Ggra638.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra638.t1 vs. uniprot
Match: A0A2V3IUT9 (Small subunit processome component 20-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUT9_9FLOR) HSP 1 Score: 494 bits (1272), Expect = 2.250e-153 Identity = 264/451 (58.54%), Postives = 332/451 (73.61%), Query Frame = 0
Query: 1 LSYELADGRLVALNAIHAVLNKFPGDVLKRESEYLIVALASMVSLDTDADCRSNASQCLQLLFEKVPYGRKVFDLLKMAVTLSGMVLSSETGSRVIETDGTLDPVIQRSGAVSLTAACMSGRLSADQLSLVVRTAAAVLPGLSGENQWEAIHSFLLCLEEAFAKSSLKGRKSLEVQPYVFPVWKVLPLFLLSNHQWVRLSAARLLRRHLSSAGGRTLAIKDMPVSSLIWYSNDLVRELLRSSCLQLEANILCPALAKETLENLLSMAVVLQSNPRIGDLRLHSV-NRSRNPQDSSSDVENDLQEGRALNWLIARISGIASKGKLESSDMLRRGCALSFRLVSTKRWDRDKICRHARQYINPVVKILESGEIQFLAPDSSETKEPVPHKPEECGPDGNDTNSDGITGVGLRMLAQTLQESLTEVLGTSEYFEVYNQLRSLRAEIKQTRKRNA 450
LSY+L +GRL ALNAI+ V+NKFP VL++E EYL VALASMVS D D+ CRS ASQCL+LLFEK+P GRKV DLL+MAV LSG+ LS V +DPVIQRSGA S+TAACMSG LS +Q+++VVR AA +LPGLS WE H+FL+C+EEAF +S+L K +E+Q +V P+WK LP FLLS HQWVRLSAARLLRRHLSSAGGR + I+D +W S+DLVRE+LRS LQLEANIL P LA++ L N++ MA VL+ NP++GDLR + + S + ++D EGRAL WLIAR+SGIA KG+ ESSD+LRRGCAL F +V++K WD I RH RQYIN VVK+LESG+I+ + + ++ P + ++ P + G+TG GL++LAQTLQESLTEVLGT+EY++VYNQLRS R E+KQ RKR A
Sbjct: 2380 LSYKLPEGRLGALNAINMVVNKFPVPVLEKECEYLFVALASMVSRDADSQCRSEASQCLRLLFEKLPAGRKVADLLRMAVALSGLKLSDGPSLEVHIKVEDVDPVIQRSGASSMTAACMSGNLSDEQITIVVRAAATLLPGLSNVPGWETAHAFLVCVEEAFERSALTANKQMELQKFVLPLWKSLPSFLLSKHQWVRLSAARLLRRHLSSAGGRHVDIQDPMSPYTVWSSDDLVREILRSCSLQLEANILSPELARQVLNNIMCMADVLKRNPQVGDLRTRDAESETLQTHVSPCEEDSDRTEGRALTWLIARMSGIAMKGRFESSDVLRRGCALRFLIVTSKWWDPPVIKRHERQYINAVVKVLESGDIRAASGEVADVSIPSSNPIKKTDPVESTAEESGLTGQGLQLLAQTLQESLTEVLGTAEYYKVYNQLRSKREEVKQERKRKA 2830
BLAST of Ggra638.t1 vs. uniprot
Match: R7QKY0 (DRIM domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKY0_CHOCR) HSP 1 Score: 305 bits (781), Expect = 8.680e-88 Identity = 185/474 (39.03%), Postives = 265/474 (55.91%), Query Frame = 0
Query: 1 LSYELADGRLVALNAIHAVLNKFPGDVLKRESEYLIVALASMVSLDTDADCRSNASQCLQLLFEKVPYGRKVFDLLKMAVTLSGMVLSSETGSRVIETDGTLDPVIQRSGAVSLTAACMSGRLSADQLSLVVRTAAAVLPGLSGENQWEAIHSFLLCLEEAF-AKSSLKGRKSLEVQPYVFPVWKVLPLFLLSNHQWVRLSAARLLRRHLSSAGGRTLAIKDMPVS--SLIWYSNDLVRELLRSSCLQLEANILCPALAKETLENLLSMAVVLQSNPRIGDLRLHSVNRSRNPQDSSSDVENDLQEG-----------RALNWLIARISGIASKGKLESSDMLRRGCALSFRLVSTKRWDRDKICRHARQYINPVVKILESGEIQFLAPDSSETKEPVPHKPEECGPDGNDTNSDGITGVGLRMLAQTLQESLTEVLGTSEYFEVYNQLRSLRAEIKQTRKRNAALLAAVDPER 460
