Ggra6344.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6344.t1
Unique NameGgra6344.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length89
Homology
BLAST of Ggra6344.t1 vs. uniprot
Match: A0A2V3INX9 (Alkyl transferase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INX9_9FLOR)

HSP 1 Score: 104 bits (260), Expect = 1.640e-25
Identity = 47/85 (55.29%), Postives = 63/85 (74.12%), Query Frame = 0
Query:    3 SHEGHAIGRKTLVQVLQWCLKAGVETVTVYAWSLENFKHPNVEVAEIMRLALEAAKDFKHKKHFVHKNRVQIRFLGDLKRVPKQL 87
            S  GH +G++  + VL WCL+AGV+TVTVYAWSLENFK  + EV EIM++  E A+    + H +H NRV++RFLGDL+RVP +L
Sbjct:   15 SGSGHRMGKRRFIDVLDWCLQAGVKTVTVYAWSLENFKRSSAEVNEIMKIGQEEAERMWEEVHIIHSNRVRVRFLGDLQRVPTKL 99          
BLAST of Ggra6344.t1 vs. uniprot
Match: A0A7S3EQR5 (Alkyl transferase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EQR5_9RHOD)

HSP 1 Score: 83.6 bits (205), Expect = 3.040e-17
Identity = 40/87 (45.98%), Postives = 55/87 (63.22%), Query Frame = 0
Query:    1 MSSHEGHAIGRKTLVQVLQWCLKAGVETVTVYAWSLENFKHPNVEVAEIMRLALEAAKDFKHKKHFVHKNRVQIRFLGDLKRVPKQL 87
            M+  +GH  G KT+V  L WC  A + T+TVYA+S+ENFK P  EV  IM LA++  +D       VHK R+++RF G++  VPK L
Sbjct:   58 MAFRDGHRRGGKTMVDFLTWCRDADISTITVYAFSIENFKRPKGEVDYIMDLAIQNVEDMLQPWSAVHKERIRVRFWGEMDMVPKTL 144          
BLAST of Ggra6344.t1 vs. uniprot
Match: L8H007 (Alkyl transferase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H007_ACACA)

HSP 1 Score: 82.8 bits (203), Expect = 7.160e-17
Identity = 39/83 (46.99%), Postives = 56/83 (67.47%), Query Frame = 0
Query:    6 GHAIGRKTLVQVLQWCLKAGVETVTVYAWSLENFKHPNVEVAEIMRLALEAAKDFKHKKHFVHKNRVQIRFLGDLKRVPKQLE 88
            GH +G   L + L+WCL+ GVE VTVYA+S+ENFK    EV+ +MRLA E  ++  +++  +HK+ V IR LGD+  VP  L+
Sbjct:   69 GHTMGFNKLKEALEWCLELGVEVVTVYAFSMENFKRSPEEVSALMRLAAEKFEELLNQEDIIHKHGVSIRVLGDISLVPDYLQ 151          
BLAST of Ggra6344.t1 vs. uniprot
Match: A0A0A9X4L5 (Alkyl transferase (Fragment) n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9X4L5_LYGHE)

HSP 1 Score: 81.3 bits (199), Expect = 1.050e-16
Identity = 35/83 (42.17%), Postives = 58/83 (69.88%), Query Frame = 0
Query:    6 GHAIGRKTLVQVLQWCLKAGVETVTVYAWSLENFKHPNVEVAEIMRLALEAAKDFKHKKHFVHKNRVQIRFLGDLKRVPKQLE 88
            GH++G  TL+ +L+ CL+ GV TVTV+A+SL+NFK    E+  ++ LA     +  H++HF+ + + Q+RFLGD+ R+P +L+
Sbjct:   52 GHSLGYTTLLHILEICLQLGVRTVTVFAFSLDNFKRSKNEIDSLIDLAETKLSELAHRRHFLVETQTQVRFLGDISRLPTELQ 134          
BLAST of Ggra6344.t1 vs. uniprot
Match: A0A1R2BPJ2 (Alkyl transferase n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BPJ2_9CILI)

