Ggra6423.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6423.t1
Unique NameGgra6423.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length294
Homology
BLAST of Ggra6423.t1 vs. uniprot
Match: A0A2V3J628 (Rhomboid-like protein 18 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J628_9FLOR)

HSP 1 Score: 360 bits (925), Expect = 2.050e-122
Identity = 193/291 (66.32%), Postives = 234/291 (80.41%), Query Frame = 0
Query:    1 MLNQGGLPGFYNAPITKVVIVSVVLFTVFGSITSSQYRLTLQMTDVVQRLQIWRLLSHNLVFTTPGELIFGTILLYYFRQLERQLGSSRFASFAIISAVFYTAILASLQLIWSSVHSASGPYSLILACLVFFYFETPKLYRFEVLGALELSDKTFVYLIATQLLLLSSPRSLLSCAASILAGIIYRIPIIRENADMPVVIISLCSRYVLPLLGTTRHSSSRGRSRRHNDPNSANLRRLEAAAVPPRQTTTHEAETSVGTLVSMGFSEEQATTALQRTDNDLQRATELLLSE 291
            MLN G  PGFY+AP+TKV+IVSVVL TVFGSI  SQ  +TLQM DVV+ L +WRLL+HN VFTTPGEL+FG +L+YYFRQ ERQLGSSRFASFAII+A+ YT ILASLQ++  S+  ASGPYSL+ A LVFF+FETPKLYRFE+LGA+E SDK FVYL+A QL++ S  RSL+S +A++ +GI+YRIP+IRENAD+P  I+S CSRYVLPLLGT R  + RGRSRR +D  SA+           RQTTT ++ET++  +VSMGFSE+QA  AL+RT NDLQRATELLLSE
Sbjct:    1 MLNSGH-PGFYHAPVTKVIIVSVVLCTVFGSIMGSQPHMTLQMNDVVEHLHLWRLLTHNFVFTTPGELLFGMVLMYYFRQFERQLGSSRFASFAIITAIIYTTILASLQVLLPSISPASGPYSLVFASLVFFFFETPKLYRFEILGAVEFSDKAFVYLMAMQLMISSPLRSLVSFSAALFSGIVYRIPLIRENADLPDFIVSFCSRYVLPLLGTDRLLTPRGRSRRSDDHASAHXXXXXXXXXXXRQTTTPQSETNLDVIVSMGFSEQQAAMALERTHNDLQRATELLLSE 290          
BLAST of Ggra6423.t1 vs. uniprot
Match: S0F3I4 (UBA domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F3I4_CHOCR)

HSP 1 Score: 167 bits (422), Expect = 1.280e-47
Identity = 100/205 (48.78%), Postives = 136/205 (66.34%), Query Frame = 0
Query:   85 LGSSRFASFAIISAVFYTAILASLQLIWSSVHSASGPYSLILACLVFFYFETPKLYRFEVLGALELSDKTFVYLIATQLLLLSSPRSLLSCAASILAGIIYRIPIIRENADMPVVIISLCSRYVLPLLGTTRHSSSRGRSRRHNDPNSANLRRLEAAAVPPRQTTTHEAETSVGTLVSMGFSEEQATTALQRTDNDLQRATELLL 289
            +GSSR+A FA+++A F+TA+L   Q +  ++  ASGPY+L+ A LV F+FETPK Y F++LGALELSDK+F YL+A QL   S PRSL S AA ++AG++YR+P IR  AD P  +IS CS YVLPLLGT +  +SR  +RR  D      R      + P + T  +    + TL +MGFS+E +  AL+R  +D+ RATE LL
Sbjct:    1 MGSSRYAFFALLTAFFHTALLCVYQYVAPTIAPASGPYALVFANLVHFFFETPKTYHFQLLGALELSDKSFAYLLAIQLACSSPPRSLPSLAAGVIAGLLYRVPAIRSRADFPDGLISACSTYVLPLLGTGQRGASR--TRRGYD------RVRPVGVMDPAEGTVSQHH--IETLEAMGFSQEDSAAALRRHHDDVHRATEQLL 195          
BLAST of Ggra6423.t1 vs. uniprot
Match: A0A6J1IRZ2 (rhomboid-like protein 20 n=1 Tax=Cucurbita maxima TaxID=3661 RepID=A0A6J1IRZ2_CUCMA)