L+YEL GRL AL I ++ KFP D L ES+YL VALA+ + D+D DCRS AS+ LQLLFEK GR ++ LL+M+ L+G+ IE T++ +Q SGAV+L+ AC S R+++ QL+++VR VL GE +WE ++ L LE AF + + + LEVQ + +W LPL L+ H WVRLS+ARLL HLS G A + P SL+W S+ VR +L C QLEA+ + +L + L+N+L +A VL NP IGDL +R P+ D++ + Q L+WL+ R+SG+A++ E++D LRRGCA+ F V K W D + + + +I P+VK+LE ++ + E + E G DG L+ +A TLQE+L EVLG Y+ +Y LR+ R E+K+ RKR AA A++PER
Sbjct: 2389 LNYELPTGRLAALQVIRTLILKFPSDALTDESQYLFVALAASAARDSDGDCRSCASEALQLLFEKASSGRGIYSLLQMSTALAGVKSDMIAIDDHIEVITTIEDDVQLSGAVALSRACKSRRMTSSQLNMIVRVVTVVLTDRLGEGKWETVYGLLDALESAFDVQETAVQSERLEVQQHTLKLWDSLPLLLIHKHPWVRLSSARLLGSHLSVHGDNKRAAEKRPAVPFSLLWESSTNVRNILNCCCAQLEASSISESLVHQCLKNILCIANVLFHNPAIGDL-------AREPRAGKRDIQQENQNAVIVPTSLKTRNPGLHWLVCRVSGLATRPGTEAADSLRRGCAMRFLHVIAKWWGVDFVLPNQKLFIAPIVKVLEHKAPTTVSQVGNRGYESLVASQENIGMDG------------LKEIAGTLQEALVEVLGGGAYYSMYKLLRNERNEVKEARKRQAAFELAINPER 2843
BLAST of Ggra638.t1 vs. uniprot
Match: A0A1Y1HR11 (Down-regulated in metastasis family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HR11_KLENI) HSP 1 Score: 72.4 bits (176), Expect = 1.430e-9 Identity = 117/504 (23.21%), Postives = 189/504 (37.50%), Query Frame = 0
Query: 1 LSYELADGRLVALNAIHAVLNKFPGDVLKRESEYLIVALASMVSLDTDADCRSNASQCLQLLFEKVP--------------YGRKVFDLLKMAVTLSGMVLSSETGSRVIETDGTLDPVIQRSGAVSLTAACMSGRLSADQLSLVVRTAAAVLPGLSGEN------QWEAIHSFLLCLEEAFAKSSLKGRKSLEVQPYVFPVWKVLPLFLLSNHQWVRLSAARLLRRHLSSAGGRTLAIKDMPVSSLIWYSNDLV------RELLRSSCLQLEANILCPALAKETLENLL----SMAVVLQSNPRIGDLRLHSVNRSRNPQDSSSD-VENDLQEGRALNWLIARISGIASKGKLESSDMLRRGCALSFRLVSTKRWDRDK------ICRHARQYINPVVKILESGEIQFLAPDSSETKEPV--PHKPEECGP-----DGNDTNSDGITGVGLRMLAQTLQESLTEVLGTSEYFEVYNQLRSLRAEIKQTRKRNAALLAAVDPER 460
L+YE GR AL IHAVL KFP +++ ++ + L + + D CR+ L++L +V YG + +L + A + G + L P +R A AA L Q +L AA G ++ W+ + L E+ F K L Q F W+ + LL H WVR +A RL+ GG A+ W ++ + + S C QLEA ++ LA++ ++NL+ +M VL++ + G VN + +S N L +G A S + RW RD+ + R + V I + +++ A ++ PH PE P +GN + L+ LA+ + + + +G S++ YN +R ++ RKR AA+ A VDPER
Sbjct: 2653 LAYEHPSGREAALEMIHAVLVKFPPEIVDENGDFFFLPLVTRLVNDDKQQCRAMVGAVLKVLMGRVGSAARQRMIDFAMAWYGGERRELWRPAAQVLGFGVE------------VLGPAFKRHVAAWRAAAL--AMLDRCQNALEGSPEAAAEEGSPSDDGQPAAPMWQEAYFTLTSAEKLFQKLP---ELVLSAQFQAF--WEHVSAHLLHRHLWVRKAAGRLV-------GGLFAALPQPTREPPGWAGETILSPPEGLQRVAASLCQQLEAEVVDEKLAEQGVKNLVYVATAMHAVLEAGVKPG------VNGANGRLESEGKHAGNGLGDGLAXXXXXXXXXXXXXXXXXXSEE---------------GRWQRDRCPTLKSLFRRIARIALRVEPIQSAAALRWFAAVATALGGAAVRPHLPELVVPLYRLAEGNAAKT---VPDDLKALAEEVMGLVRDSVGVSDFVSAYNAVRQDVKVSREDRKRKAAIAALVDPER 3106
BLAST of Ggra638.t1 vs. uniprot
Match: I0YZQ7 (ARM repeat-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZQ7_COCSC) HSP 1 Score: 65.9 bits (159), Expect = 1.570e-7 Identity = 115/496 (23.19%), Postives = 186/496 (37.50%), Query Frame = 0
