Ggra6396.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6396.t1
Unique NameGgra6396.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length177
Homology
[Close]
BLAST of Ggra6396.t1 vs. uniprot
Match: A0A2V3IBR7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBR7_9FLOR)

HSP 1 Score: 147 bits (372), Expect = 1.100e-40
Identity = 64/77 (83.12%), Postives = 69/77 (89.61%), Query Frame = 0 
Query:   98 WDYESKYSGQCDEFVWRNPPPRYLGSGVNVHGNRWTTLKGGGYHYANHGTDGGFYIRNSDGSSYHFSPRRGGRYTPA 174
            WDYES Y GQCDE+VWRNPPPR LGSG+N +GNRWT L+GGGYHYANHGTDGGFYIRNSDGSSYHFSP RGG + PA
Sbjct:  214 WDYESTYYGQCDEYVWRNPPPRNLGSGMNGYGNRWTNLRGGGYHYANHGTDGGFYIRNSDGSSYHFSPSRGGSFRPA 290
The following BLAST results are available for this feature:
BLAST of Ggra6396.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IBR71.100e-4083.12Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000861_piloncontigtig00000861_pilon:180757..181287 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6396.t1Ggra6396.t1Gracilaria gracilis GNS1m malemRNAtig00000861_pilon 180757..181287 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6396.t1 ID=Ggra6396.t1|Name=Ggra6396.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=177bp
MNYISSTTKQEPKPRERSTPAAQEHHVSSTVGDQEERRKKNKLEASSDDA
TNFVSISAIGTGPRFGKREEQWYETVLKTLTEQFSKLKLAGGNALKIWDY
ESKYSGQCDEFVWRNPPPRYLGSGVNVHGNRWTTLKGGGYHYANHGTDGG
FYIRNSDGSSYHFSPRRGGRYTPARR*
back to top