Ggra6340.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6340.t1
Unique NameGgra6340.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length134
Homology
BLAST of Ggra6340.t1 vs. uniprot
Match: A0A2V3IKH7 (Acetyl-CoA carboxylase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKH7_9FLOR)

HSP 1 Score: 207 bits (528), Expect = 8.330e-67
Identity = 100/133 (75.19%), Postives = 112/133 (84.21%), Query Frame = 0
Query:    1 MTQSADLCESQPVITSLQKYVKRLAGKRVISKILMANNGIAAVKAIRSIRRWSYETFGNERTIEFVSMATPEDVAANAEYMPMADMWTSVPSGSNNHNFANVELICDLANRFDCDTVWAGWGHASENPNLPAR 133
            MT++A++C+ QP   SL+K+V  L GKR ISKIL+ANNGIAAVK IRSIRRWS+ETFGNE  I+ VSMAT EDVAANAEYM MADM TSVP GSNNHNFAN+E ICD+ NRFDCD VWAGW  ASENPNLPAR
Sbjct:    1 MTKTAEVCDPQPETNSLRKHVNWLEGKRFISKILIANNGIAAVKGIRSIRRWSHETFGNECNIDLVSMATLEDVAANAEYMRMADMCTSVPGGSNNHNFANIERICDVVNRFDCDAVWAGWQQASENPNLPAR 133          
BLAST of Ggra6340.t1 vs. uniprot
Match: A0A2V3J2N7 (Acetyl-CoA carboxylase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2N7_9FLOR)

HSP 1 Score: 226 bits (577), Expect = 3.430e-66
Identity = 111/133 (83.46%), Postives = 115/133 (86.47%), Query Frame = 0
Query:    1 MTQSADLCESQPVITSLQKYVKRLAGKRVISKILMANNGIAAVKAIRSIRRWSYETFGNERTIEFVSMATPEDVAANAEYMPMADMWTSVPSGSNNHNFANVELICDLANRFDCDTVWAGWGHASENPNLPAR 133
            MT S    +  P  TSLQ YVK+L GKRVI KIL+ANNGIAAVKAIRSIRRW YETFGNERTIEFVSMATPEDVAANAEY+ MADMWTSVP GSNNHNFANVELICDLA RF CD VWAGWGHASENPNLPAR
Sbjct:    1 MTTSVISPQLDPETTSLQNYVKQLGGKRVIRKILIANNGIAAVKAIRSIRRWCYETFGNERTIEFVSMATPEDVAANAEYVRMADMWTSVPGGSNNHNFANVELICDLAYRFACDAVWAGWGHASENPNLPAR 133          
BLAST of Ggra6340.t1 vs. uniprot
Match: R7QB96 (Acetyl-CoA carboxylase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QB96_CHOCR)

HSP 1 Score: 204 bits (520), Expect = 1.620e-58
Identity = 95/117 (81.20%), Postives = 105/117 (89.74%), Query Frame = 0
Query:   17 LQKYVKRLAGKRVISKILMANNGIAAVKAIRSIRRWSYETFGNERTIEFVSMATPEDVAANAEYMPMADMWTSVPSGSNNHNFANVELICDLANRFDCDTVWAGWGHASENPNLPAR 133
            +  YVK L GKR I KIL+ANNGIAAVKAIRSIRRWSYETFGNER +EFVSMATPEDV+ANAEY+ MADMWTSVP GSNNHNFANV+LI D+A+RF CD VWAGWGHASENP+LPA+
Sbjct:   22 IDDYVKSLEGKRSIRKILIANNGIAAVKAIRSIRRWSYETFGNERAVEFVSMATPEDVSANAEYVRMADMWTSVPGGSNNHNFANVDLITDIADRFSCDAVWAGWGHASENPDLPAK 138          
BLAST of Ggra6340.t1 vs. uniprot
Match: T1G003 (Biotin carboxylation domain-containing protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1G003_HELRO)

HSP 1 Score: 167 bits (422), Expect = 1.250e-50
Identity = 79/130 (60.77%), Postives = 96/130 (73.85%), Query Frame = 0
Query:    2 TQSADLCESQPVITSLQKYVKRLAGKRVISKILMANNGIAAVKAIRSIRRWSYETFGNERTIEFVSMATPEDVAANAEYMPMADMWTSVPSGSNNHNFANVELICDLANRFDCDTVWAGWGHASENPNLP 131
            TQS   C+   V T  +++VKR  G RV+ K+L+ANNGIAAVK IRSIRRWSYE F NE+ + FV M TPED+ ANAEY+ +AD +  VP GSNN+N+AN+ELI D+A R     VWAGWGHASENP LP
Sbjct:   14 TQSKGSCKDFTVATP-EEFVKRFGGNRVVDKVLIANNGIAAVKCIRSIRRWSYEMFKNEKAVRFVVMVTPEDLKANAEYIRLADQYVPVPGGSNNNNYANIELILDIAKRTKVQAVWAGWGHASENPKLP 142          
BLAST of Ggra6340.t1 vs. uniprot
Match: A0A3B1J4N2 (Biotin carboxylation domain-containing protein n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A3B1J4N2_ASTMX)