Query: 1 LSYELADGRLVALNAIHAVLNKFPGDVL---KRESEYLIVALASMVSLDTDADCRSNASQCLQLLFEKVPYGRKVFDLLKMAVTLSGMVLSSETGSRVIETDGTLDPVIQRSGAVSL-TAACMSGRLSADQLSLVVRTAAAVLPGLSGENQ--------------WEAIHSFLLCLEEAFAKSSLKGRKSLEVQPYVFPVWKVLPLFLLSNHQWVRLSAARLLRRHL--SSAGGRTLAIKDMPVSSLIWYSNDLVRELLRSSCLQLEANILCPALAKETLENLLSMAVVLQSN-------PRIG-DLRLHSVNRSRNPQDSSSDVEN---------DLQEGRALNWLIARISGIASKGKLESSDMLRRGCALSFRLVSTKRWDRDKICRHARQYINPVVKILESGEIQFLAPDSSETKEPVPHKPEECGPDGNDTNSDGITGVGLRMLAQTLQESLTEVLGTSEYFEVYNQLRSLRAEIKQTRKRNAALLAAVDPE 459
L +E GR A++A+ AV+ KFP +VL R S + + +A +VS D CR+ + L+ L + + V S + DP + RSGA +L A G ++ +++ + L S E W+ ++ LL LE+ S + + S + V +W LP L H WVR +A+RLL S+ G LA ++ L + +QLEA AL + +NL+ +A L + P G + L SV S P ++ + N D+ + L A++G+ S+ L RL + W R A ++ + L + VP+ P P T S+ ++ LA+ + L V G YN+ R ++++ R+R AL A VDPE
Sbjct: 2445 LEFEHESGREAAIDAMIAVIQKFPEEVLVKKDRASAFFLPLVARLVS-DPSPKCRALVGRALKALLSR-----------------ANPVQLDRFASMCQKWLEGADPRLGRSGAQTLGIMAETEGARFGHRVPILLPQLLSTLQAHSQEESGAVLCTEAENIAQGWQVCYACLLLLEKIVGSSPAQVQWSAGRRE-VRQIWLQLPPLLTHRHLWVRKAASRLLGLAFAESTIGEGLLAEEEAAPGRLAFLL-----------FIQLEAEAADDALLSQATKNLVFLAPRLLATDTAAGRVPAAGKSINLSSVANS-GPAADTAKIGNGAAGGPGGADVADDADLXXXXXXXXXXAAEGEGRSALTLHGLVRRMARLADDRAWPRQAARLAALRFAAALGSRLGKESV-------------VPYLPSVLLPLYRITESNAANSDEVKALAEEVLAHLRTVAGPEALLAAYNRARQHVSDLRSERRRQKALQALVDPE 2896
BLAST of Ggra638.t1 vs. uniprot
Match: A0A830DJE6 (Small subunit processome component 20 homolog n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830DJE6_9LAMI) HSP 1 Score: 61.2 bits (147), Expect = 4.250e-6 Identity = 114/483 (23.60%), Postives = 199/483 (41.20%), Query Frame = 0
Query: 1 LSYELADGRLVALNAIHAVLNKFPGDVLKRESEYLIVALASMVSLDTDADCRSNASQCLQLLFEKVPYGRKVFDLLKMAVT--LSGMVLSSETGSRVIETDGTLDPVIQRSGAVSLTAAC------MSGRLSADQLSLVVRTAAAVLPGLSGENQWEAIHSFLLCLEEAFAKSSLKGRKSLEVQPYVFPVWKVLPLFLLSNHQWVRLSAARLLRRHLSSAGGRTLAIKD--MPVSSLIWYSNDLVRELLRSSCLQLEANILCPALAKETLENLLSMAVVLQS---NPRIGDLRLHSVNRSRNPQDS--SSDVENDLQEGR-ALNWLIARISGIASKGKLESSDMLRRGCALSFRLVSTKRWDRDKICRHARQYINPVVKILES-GEIQFLAPDSSETKEPVPHKP--EECGPDGNDTNSDGITGV----GLRMLAQTLQESLTEVLGTSEYFEVYNQLRSLRAEIKQTRKRNAALLAAVDPER 460
L YE + GR L +HA++ KFP +V+ +S+ L + L ++ D D+ RS A+ ++ L V +L+ +V+ L G ++V+ G L VI +S L +SA S + AV+P W+ + L+ LE+ L ++L + +W+ + FLL H W+R + R+L R+ ++A T A ++ + + +L ++ S C QL+ + A L+NL+ L S D+ N R QD + + D +GR L L + ++S E L + +S + KI + + I+P K+L GEI + + + P C +G TG L+ LAQ + ES+ ++G + +VY+Q+R + RK+ ++A V+P R
