Ggra6404.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6404.t1
Unique NameGgra6404.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length313
Homology
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BLAST of Ggra6404.t1 vs. uniprot
Match: A0A0G4HWJ0 (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HWJ0_9ALVE)

HSP 1 Score: 62.4 bits (150), Expect = 2.530e-7
Identity = 53/197 (26.90%), Postives = 93/197 (47.21%), Query Frame = 0 
Query:   67 NNKLNDIEDLTVDGMKLYAQATCVKGPTITHVRNALSAQLRQ--IPQQAREDIIES-AVVEGMDTVS-TRQDTSADPGESGTAFSYLAYWNTKF------NGNQVLVSDRYSTCIMAAGVDVKIGEDLAGYEESSRKVRIGTR--PCEC-------GMLWCVGRC--PEYETVTTKRPVFKRHRLTLRDQGKLHRWM 242
            +  L+ +  L +   +  + A CV       +++A+  +L+   +P    + + E  A  +G    S T  +++ D   +G A  Y A+++T F       G        + +C+  + ++V + E+LA +EE + KV+ GTR  PC+C       G     G C  PE  T T ++PVFKRH L++ D   L + M
Sbjct:  155 SQSLHRVRQLPIYQKRFASGAFCVSNIRSGGLQDAVRKRLKAKGLPTDVADLLAEQVAANDGEQEASDTFVNSTVDSVSNGKAHHYRAFYSTVFAKGMPTEGTHREPVGTWVSCVGVSSIEVMLDEELAAWEEYTVKVKRGTRKFPCQCITIRGWFGSEVKCGTCEEPELATETLRKPVFKRHALSVEDAFTLQQLM 351
The following BLAST results are available for this feature:
BLAST of Ggra6404.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A0G4HWJ02.530e-726.90Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 279..312
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..40
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 41..312
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000918_piloncontigtig00000918_pilon:82598..83536 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6404.t1Ggra6404.t1Gracilaria gracilis GNS1m malemRNAtig00000918_pilon 82598..83536 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6404.t1 ID=Ggra6404.t1|Name=Ggra6404.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=313bp
MVHPSSSRSDVTSEQLGNPLVRTFIRLLMLFGIVLPLAMYCTHHIQRMRL
EEPLQQLRAFARREAANNKLNDIEDLTVDGMKLYAQATCVKGPTITHVRN
ALSAQLRQIPQQAREDIIESAVVEGMDTVSTRQDTSADPGESGTAFSYLA
YWNTKFNGNQVLVSDRYSTCIMAAGVDVKIGEDLAGYEESSRKVRIGTRP
CECGMLWCVGRCPEYETVTTKRPVFKRHRLTLRDQGKLHRWMVKQAVKRA
ESLVLSREQLDSNSGISYSIEDGMPSASWKAPDEDYFSGDDNFADVSKSR
PNPDQKHPKQDL*
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