVITTSEIRQENENEPPSPHTVIRHNMRKCVDPQACLYLLFHAICDGKITDLECACKEDVHELTDMAMFNMDHDTEVVIVGSNWRARTSPLEGRSGARSVSYPRSTPKSQFITAFSSGDLYLDV 725
            PS  V+  C +S     ++PV+ ERPSE PEL ME+LL+ A++RQ S  + LG  +LDEA KGLSRV++P DD DIQ+F +QLRR D++ACE D+ R  RD IP FA+SYT +DR VGR  F + QW+NF  AM++LA S +R+VR+WLDQCLWLRD+NL CWAHTGI+PYVIWPV SLG++    DRT DS+ RVWP++EE A L S+GV+T  E+ Q  E    +   ++++N R C++ +  +  +FH IC+G + +LEC+C EDV EL DMA FNM+++ + VI+G NWR+R +P++    +R     RS+ KS+++ ++S+G + L++
Sbjct:  386 PSSYVSQNCHVS--GVNVIPVQVERPSEPPELLMEELLDAAFERQGSALNILGSTLLDEARKGLSRVIDPGDDADIQLFSVQLRRMDFSACESDFKRGGRDGIPCFALSYTRKDRMVGRFPFEKLQWDNFRRAMNLLASSGIRQVRVWLDQCLWLRDANLVCWAHTGIVPYVIWPVVSLGLKIDTADRTIDSYERVWPFVEEVAGLLSMGVLTFCEMSQGGE----ALEHIVQYNQRVCLELEVSILAIFHIICEGALNELECSCPEDVMELVDMAQFNMENECQDVIIGGNWRSRIAPVQRCPQSRPF---RSSAKSKYLASYSAGKVPLNL 709          
BLAST of Ggra6427.t1 vs. uniprot
Match: R7QV39 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QV39_CHOCR)

HSP 1 Score: 244 bits (622), Expect = 2.150e-69
Identity = 122/274 (44.53%), Postives = 172/274 (62.77%), Query Frame = 0
Query:  423 ELFMEDLLEEAYKRQNSVAHTLGRLVLDEACKGLSRVLNPADDTDIQMFGIQLRRADYAACEQDYHRCARDNIPIFAISYTHRDRGVGRNRFSEDQWENFEVAMSVLAKSNVREVRIWLDQCLWLRDSNLGCWAHTGIIPYVIWPVFSLGVRAPERDRTFDSFYRVWPYLEETAALWSLGVITTSEIRQENENEPPSPHTVIRHNMRKCVDPQACLYLLFHAICDGKITDLECACKEDVHELTDMAMFNMDHDTEVVIVGSNWRARTSPLEGRS 696
            E+  +DLL +     +S    LG   + EA KGLSRVL    D D+++F  QL+ +D AAC  D+  C  D IP FAISY H D   GR +FS +QW++F+ A   +  S V+E+RIWLDQCLWLRD++ G WAHTG++PYV+WPV SLGV+A   ++T D+  R+WP++EE A LWS+GV+ T E+R +  +        +   +R   +P+  + LL   I  G +  L+   +EDV EL D+A +N+  DTE  IVGS+WR+R + LE RS
Sbjct:   35 EIISQDLLMQVQTCPHSARVVLGDTAVLEARKGLSRVLQVGSDGDLELFAQQLKSSDNAACGPDFREC-NDKIPCFAISYVHSDTPTGRFKFSVEQWDSFKAACEEIFGSGVKEIRIWLDQCLWLRDASQGAWAHTGLMPYVMWPVISLGVKAAGAEKTLDTNERMWPFVEEVAGLWSMGVMITRELRGKTMDT--GSRRWLSFQLRHKCEPEESMRLLLLNIFHGAVDGLQTGWQEDVEELKDIAKWNVLCDTEHAIVGSDWRSRMAKLERRS 305          
BLAST of Ggra6427.t1 vs. uniprot
Match: R7QT89 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QT89_CHOCR)