Sbjct: 2298 LRYEHSTGREAVLEMLHAIILKFPRNVVDGQSQTLFLHLVISLANDDDSKVRSMAAAAIKCLIGHVS-SYSHHSVLEYSVSWYLGGKQNLWGAAAQVL---GLLVEVIGKSFEKHLNKVLPVMRRVFQSAVSAVTSSQENASEEAVVPF------WKEAYYSLVLLEKI-----LNQFQNLFFDSDLEDIWETICEFLLHPHLWIRNISNRILSRYFAAA---TDAYRENKLSIETLFLMKPSILFHTAVSLCCQLKVPLTDDAAGPIILQNLVFSICGLNSYLEKDECMDVSKFWANLDRAEQDRFLKAFLVVDPSKGRRTLTSLTCDANTLSSACLFEVRTFLSVESPTAPGSLSLVLREIMKIVFNCFKLISP--KLLRCYGEISPIGNNDQHSYAYPMLLPLYRVC---------EGYTGTVVSDDLKQLAQEVSESIRGIIGVQNFVQVYSQIRKNLKLKRDKRKQGEKIMAVVNPVR 2751
BLAST of Ggra638.t1 vs. uniprot
Match: small subunit processome component 20 homolog n=1 Tax=Sesamum indicum TaxID=4182 RepID=UPI0009D71D9C (small subunit processome component 20 homolog n=1 Tax=Sesamum indicum TaxID=4182 RepID=UPI0009D71D9C) HSP 1 Score: 60.8 bits (146), Expect = 5.570e-6 Identity = 108/496 (21.77%), Postives = 201/496 (40.52%), Query Frame = 0
Query: 1 LSYELADGRLVALNAIHAVLNKFPGDVLKRESEYLIVALASMVSLDTDADCRSNASQCLQLLFEKVPYGRKVFDLLKMAVT--LSGMVLSSETGSRVIETDGTLDPVIQRSGAVSLTAACMSGRLSADQLSLVVRTAAAVLPGLSGENQWEAIHSFLLCLEEAFAKSSLKGRKSLEVQPYVFP-----VWKVLPLFLLSNHQWVRLSAARLLRRHLSSAGGRTLAIKDMPVSSLIWYSNDLVRELLRSSCLQLEANILCPALAKETLENLLSMAVVLQSNPRIGDLRLHSVNRSRNPQDSSSDVENDLQEGRALNWLIARISGIASKGKLESSDMLRRGCALSFRLVSTKRWDRDKICRHARQYINPVVKIL--ESGEIQFLAPDSS-----ETKEPVPHKPEEC----GPDGNDTNS--------------DGITGV----GLRMLAQTLQESLTEVLGTSEYFEVYNQLRSLRAEIKQTRKRNAALLAAVDPER 460
L YE GR L +HA++ KFP +++ +S+ + V L ++ D D+ RS + ++ L V + +L+ +++ L G + S + G L V+++S +L L ++++A + + + + EA+ F +EA+ L + + F +W+ + FLL H W+R + R+L + ++ T A +D VS ++ L++ S L L A LC L + +++ + V++ N LHS+ D N L+ G +L A + KGK+ + + D +H Q+ +P + L G+I F D+ + + K C P G+D +G TG L+ LAQ + ES+ +++G + +VY+Q+R + RK+ ++A V+P R
Sbjct: 2187 LRYEHPTGREATLEMLHAIILKFPRNIIDAQSQTMFVHLVVSLANDDDSKVRSMTAAAIKCLIGHVN-SHSLHSILEYSLSWYLGG---NQNLWSAAAQVLGLLVEVMRKSFEKNLDRVL-------PVLRNILQSALSAVTSIQQNSSDEAVAPFW---KEAYYSLVLLEKLLCQFHILFFDRELEDIWETICEFLLHPHLWLRNISNRILSVYFAAV---TTACRDKKVSMGTFF-------LMKPSILFLAAVSLCCQLKVQLIDD--AAGVIIMQNLVFSICGLHSLLVEVEFMDVPKFWSN-LERGEQERFLKAFGALDPRKGKMILAS-----------------FTSDASGQH-NQHQHPFISYLLQRMGKITFQMDDNQIKIVFNCFKSISPKLLGCYGISSPIGDDDLHNYAYLLLLPLYRVVEGYTGKVVSDDLKQLAQEVSESIRDIIGMQNFVQVYSQIRKNLKGKRDKRKQQEKIMAVVNPTR 2637 The following BLAST results are available for this feature:
BLAST of Ggra638.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 6
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra638.t1 ID=Ggra638.t1|Name=Ggra638.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=504bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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