HSP 1 Score: 161 bits (408), Expect = 2.180e-44
Identity = 114/294 (38.78%), Postives = 162/294 (55.10%), Query Frame = 0
Query:    4 QGGLPGFYNAPITKVVIVSVVLFTVFGSITSSQYRLTLQMTDVVQRLQIWRLLSHNLVFTTPGELIFGTILLYYFRQLERQLGSSR---FASFAIISAVFYTAILASLQLIWSSVHSASGPYSLILACLVFFYFETPKLYRFEVLGALELSDKTFVYLIATQLLLLSSPRSLLSCAASILAGIIYRIPIIR-ENADMPVVIISLCSRYVLPLLGTTRHSSSRGRSRRHNDPNSANLRRLEAAAVPPRQTTTHEAETSVGTLVSMGFSEEQATTALQRTDNDLQRATELLLSEGS 293
             GG  GF NAP+T+  +++  LFT+F  I     +L L   DV+ +L+IW+L++    F++  EL+FG  LLYYFR  ERQ+GS++   F  F+II+++ +  +  SL    ++    SGPY L+ A  V F+F+ P   RF V G    SDK+F+YL   QLLL S  RS+L     ILAG +YR+ +     A  P  + S  SR+ LP  G    + +R  + R N P+    R++E +  PP  T T   E S+ TLVSMGF    A  AL    ND+  AT +LL   S
Sbjct:    2 NGGPSGFTNAPVTRSFVIASALFTIFFGIQGRSIKLGLSYQDVIVKLRIWKLVTSVFAFSSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIITSLLFEVLAISLLKDPAANLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGV-RFSDKSFIYLAGLQLLLSSWRRSILPGICGILAGSLYRLNVFGIRKAKFPEFVSSFFSRFSLPSAGNPPAAPTR--NVRGNMPSFVG-RQVERSH-PPVPTATEPPENSIATLVSMGFDRNSARQALVHAGNDVNIATNMLLESQS 290          
BLAST of Ggra6423.t1 vs. uniprot
Match: rhomboid-like protein 20 n=1 Tax=Morus notabilis TaxID=981085 RepID=UPI000CED69F7 (rhomboid-like protein 20 n=1 Tax=Morus notabilis TaxID=981085 RepID=UPI000CED69F7)

HSP 1 Score: 160 bits (406), Expect = 4.210e-44
Identity = 117/296 (39.53%), Postives = 161/296 (54.39%), Query Frame = 0
Query:    4 QGGLPGFYNAPITKVVIVSVVLFTVFGSITSSQYRLTLQMTDVVQRLQIWRLLSHNLVFTTPGELIFGTILLYYFRQLERQLGSSRFASFAIISAVF-YTAILASLQLIWSSVHS--ASGPYSLILACLVFFYFETPKLYRFEVLGALELSDKTFVYLIATQLLLLSSPRSLLSCAASILAGIIYRIPIIR-ENADMPVVIISLCSRYVLPLLGTTRHSSSRGRSRRHNDPNSAN--LRRLEAAAVPPRQTTTHEAETSVGTLVSMGFSEEQATTALQRTDNDLQRATELLLSEGS 293
             GG  GF NAP+T+  +++  LFTVF  I     RL L   D+  + +IW+L+     F++  EL+FG  LLYYFR  ERQ+GS++++ F + S  F    ++ +L L+     +  ASGPY LI A  V F+F+ P   RF V G    SDK+F+YL   QLLL S  RS+L     ILAG IYR+ I+R   A  P  I SL SR   P +G    + SRG     N P+ A   + R   +++P   +    +E S+ TLVSMGF    A  AL +  ND+  AT +LL   S
Sbjct:    2 NGGPSGFNNAPVTRAFVIACALFTVFFGIQGRSNRLGLSYMDIFGKFRIWKLVVSVFAFSSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSMTFSLLLVVIALALLKDLAKNLVASGPYGLIFASFVPFFFDIPVSTRFRVFGV-RFSDKSFIYLAGLQLLLSSWKRSILPGVCGILAGFIYRLNILRIRKAKFPEFITSLFSRLSWPSVGGPPAAPSRG-----NLPSFAGRPVERNYPSSMP--SSAMEPSEDSIATLVSMGFDRNNARQALVQARNDVNVATNILLEAQS 289          
BLAST of Ggra6423.t1 vs. uniprot
Match: A0A022PWK2 (UBA domain-containing protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022PWK2_ERYGU)