HSP 1 Score: 238 bits (607), Expect = 3.830e-67
Identity = 119/273 (43.59%), Postives = 171/273 (62.64%), Query Frame = 0
Query:  423 ELFMEDLLEEAYKRQNSVAHTLGRLVLDEACKGLSRVLNPADDTDIQMFGIQLRRADYAACEQDYHRCARDNIPIFAISYTHRDRGVGRNRFSEDQWENFEVAMSVLAKSNVREVRIWLDQCLWLRDSNLGCWAHTGIIPYVIWPVFSLGVRAPERDRTFDSFYRVWPYLEETAALWSLGVITTSEIRQENENEPPSPHTVIRHNMRKCVDPQACLYLLFHAICDGKITDLECACKEDVHELTDMAMFNMDHDTEVVIVGSNWRARTSPLEGR 695
            E+  +DLL +   R +S    LG   + EA KGLSRVL    + D+++F  QL+ +D AACE D+ R   D IP FAISY H D   GR +FS +QW++F+ A   +  S V+E+RIWLDQCLWLRD++ G WAHTG++PYV+WPV SLGV+A   ++T D+  R+WP++EE A LWS+GVI T E+R +  +        +   +R   +P+  + LL   I  G +  L+   +EDV EL D+A +N+  +T  +IVGS+W+ R + L  R
Sbjct:   35 EIISQDLLMQVQTRPHSARVVLGDTAVLEARKGLSRVLQVGSNGDLELFAQQLKSSDNAACEPDF-RERNDKIPCFAISYVHSDTPTGRFKFSVEQWDSFKAACEEIFGSGVKEIRIWLDQCLWLRDASQGAWAHTGLMPYVMWPVISLGVKAAGGEKTLDTNERMWPFVEEVAGLWSMGVIITRELRGKTMDT--GSRRWLSFQLRHKCEPEESMRLLLLNIFHGAVDGLQTGWQEDVEELKDLAKWNILLETSSIIVGSDWKLRVANLRRR 304          
BLAST of Ggra6427.t1 vs. uniprot
Match: A0A2V3IH57 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH57_9FLOR)

HSP 1 Score: 165 bits (417), Expect = 2.290e-44
Identity = 77/116 (66.38%), Postives = 95/116 (81.90%), Query Frame = 0
Query:  403 MSCAAFKIVPVRTERPSETPELFMEDLLEEAYKRQNSVAHTLGRLVLDEACKGLSRVLNPADDTDIQMFGIQLRRADYAACEQDYHRCARDNIPIFAISYTHRDRGVGRNRFSEDQ 518
            MSCA+F IVPV+T+RPS TP+LFM++LL+E + R+  V  +LG+LV DEACK LSRVL+PADD D Q+FGIQLR  D+AA EQ+YHRC RDN+P FAI YTHRDR V +N F+EDQ
Sbjct:    1 MSCASFNIVPVQTQRPSATPDLFMDELLDEVHNRKRYVLDSLGQLVFDEACKRLSRVLHPADDEDTQLFGIQLRSMDFAAFEQNYHRCDRDNVPFFAILYTHRDRAVVQNTFTEDQ 116          
The following BLAST results are available for this feature:
BLAST of Ggra6427.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IJT41.980e-10950.15Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QV392.150e-6944.53Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QT893.830e-6743.59Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IH572.290e-4466.38Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..395
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..155
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 289..304
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..218
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..246
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 374..395
NoneNo IPR availablePANTHERPTHR48138:SF2KERATINOCYTE PROLINE-RICH PROTEINcoord: 208..706
NoneNo IPR availablePANTHERPTHR48138KERATINOCYTE PROLINE-RICH PROTEIN-RELATEDcoord: 208..706

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000918_piloncontigtig00000918_pilon:157919..160096 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6427.t1Ggra6427.t1Gracilaria gracilis GNS1m malemRNAtig00000918_pilon 157919..160096 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6427.t1 ID=Ggra6427.t1|Name=Ggra6427.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=726bp
MPTGGKTSKLISISISAAQQVLHKTADCLDKLKIDPAASHSSSSAGQPQY
SYPPPSIYPYPPGAATPPQFYPHAPTPPPPPPPPPPPSNPPGTAPTPPPP
PSDQPFAAPPNSLYSPHRPTHAPHVADQSSYASPPSHPPSSTSYPSPPYP
GRPPSYEHAPNTSTPSLRPPPAAPHHPSHPHDASASTPNLYPLPSPSAPP
LTPPPGYPQPPQPSHALPPKYYSRPAHNSSPATVSQQNNASYDASHLQRP
YVSAPDLPSPEYDQYQPASPPPNSYHPGHIPHSHSSPAVPVHYPSSSGNH
VPSRPSSRYDPVGGRLNASPPEASQPAPEGYPHPPCEADSESYHTANAPL
QSPFILPSALAGTPDYPHGSPSAPYSATPYSPTASASEGTGPPSPSVAST
CQMSCAAFKIVPVRTERPSETPELFMEDLLEEAYKRQNSVAHTLGRLVLD
EACKGLSRVLNPADDTDIQMFGIQLRRADYAACEQDYHRCARDNIPIFAI
SYTHRDRGVGRNRFSEDQWENFEVAMSVLAKSNVREVRIWLDQCLWLRDS
NLGCWAHTGIIPYVIWPVFSLGVRAPERDRTFDSFYRVWPYLEETAALWS
LGVITTSEIRQENENEPPSPHTVIRHNMRKCVDPQACLYLLFHAICDGKI
TDLECACKEDVHELTDMAMFNMDHDTEVVIVGSNWRARTSPLEGRSGARS
VSYPRSTPKSQFITAFSSGDLYLDV*
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