Ggra6413.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6413.t1
Unique NameGgra6413.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length195
Homology
BLAST of Ggra6413.t1 vs. uniprot
Match: A0A2V3J625 (40S ribosomal protein S10 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J625_9FLOR)

HSP 1 Score: 285 bits (729), Expect = 1.950e-96
Identity = 141/148 (95.27%), Postives = 145/148 (97.97%), Query Frame = 0
Query:   47 MLMPKKNRVAIYSQLFKDGVCVVKKDPMLKEHLEIKDVPNLHVMQTMKSLRSREYVRETFSWQYYYYYLTDEGIEYLRSYLNLPSTVKPTTLNPPPRQPARSALGGRGDRPRRSYGDGGDKKMGPGGDFRPSYREGGGFGRGGPIRSD 194
            ML+PKKNRVAIYSQLFKDGVCVVKKD MLKEHLE+K++PNLHVMQTMKSLRSREYVRETFSWQYYYYYLTDEGIEYLRSYLNLPSTVKPTTLNPPPRQPARSALG RGDRPRRSYGDGGDKKMGPGGDFRPSYREGGGFGRGGPIR D
Sbjct:    1 MLIPKKNRVAIYSQLFKDGVCVVKKDSMLKEHLEMKEIPNLHVMQTMKSLRSREYVRETFSWQYYYYYLTDEGIEYLRSYLNLPSTVKPTTLNPPPRQPARSALG-RGDRPRRSYGDGGDKKMGPGGDFRPSYREGGGFGRGGPIRKD 147          
BLAST of Ggra6413.t1 vs. uniprot
Match: R7Q7A5 (S10_plectin domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7A5_CHOCR)

HSP 1 Score: 240 bits (612), Expect = 1.250e-78
Identity = 124/147 (84.35%), Postives = 133/147 (90.48%), Query Frame = 0
Query:   47 MLMPKKNRVAIYSQLFKDGVCVVKKDPMLKEHLEIKDVPNLHVMQTMKSLRSREYVRETFSWQYYYYYLTDEGIEYLRSYLNLPSTVKPTTLNPPPRQPARSALGGRGDRPRRSYGDGGDKKMGPGGDFRPSYREGGG-FGRGGPIR 192
            MLMPKK+RVAIYSQ+FKDGVCVVKKDPMLK+H EI DV NLHVMQTMKSL+SREYVRETFSWQYYYYYLTDEGIEYLRS+LNLP +VKP+TL PPPRQP RSAL GRGDR R+   DGGDKKMGP GDFRPSYREGGG FGRG P+R
Sbjct:    1 MLMPKKDRVAIYSQIFKDGVCVVKKDPMLKKHAEI-DVKNLHVMQTMKSLKSREYVRETFSWQYYYYYLTDEGIEYLRSFLNLPGSVKPSTLTPPPRQPPRSALAGRGDRSRKY--DGGDKKMGPEGDFRPSYREGGGGFGRGAPLR 144          
BLAST of Ggra6413.t1 vs. uniprot
Match: A0A1X6NMW1 (S10_plectin domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NMW1_PORUM)

HSP 1 Score: 155 bits (392), Expect = 8.440e-45
Identity = 81/144 (56.25%), Postives = 100/144 (69.44%), Query Frame = 0
Query:   47 MLMPKKNRVAIYSQLFKDGVCVVKKDPMLKEHLEIKDVPNLHVMQTMKSLRSREYVRETFSWQYYYYYLTDEGIEYLRSYLNLPSTVKPTTLNPPPRQPARSALGGRG-------DRPRRSYGDGGDKKMGPGGDFRPSYREGG 183
            ML+PKK+R+A+YSQLFKDGV V K+D   K H+++KDVPNL+V++ M+SL+SREYV + FSW YYYY+LTD GIEYLR YLNLP+ + P TL  P R P     G  G                  DKKMGPGG+FRP+YREGG
Sbjct:    1 MLVPKKDRIAVYSQLFKDGVMVAKEDLGAKRHIDLKDVPNLYVVKLMQSLKSREYVTKQFSWCYYYYFLTDSGIEYLRGYLNLPAEIIPATLKKPTRAPGGPMGGPPGAXXXXXXXXXXXXXXXXXDKKMGPGGEFRPAYREGG 144          
BLAST of Ggra6413.t1 vs. uniprot
Match: A0A7S2XYZ3 (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYZ3_9STRA)