HSP 1 Score: 158 bits (400), Expect = 3.540e-43
Identity = 116/292 (39.73%), Postives = 154/292 (52.74%), Query Frame = 0
Query:    4 QGGLPGFYNAPITKVVIVSVVLFTVFGSITSSQYRLTLQMTDVVQRLQIWRLLSHNLVFTTPGELIFGTILLYYFRQLERQLGSSRFASFAIISAVFYTAILASLQLIW-----SSVHSASGPYSLILACLVFFYFETPKLYRFEVLGALELSDKTFVYLIATQLLLLSSPRSLLSCAASILAGIIYRIPIIR-ENADMPVVIISLCSRYVLPLLGTTRHSSSRGRSRRHNDPNSANLRRLEAAAVPPRQTTTHEAETSVGTLVSMGFSEEQATTALQRTDNDLQRATELLL 289
             GG  GF NAP+T++++++  LFTV   I      L     D+ ++LQIW+L+     F++  EL+FG  LLYYFR  ERQ+GS+++  F + S +  T++L  +   W     S     SGPY LI A  V F+F+ P   RF V      SDKTF+YL   QL L S  RS+L     ILAG +YR+ + R      P VI S  SR   P  GTT  + S  R+   + P  A+ RR EA A     T     E S+GTLVSMGF    A  AL    ND+  AT +LL
Sbjct:    2 NGGPSGFNNAPVTRIIVIASALFTVVFGIQGRSRNLPWSYQDIFKKLQIWKLIVTVFGFSSTPELVFGIYLLYYFRVFERQIGSNKYTVFILFSVI--TSLLLEVLAQWLLKDPSLNILTSGPYGLIFASFVPFFFDIPVSTRFRVFR-FNFSDKTFIYLAGLQLFLSSWRRSMLPGICGILAGSLYRLNVFRVRRVKFPEVIASFFSRLSWPSTGTTSPTRS-SRNVLGSAPTYAS-RRAEANAPALLSTLLEPPEESIGTLVSMGFDRNSARQALIHARNDINAATNILL 288          
BLAST of Ggra6423.t1 vs. uniprot
Match: A0A7S1TCX3 (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TCX3_9RHOD)

HSP 1 Score: 158 bits (399), Expect = 8.090e-43
Identity = 110/307 (35.83%), Postives = 173/307 (56.35%), Query Frame = 0
Query:    4 QGGLPGFYNAPITKVVIVSVVLFTVFGSITSSQYRLTLQMTDVVQRLQIWRLLSHNLVFTTPGELIFGTILLYYFRQLERQLGSSRFASFAIISAVFYTAILASLQLIW-------SSVHSASGPYSLILACLVFFYFETPKLYRFEVLGALELSDKTFVYLIATQLLLLSSPRSLLSCAASILAGIIYRIPIIRENA-DMPVVIISLCSRYVLPLLGTTRHSS-SRGRSRRHNDPNSANLRRLEAAAV----PPRQTT--------THEAETSVGTLVSMGFSEEQATTALQRTDNDLQRATELLL 289
              G PGF  AP++K VIV+  + T+  S+   + R+ +  + +V+R+   R++  N  F+TPGEL+FG ILLYYFRQ ERQ G++RFA+F +++ + Y     +  L+        + V  A+GPY+ + A L+ F+ +TP  Y F +LG L  SDK FVYL A QL++ ++P SL S   +++A  IYR   +  +A ++P  + S C  ++ PL+ ++     + G+S+     N+  L ++  +A     PP  TT            E +V  LV MGFS E+A  ALQR+ ND+  A  LL+
Sbjct:   10 HAGQPGFAYAPVSKCVIVACTVMTLLTSMLGPRGRMQMSYSALVERMGWHRVVLQNFAFSTPGELLFGMILLYYFRQFERQWGAARFAAFLLMTTILYNVFQVAFILVALADRVDRAQVTFATGPYAPLFASLLMFFLDTPPTYYFSLLGLLNASDKFFVYLTALQLVISNAPGSLHSGICALIAAAIYRSRHLGLSAIEIPPRVTSFCGTFLSPLIVSSGEVPLASGQSQ-----NADGLEQVGGSATVVTAPPGSTTGAADFLPSNSPTEENVEFLVHMGFSRERAIEALQRSGNDVHEAAGLLV 311          
BLAST of Ggra6423.t1 vs. uniprot
Match: rhomboid-like protein 20 n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CF564 (rhomboid-like protein 20 n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CF564)