HSP 1 Score: 79.0 bits (193), Expect = 6.210e-16
Identity = 39/84 (46.43%), Postives = 55/84 (65.48%), Query Frame = 0
Query:    1 MSSHEGHAIGRKTLVQVLQWCLKAGVETVTVYAWSLENFKHPNVEVAEIMRLALEAAKDFKHKKHFVHKNRVQIRFLGDLKRVP 84
            M   +GH+ G + L++VL+WCL+ G+  VTVYA+S +NFK P+ EV E+MRL L A +    KK  V    V+IR +GDL+  P
Sbjct:   38 MKKFQGHSYGLEKLLEVLEWCLELGIGIVTVYAFSTDNFKRPDEEVNELMRLFLVACEKLSAKKSEVIAKGVKIRIIGDLEGFP 121          
BLAST of Ggra6344.t1 vs. uniprot
Match: A0A2R5GSQ6 (Alkyl transferase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GSQ6_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.160e-15
Identity = 37/83 (44.58%), Postives = 52/83 (62.65%), Query Frame = 0
Query:    5 EGHAIGRKTLVQVLQWCLKAGVETVTVYAWSLENFKHPNVEVAEIMRLALEAAKDFKHKKHFVHKNRVQIRFLGDLKRVPKQL 87
            +GH  G  TL++VL+WC+K GV  VTVYA+S++NFK    EVA +M LA E   +F      V +N +++  LGDL  +P  L
Sbjct:   52 QGHIFGYTTLLRVLEWCMKLGVTEVTVYAFSIDNFKRSEEEVATLMNLAKEKFAEFLKHTELVMQNEIRVNVLGDLSLLPSDL 134          
BLAST of Ggra6344.t1 vs. uniprot
Match: A0A842M7V4 (Di-trans,poly-cis-decaprenylcistransferase (Fragment) n=1 Tax=Methanobacteriaceae archaeon TaxID=2099680 RepID=A0A842M7V4_9EURY)

HSP 1 Score: 76.3 bits (186), Expect = 1.870e-15
Identity = 39/84 (46.43%), Postives = 55/84 (65.48%), Query Frame = 0
Query:    5 EGHAIGRKTLVQVLQWCLKAGVETVTVYAWSLENFKHPNVEVAEIMRLALEAAKDFKHKKHFVHKNRVQIRFLGDLKRVPKQLE 88
            +GH  G KTL +VL WC+  G+E VTVYA+S ENFK P  EV  +MRL  E  K     +  +HKNRV+I+ +G+L  +P+ ++
Sbjct:   49 QGHKKGIKTLEKVLDWCIDLGIEIVTVYAFSTENFKRPKNEVEGLMRLFEENFKKVAENEK-IHKNRVKIKAVGNLDLLPENMK 131          
BLAST of Ggra6344.t1 vs. uniprot
Match: A0A6U1H2M0 (Alkyl transferase n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A6U1H2M0_9CHLO)

HSP 1 Score: 78.2 bits (191), Expect = 2.090e-15
Identity = 31/84 (36.90%), Postives = 56/84 (66.67%), Query Frame = 0
Query:    5 EGHAIGRKTLVQVLQWCLKAGVETVTVYAWSLENFKHPNVEVAEIMRLALEAAKDFKHKKHFVHKNRVQIRFLGDLKRVPKQLE 88
            +GH  G  TLV  L+WCL  G+  VTVYA+S++NF+ P  EV ++M LA +  ++   ++  +H++ +Q+R +G+L+ +P  ++
Sbjct:   71 QGHRAGYATLVDALEWCLDLGINYVTVYAFSVDNFRRPKSEVGDLMSLASDKLEELMQEREIIHRHGIQVRVIGELQLLPLSVQ 154          
BLAST of Ggra6344.t1 vs. uniprot
Match: A0A7S0BQ02 (Alkyl transferase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BQ02_9RHOD)