HSP 1 Score: 154 bits (388), Expect = 2.290e-44
Identity = 86/143 (60.14%), Postives = 100/143 (69.93%), Query Frame = 0
Query:   47 MLMPKKNRVAIYSQLFKDGVCVVKKDPMLKEHLEIKDVPNLHVMQTMKSLRSREYVRETFSWQYYYYYLTDEGIEYLRSYLNLPSTVKPTTLNPPPRQPARSALGGRGDRPRRSYGDGGDKKMGPGGDFRPSYREGGGFGRGG 189
            M + K NR+A+YS LFK+GV V KKD    +H EI DVPNL VM  MKS +SR  VRETF+WQYYYYYLT+EGIEYLR YL+LP+ V P TL  P  +PAR   G  G+R    +GD G K+MGP GDF P Y   GGFGRGG
Sbjct:    1 MFVTKTNRLAVYSYLFKEGVLVCKKDNFKPKHDEI-DVPNLEVMNLMKSFKSRGLVRETFNWQYYYYYLTNEGIEYLREYLHLPAEVVPATLKKPAPKPARPGPGPGGERGESRFGDKG-KRMGPAGDFNPEYA--GGFGRGG 139          
BLAST of Ggra6413.t1 vs. uniprot
Match: D7G639 (S10_plectin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G639_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 2.950e-44
Identity = 89/157 (56.69%), Postives = 104/157 (66.24%), Query Frame = 0
Query:   47 MLMPKKNRVAIYSQLFKDGVCVVKKDPMLKEHLEIKDVPNLHVMQTMKSLRSREYVRETFSWQYYYYYLTDEGIEYLRSYLNLPSTVKPTTLNPPPRQPARS--ALGGRGDRPRRSYGDGGD----KKMGPGGDFRPS--------YREGGGFGRGG 189
            M + KKNR+A+YS LFK+GV V KKD    +H EI+DVPNL V+  MKS++SR  VRETF+WQY+Y+YLT EGIEYLR YL+LP  + P TL     +PAR   A GG  D  R  YG  GD    KKMGPGGDF P         YR GGGFGRGG
Sbjct:    1 MFILKKNRLAVYSYLFKEGVLVAKKDFFKAKHDEIEDVPNLEVLALMKSMKSRGLVRETFNWQYFYWYLTVEGIEYLREYLHLPEEIVPATLKKSASRPARPGPAPGGDRDGGRGGYGGXGDRFGDKKMGPGGDFNPEFQRGGQDGYRRGGGFGRGG 157          
BLAST of Ggra6413.t1 vs. uniprot
Match: A0A7S2ZAK4 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZAK4_9RHOD)

HSP 1 Score: 147 bits (370), Expect = 1.100e-41
Identity = 81/145 (55.86%), Postives = 98/145 (67.59%), Query Frame = 0
Query:   47 MLMPKKNRVAIYSQLFKDGVCVVKKDPMLKEHLEIKDVPNLHVMQTMKSLRSREYVRETFSWQYYYYYLTDEGIEYLRSYLNLPSTVKPTTLNPPPRQPARSALGGRGDRPRRSYGDG-GDKKMGPGGDFRPSYREGGG--FGRG 188
            ML+PKK RV +Y QLFKDGV V  KD  L  H ++ DVPNLHV++ M+SL+SR YV+E FSWQY+YY+LT++GI+YL+ YLN P  VKP T                G      +G G G+KKMGPGGDFRP YREGGG  FGRG
Sbjct:    1 MLLPKKTRVEVYKQLFKDGVMVAPKDYNLPSHKDV-DVPNLHVLKLMQSLKSRGYVKEVFSWQYFYYFLTEDGIQYLQGYLNYPDNVKPDTTKKQXXXXXXXXXXXXGXX----FGGGFGEKKMGPGGDFRPEYREGGGRGFGRG 140          
BLAST of Ggra6413.t1 vs. uniprot
Match: 40S ribosomal protein S10 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A920E (40S ribosomal protein S10 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A920E)