HSP 1 Score: 156 bits (395), Expect = 1.960e-42
Identity = 113/290 (38.97%), Postives = 155/290 (53.45%), Query Frame = 0
Query:    4 QGGLPGFYNAPITKVVIVSVVLFTVFGSITSSQYRLTLQMTDVVQRLQIWRLLSHNLVFTTPGELIFGTILLYYFRQLERQLGSSRFASFAIISAV---FYTAILASLQLIWSSVHSASGPYSLILACLVFFYFETPKLYRFEVLGALELSDKTFVYLIATQLLLLSSPRSLLSCAASILAGIIYRIPIIR-ENADMPVVIISLCSRYVLPLLGTTRHSSSRGRSRRHNDPNSANLRRLEAAAVPPRQTTTHEAETSVGTLVSMGFSEEQATTALQRTDNDLQRATELLL 289
             GG  GF NAP+T+ V+++ VLFTV   I     +L     D+ ++LQIW+L+     F++  EL+ G  LLY+FR  ERQ+GS++++ F I SA+       ++  L    S     SGPY LI +  V FYF+ P   RF VLG  + S+KTF YL   QLLL S  RS+L     ILAG++YR+ I        P  I S  SR   P +G+    + RGR+   N P  A L+ +E        +T +  E S+ TLVSMGF    A  AL    ND+  AT +LL
Sbjct:    2 NGGPSGFNNAPVTRTVVITSVLFTVLFGIRGRSGKLGWSYQDIFKQLQIWKLIVPVFAFSSTPELVVGIYLLYFFRVFERQIGSNKYSVFIIFSAIVSLLLEVLVLRLHRDPSMKIMTSGPYGLIFSSFVPFYFDIPVSTRFRVLG-FQFSNKTFTYLAGLQLLLSSWKRSMLPGICGILAGLLYRLNIFHIRRLKFPNFIASFFSRLSWPSMGSAS-PTGRGRNVVGNAPTYAGLQ-VEGTYPARSSSTVNPPEDSIATLVSMGFDRNLARQALIHARNDINAATNILL 288          
BLAST of Ggra6423.t1 vs. uniprot
Match: A0A059A3J6 (UBA domain-containing protein n=7 Tax=Myrtoideae TaxID=1699513 RepID=A0A059A3J6_EUCGR)

HSP 1 Score: 157 bits (397), Expect = 3.390e-42
Identity = 121/298 (40.60%), Postives = 167/298 (56.04%), Query Frame = 0
Query:    1 MLNQGGLPGFYNAPITKVVIVSVVLFTVFGSITSSQYRLTLQMTDVVQRLQIWRLLSHNLVFTTPGELIFGTILLYYFRQLERQLGSSRFASFAIISAVFYTAILASLQLIWSSVHSA----SGPYSLILACLVFFYFETPKLYRFEVLGALELSDKTFVYLIATQLLLLSSPRSLLSCAASILAGIIYRIPIIR-ENADMPVVIISLCSRYVLPLLGTTRHSSSRGRSRRHNDPNSANLRRLEAAAVPPRQTTTHEAETSVGTLVSMGFSEEQATTALQRTDNDLQRATELLLSEGS 293
            M+N G   GF NAP+++  IV+   FTVF  I     +L +   D+ Q++Q+W+L+     F++  ELIFG  LLYYFR  ERQ+GS++F  F++ S +  + +L  L L   +V S+    SGPY++I A  V F+F+ P   RF VLG +  SDK+F+YL   QLLL S  RS+L     ILAG +YR+ + R   A  P  I S  SR  LP L T     S  R+   N P+ A+ +R   + VP   +T   +E SV TLVSMGF    A  AL +  ND+  AT +LL   S
Sbjct:   54 MMNVGP-SGFNNAPVSRAFIVATGAFTVFFGIRDRANKLGVSYQDIFQKMQMWKLIPAIFAFSSTPELIFGLYLLYYFRIFERQIGSNKFLVFSLFSTIV-SMVLQVLTLAVVNVPSSNLVSSGPYAVIFASFVPFFFDIPVSTRFRVLG-ISFSDKSFIYLAGLQLLLSSWKRSILPGICGILAGSLYRLNVFRIRKAKFPAPISSFFSR--LPGLSTGSARVSPTRNVVGNIPSFASHQRNHTS-VP---STVEPSEESVATLVSMGFDRNSARQALAQARNDVNTATNILLEAQS 342          
BLAST of Ggra6423.t1 vs. uniprot
Match: B7FJZ2 (UBA domain-containing protein n=7 Tax=NPAAA clade TaxID=2231382 RepID=B7FJZ2_MEDTR)