HSP 1 Score: 78.2 bits (191), Expect = 3.040e-15
Identity = 36/87 (41.38%), Postives = 57/87 (65.52%), Query Frame = 0
Query:    1 MSSHEGHAIGRKTLVQVLQWCLKAGVETVTVYAWSLENFKHPNVEVAEIMRLALEAAKDFKHKKHFVHKNRVQIRFLGDLKRVPKQL 87
            M+  +GH  G +T+++ L+W  +A + T+TVYA+S+ENFK P  EV  IM LA++  +D       VHK R+++RF G++  VP+ L
Sbjct:   58 MALRDGHTRGGQTMIEFLKWHREADISTITVYAFSIENFKRPKDEVDYIMDLAIQNVEDMLQPGSAVHKERLRVRFWGEMDMVPRTL 144          
BLAST of Ggra6344.t1 vs. uniprot
Match: A0A0A9VZR8 (Ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyldiphosphate specific) (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9VZR8_LYGHE)

HSP 1 Score: 75.1 bits (183), Expect = 3.310e-15
Identity = 33/77 (42.86%), Postives = 53/77 (68.83%), Query Frame = 0
Query:    6 GHAIGRKTLVQVLQWCLKAGVETVTVYAWSLENFKHPNVEVAEIMRLALEAAKDFKHKKHFVHKNRVQIRFLGDLKR 82
            GH++G  TL+ +L+ CL+ GV TVTV+A+SL+NFK    E+  ++ LA     +  H++HF+ + + Q+RFLGD+ R
Sbjct:   52 GHSLGYTTLLHILEICLQLGVRTVTVFAFSLDNFKRSKNEIDSLIDLAETKLSELAHRRHFLVETQTQVRFLGDISR 128          
The following BLAST results are available for this feature:
BLAST of Ggra6344.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INX91.640e-2555.29Alkyl transferase n=1 Tax=Gracilariopsis chorda Ta... [more]
A0A7S3EQR53.040e-1745.98Alkyl transferase n=1 Tax=Rhodosorus marinus TaxID... [more]
L8H0077.160e-1746.99Alkyl transferase n=1 Tax=Acanthamoeba castellanii... [more]
A0A0A9X4L51.050e-1642.17Alkyl transferase (Fragment) n=2 Tax=Lygus hesperu... [more]
A0A1R2BPJ26.210e-1646.43Alkyl transferase n=1 Tax=Stentor coeruleus TaxID=... [more]
A0A2R5GSQ61.160e-1544.58Alkyl transferase n=1 Tax=Hondaea fermentalgiana T... [more]
A0A842M7V41.870e-1546.43Di-trans,poly-cis-decaprenylcistransferase (Fragme... [more]
A0A6U1H2M02.090e-1536.90Alkyl transferase n=1 Tax=Tetraselmis chuii TaxID=... [more]
A0A7S0BQ023.040e-1541.38Alkyl transferase n=1 Tax=Rhodosorus marinus TaxID... [more]
A0A0A9VZR83.310e-1542.86Ditrans,polycis-polyprenyl diphosphate synthase ((... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001441Decaprenyl diphosphate synthase-likePFAMPF01255Prenyltransfcoord: 3..87
e-value: 6.7E-21
score: 74.8
IPR001441Decaprenyl diphosphate synthase-likePANTHERPTHR10291DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE FAMILY MEMBERcoord: 3..87
IPR036424Decaprenyl diphosphate synthase-like superfamilyGENE3D3.40.1180.10coord: 1..88
e-value: 6.5E-24
score: 86.2
IPR036424Decaprenyl diphosphate synthase-like superfamilySUPERFAMILY64005Undecaprenyl diphosphate synthasecoord: 3..87
NoneNo IPR availablePANTHERPTHR10291:SF0DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE COMPLEX SUBUNIT DHDDScoord: 3..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000096_piloncontigtig00000096_pilon:284346..284612 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6344.t1Ggra6344.t1Gracilaria gracilis GNS1m malemRNAtig00000096_pilon 284346..284612 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6344.t1 ID=Ggra6344.t1|Name=Ggra6344.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=89bp
MSSHEGHAIGRKTLVQVLQWCLKAGVETVTVYAWSLENFKHPNVEVAEIM
RLALEAAKDFKHKKHFVHKNRVQIRFLGDLKRVPKQLE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001441UPP_synth-like
IPR036424UPP_synth-like_sf