HSP 1 Score: 140 bits (353), Expect = 4.600e-39
Identity = 84/159 (52.83%), Postives = 104/159 (65.41%), Query Frame = 0
Query:   47 MLMPKKNRVAIYSQLFKDGVCVVKKDPMLKEHLEIKDVPNLHVMQTMKSLRSREYVRETFSWQYYYYYLTDEGIEYLRSYLNLPSTVKPTTLNPPPRQPARSAL----------GGRG----DRPRRSYGD-GGDKKMGPGGDFRPSYREGGGFGRGGP 190
            ML+PKKNR+AIY  LFK+GVCV KKD    +H +I++VPNLHV ++MKSL+SR YV E FSW+YYY+YLT+EGI YLR YL+LP  + P+TL    RQ  R+            G RG    DR     G  GGD K G G DF+P +R  GG+GRG P
Sbjct:    1 MLIPKKNRIAIYEYLFKEGVCVAKKDRNNPKHKDIENVPNLHVTESMKSLKSRGYVTEQFSWKYYYWYLTNEGITYLRDYLHLPPEIVPSTLR---RQTTRAETARPRPKGMDSGPRGPDSSDRDTYRRGPPGGDPKGGAGTDFKPEFR--GGYGRGRP 154          
BLAST of Ggra6413.t1 vs. uniprot
Match: A0A835YL06 (Plectin/S10 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL06_9STRA)

HSP 1 Score: 139 bits (351), Expect = 6.060e-39
Identity = 80/151 (52.98%), Postives = 98/151 (64.90%), Query Frame = 0
Query:   47 MLMPKKNRVAIYSQLFKDGVCVVKKDPMLKEHLEIKDVPNLHVMQTMKSLRSREYVRETFSWQYYYYYLTDEGIEYLRSYLNLPSTVKPTTLNPPPRQPARSALGGRGDRPRRSYGDG-GDKKMGPGGDFRPSYREG-------GGFGRGG 189
            M + KKNR+ +Y  LF++GV V KKD     H +I DVPNL V+  MKS+RSR+ VRETF+WQ+YYYYLT  GIEYLR YL+LP    P TL  P  +PAR+     G  P  S G   GDKKMGPGGDF+P +++         GFGRGG
Sbjct:    1 MFILKKNRILVYQYLFQEGVLVAKKDFYQPAHEDIPDVPNLEVLCLMKSMRSRQLVRETFNWQHYYYYLTAAGIEYLREYLHLPEETIPATLKKPAARPARA-----GPVPGESAGGRYGDKKMGPGGDFQPEFQQSRDDGYRRSGFGRGG 146          
BLAST of Ggra6413.t1 vs. uniprot
Match: A0A250X7M3 (S10_plectin domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X7M3_9CHLO)

HSP 1 Score: 138 bits (348), Expect = 2.540e-38
Identity = 75/143 (52.45%), Postives = 97/143 (67.83%), Query Frame = 0
Query:   47 MLMPKKNRVAIYSQLFKDGVCVVKKDPMLKEHLEIKDVPNLHVMQTMKSLRSREYVRETFSWQYYYYYLTDEGIEYLRSYLNLPSTVKPTTLNPPPRQPARSALGGRGDRPRRSYGDGGDKKMGPGGDFRPSYREGGGFGRGG 189
            ML+PKKNR  +Y  LFK+GV   +KD  L++H EIK+VPNL V++ M+S +S+E V E +SW+YYY++LTD+GIEYLR YLNLPS + P TL    R   R+    R DRP R Y DG  ++      +R   REGGGFGRGG
Sbjct:    1 MLIPKKNRREVYKYLFKEGVLYAEKDFNLEQHPEIKEVPNLQVLKLMQSFKSQELVTERYSWRYYYWFLTDKGIEYLREYLNLPSEIVPATLKKSTRPLERTTGPQRPDRPPRRYEDGQGREG-----YRSGPREGGGFGRGG 138          
BLAST of Ggra6413.t1 vs. uniprot
Match: A0A024TKD5 (S10_plectin domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TKD5_9STRA)