HSP 1 Score: 155 bits (392), Expect = 5.310e-42
Identity = 111/290 (38.28%), Postives = 156/290 (53.79%), Query Frame = 0
Query:    4 QGGLPGFYNAPITKVVIVSVVLFTVFGSITSSQYRLTLQMTDVVQRLQIWRLLSHNLVFTTPGELIFGTILLYYFRQLERQLGSSR---FASFAIISAVFYTAILASLQLIWSSVHSASGPYSLILACLVFFYFETPKLYRFEVLGALELSDKTFVYLIATQLLLLSSPRSLLSCAASILAGIIYRIPIIR-ENADMPVVIISLCSRYVLPLLGTTRHSSSRGRSRRHNDPNSANLRRLEAAAVPPRQTTTHEAETSVGTLVSMGFSEEQATTALQRTDNDLQRATELLL 289
             GG  GF NAP+T+  I++  LFT+F  I      L L   D+  +L+IW+L+     FT+  EL+FG  LLYYFR  ERQ+GS++   F  F++++++ +  +  +L    S+     GPY LI A  V F+F+ P   RF + G    SDK+F+YL   QLLL    RS+L     ILAG +YR+ +     A  P  I S  SR  LP +GT R +S+R      N P S   R++E     P  +    +E S+ TLVSMGF    A  AL +  ND+  AT +LL
Sbjct:    2 NGGPSGFTNAPVTRAFIIASALFTIFFGIQGRFNTLGLSYQDIFGKLRIWKLIMSVFSFTSTPELMFGLYLLYYFRVFERQIGSNKHSVFIVFSMLTSLLFEVVAVALLKDPSTTLVTPGPYGLIFASFVPFFFDIPVSTRFRICG-FHFSDKSFIYLAGLQLLLSKWKRSMLPGMCGILAGSLYRLNVFYIRKAKFPEFISSFFSRISLPSMGTPRTTSTRNVM--GNVP-SYPARQMERNYPAPTHSAVEPSEDSIITLVSMGFDRNSARQALVQARNDVNVATNILL 287          
BLAST of Ggra6423.t1 vs. uniprot
Match: A0A803QPP2 (UBA domain-containing protein n=3 Tax=Cannabaceae TaxID=3481 RepID=A0A803QPP2_CANSA)

HSP 1 Score: 154 bits (390), Expect = 9.990e-42
Identity = 112/294 (38.10%), Postives = 155/294 (52.72%), Query Frame = 0
Query:    4 QGGLPGFYNAPITKVVIVSVVLFTVFGSITSSQYRLTLQMTDVVQRLQIWRLLSHNLVFTTPGELIFGTILLYYFRQLERQLGSSRFASFAIISAVFYTAI-LASLQLIWSSVHS--ASGPYSLILACLVFFYFETPKLYRFEVLGALELSDKTFVYLIATQLLLLSSPRSLLSCAASILAGIIYRIPIIR-ENADMPVVIISLCSRYVLPLLGTTRHSSSRGRSRRHNDPNSANLRRLEAAAVPPRQTTTHEAETSVGTLVSMGFSEEQATTALQRTDNDLQRATELLLSEGS 293
             GG  GF NAP+T+  +++  LFT+F  +      L L   D+  + +IW+L+     F++  EL+FG  LLYYFR  ERQ+GS++++ F + S      + + +L  +     +   SGPY LI A  V F+F+ P   RF V      SDK+F+YL   QLLL S  RS+L  A  ILAGI+YR+ I R   A +P  I SL SR   P  G    + SRG     N P+ A  R +E    P   +    +E S+ TLVSMGF    A  AL +  ND+  AT +LL   S
Sbjct:    2 NGGPSGFNNAPVTRTFVIASALFTIFFGMQGRSNNLGLSYLDIFGKFRIWKLIVSAFAFSSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSLTVSLLLEVLALSFLKDPAKNLITSGPYGLIFASFVPFFFDIPVSTRFTVFNV-HFSDKSFIYLAGLQLLLSSWKRSILPGACGILAGILYRLNIFRIRKAKLPEFITSLFSRLSWPSAGNLPAAPSRG----GNVPSFAG-RPVERNYPPSIPSAVEPSEDSIATLVSMGFDRNNARQALVQARNDVNVATNILLEAQS 289          
The following BLAST results are available for this feature:
BLAST of Ggra6423.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J6282.050e-12266.32Rhomboid-like protein 18 n=1 Tax=Gracilariopsis ch... [more]
S0F3I41.280e-4748.78UBA domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A6J1IRZ22.180e-4438.78rhomboid-like protein 20 n=1 Tax=Cucurbita maxima ... [more]
rhomboid-like protein 20 n=1 Tax=Morus notabilis TaxID=981085 RepID=UPI000CED69F74.210e-4439.53rhomboid-like protein 20 n=1 Tax=Morus notabilis T... [more]
A0A022PWK23.540e-4339.73UBA domain-containing protein n=1 Tax=Erythranthe ... [more]
A0A7S1TCX38.090e-4335.83Hypothetical protein n=2 Tax=Compsopogon caeruleus... [more]
rhomboid-like protein 20 n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CF5641.960e-4238.97rhomboid-like protein 20 n=1 Tax=Olea europaea var... [more]
A0A059A3J63.390e-4240.60UBA domain-containing protein n=7 Tax=Myrtoideae T... [more]
B7FJZ25.310e-4238.28UBA domain-containing protein n=7 Tax=NPAAA clade ... [more]
A0A803QPP29.990e-4238.10UBA domain-containing protein n=3 Tax=Cannabaceae ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015940Ubiquitin-associated domainSMARTSM00165uba_6coord: 253..290
e-value: 5.5E-10
score: 49.2
IPR015940Ubiquitin-associated domainPFAMPF00627UBAcoord: 254..288
e-value: 5.1E-10
score: 39.0
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 251..291
score: 13.872234
IPR022764Peptidase S54, rhomboid domainPFAMPF01694Rhomboidcoord: 47..185
e-value: 2.1E-6
score: 27.8
NoneNo IPR availableGENE3D1.10.8.10coord: 218..293
e-value: 4.6E-15
score: 57.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..259
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 113..117
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..78
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 185..195
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 79..89
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 118..134
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 196..215
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 216..293
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..112
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 135..154
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 155..184
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..51
NoneNo IPR availableTMHMMTMhelixcoord: 55..77
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableTMHMMTMhelixcoord: 90..112
NoneNo IPR availableTMHMMTMhelixcoord: 117..134
IPR035952Rhomboid-like superfamilyGENE3D1.20.1540.10coord: 11..190
e-value: 3.7E-9
score: 38.4
IPR035952Rhomboid-like superfamilySUPERFAMILY144091Rhomboid-likecoord: 11..187
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 231..291

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000918_piloncontigtig00000918_pilon:142120..143001 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6423.t1Ggra6423.t1Gracilaria gracilis GNS1m malemRNAtig00000918_pilon 142120..143001 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6423.t1 ID=Ggra6423.t1|Name=Ggra6423.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=294bp
MLNQGGLPGFYNAPITKVVIVSVVLFTVFGSITSSQYRLTLQMTDVVQRL
QIWRLLSHNLVFTTPGELIFGTILLYYFRQLERQLGSSRFASFAIISAVF
YTAILASLQLIWSSVHSASGPYSLILACLVFFYFETPKLYRFEVLGALEL
SDKTFVYLIATQLLLLSSPRSLLSCAASILAGIIYRIPIIRENADMPVVI
ISLCSRYVLPLLGTTRHSSSRGRSRRHNDPNSANLRRLEAAAVPPRQTTT
HEAETSVGTLVSMGFSEEQATTALQRTDNDLQRATELLLSEGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015940UBA
IPR022764Peptidase_S54_rhomboid_dom
IPR035952Rhomboid-like_sf
IPR009060UBA-like_sf