HSP 1 Score: 137 bits (346), Expect = 2.880e-38
Identity = 72/134 (53.73%), Postives = 93/134 (69.40%), Query Frame = 0
Query:   47 MLMPKKNRVAIYSQLFKDGVCVVKKDPMLKEHLEIKDVPNLHVMQTMKSLRSREYVRETFSWQYYYYYLTDEGIEYLRSYLNLPSTVKPTTLNPPPRQPARSALGGRGDRPRRSYGDGGDKKMGPGGDFRPSYR 180
            ML+PKKNR+A+YS LFK+GV V KKD    +H ++ DVPNL V++ M+SL SR YV+ETF+WQ+YY+YLT EGIEYLR+YL+LP+ + P TL     +P R      G      YG G DK +GP GDF P +R
Sbjct:    1 MLVPKKNRIAVYSYLFKEGVMVGKKDFFAPKHGDV-DVPNLQVIKLMQSLHSRGYVKETFNWQWYYWYLTAEGIEYLRAYLHLPTEIVPATLKKQAARPQRPQAPSAG-----GYGRGKDKNLGPSGDFNPEFR 128          
The following BLAST results are available for this feature:
BLAST of Ggra6413.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J6251.950e-9695.2740S ribosomal protein S10 n=1 Tax=Gracilariopsis c... [more]
R7Q7A51.250e-7884.35S10_plectin domain-containing protein n=1 Tax=Chon... [more]
A0A1X6NMW18.440e-4556.25S10_plectin domain-containing protein n=1 Tax=Porp... [more]
A0A7S2XYZ32.290e-4460.14Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D7G6392.950e-4456.69S10_plectin domain-containing protein n=2 Tax=Ecto... [more]
A0A7S2ZAK41.100e-4155.86Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
40S ribosomal protein S10 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A920E4.600e-3952.8340S ribosomal protein S10 n=1 Tax=Exaiptasia diaph... [more]
A0A835YL066.060e-3952.98Plectin/S10 domain-containing protein n=1 Tax=Trib... [more]
A0A250X7M32.540e-3852.45S10_plectin domain-containing protein n=1 Tax=Chla... [more]
A0A024TKD52.880e-3853.73S10_plectin domain-containing protein n=3 Tax=Apha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005326Plectin/S10, N-terminalPFAMPF03501S10_plectincoord: 49..139
e-value: 7.3E-40
score: 134.9
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 47..150
e-value: 3.4E-42
score: 144.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..194
IPR03744740S Ribosomal protein S10PANTHERPTHR1214640S RIBOSOMAL PROTEIN S10coord: 47..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000918_piloncontigtig00000918_pilon:113286..113870 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6413.t1Ggra6413.t1Gracilaria gracilis GNS1m malemRNAtig00000918_pilon 113286..113870 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6413.t1 ID=Ggra6413.t1|Name=Ggra6413.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=195bp
MRVRRGRRRRARSSEEARPRYDDAVARSEQLRSSIRFHRAAPPFVTMLMP
KKNRVAIYSQLFKDGVCVVKKDPMLKEHLEIKDVPNLHVMQTMKSLRSRE
YVRETFSWQYYYYYLTDEGIEYLRSYLNLPSTVKPTTLNPPPRQPARSAL
GGRGDRPRRSYGDGGDKKMGPGGDFRPSYREGGGFGRGGPIRSD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005326S10_plectin_N
IPR036388WH-like_DNA-bd_sf
IPR037447Rps10