HSP 1 Score: 165 bits (417), Expect = 1.430e-49
Identity = 77/118 (65.25%), Postives = 90/118 (76.27%), Query Frame = 0
Query:   14 ITSLQKYVKRLAGKRVISKILMANNGIAAVKAIRSIRRWSYETFGNERTIEFVSMATPEDVAANAEYMPMADMWTSVPSGSNNHNFANVELICDLANRFDCDTVWAGWGHASENPNLP 131
            + S  ++VKR  G RVI K+L+ANNGIAAVK +RSIRRWSYE F NERTI FV M TPED+ ANAEY+ MAD +  VP G NN+N+ANVE+I D+A R     VWAGWGHASENP LP
Sbjct:   40 VASPAEFVKRFGGSRVIEKVLIANNGIAAVKCMRSIRRWSYEMFRNERTIRFVVMVTPEDLKANAEYIKMADHYVPVPGGPNNNNYANVEMIVDIAKRIPVQAVWAGWGHASENPKLP 157          
BLAST of Ggra6340.t1 vs. uniprot
Match: M2X7M8 (Acetyl-CoA carboxylase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X7M8_GALSU)

HSP 1 Score: 177 bits (448), Expect = 8.070e-49
Identity = 85/127 (66.93%), Postives = 100/127 (78.74%), Query Frame = 0
Query:    9 ESQPVIT--SLQKYVKRLAGKRVISKILMANNGIAAVKAIRSIRRWSYETFGNERTIEFVSMATPEDVAANAEYMPMADMWTSVPSGSNNHNFANVELICDLANRFDCDTVWAGWGHASENPNLPAR 133
            E  P+ T  ++++YV+   GKRVI K+L+ANNGIAAVKAIRS+R+W YE FGNER IEFVSMATPED+ ANAEY+ +AD    VP GSNN N+ANVELI D+A RF  D VWAGWGHASENP LP R
Sbjct:   10 EEYPIQTKNTIEEYVELCHGKRVIRKVLIANNGIAAVKAIRSMRKWLYEVFGNERLIEFVSMATPEDIRANAEYVRLADQLVPVPGGSNNFNYANVELIVDIAERFQVDAVWAGWGHASENPRLPER 136          
BLAST of Ggra6340.t1 vs. uniprot
Match: acetyl-CoA carboxylase-like n=1 Tax=Tachysurus fulvidraco TaxID=1234273 RepID=UPI000F50ADE9 (acetyl-CoA carboxylase-like n=1 Tax=Tachysurus fulvidraco TaxID=1234273 RepID=UPI000F50ADE9)

HSP 1 Score: 164 bits (414), Expect = 1.290e-48
Identity = 75/113 (66.37%), Postives = 89/113 (78.76%), Query Frame = 0
Query:   19 KYVKRLAGKRVISKILMANNGIAAVKAIRSIRRWSYETFGNERTIEFVSMATPEDVAANAEYMPMADMWTSVPSGSNNHNFANVELICDLANRFDCDTVWAGWGHASENPNLP 131
            ++VKR  G R+I K+L+ANNGIAAVK +RSIRRWSYE F NERTI FV M TPED+ ANAEY+ MAD +  VP G+NN+N+ANVE+I D+A R     VWAGWGHASENP LP
Sbjct:   25 EFVKRFGGTRIIEKVLIANNGIAAVKCMRSIRRWSYEMFRNERTIRFVVMVTPEDLKANAEYIKMADHYVPVPGGTNNNNYANVEMIVDIAKRIPVQAVWAGWGHASENPKLP 137          
BLAST of Ggra6340.t1 vs. uniprot
Match: A0A7V5I6S5 (Acetyl-CoA carboxylase (Fragment) n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V5I6S5_9BACT)

HSP 1 Score: 176 bits (445), Expect = 2.030e-48
Identity = 79/118 (66.95%), Postives = 99/118 (83.90%), Query Frame = 0
Query:   16 SLQKYVKRLAGKRVISKILMANNGIAAVKAIRSIRRWSYETFGNERTIEFVSMATPEDVAANAEYMPMADMWTSVPSGSNNHNFANVELICDLANRFDCDTVWAGWGHASENPNLPAR 133
            S+++YV+   G R I ++L+ANNGIAAVK IRS+RRW+YE FG+ER +EFV+MATPEDV ANA+Y+ +AD++  VP GSNNHN+ANVELI D+A R +CD VWAGWGHASENP LPAR
Sbjct:   17 SVRRYVEEHGGSRPIQRLLVANNGIAAVKCIRSMRRWAYEAFGSERALEFVAMATPEDVQANADYIRLADLFVPVPGGSNNHNYANVELIVDIAERNECDAVWAGWGHASENPLLPAR 134          
BLAST of Ggra6340.t1 vs. uniprot
Match: M1V8X5 (Acetyl-CoA carboxylase n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V8X5_CYAM1)

HSP 1 Score: 176 bits (445), Expect = 2.050e-48
Identity = 79/118 (66.95%), Postives = 99/118 (83.90%), Query Frame = 0
Query:   16 SLQKYVKRLAGKRVISKILMANNGIAAVKAIRSIRRWSYETFGNERTIEFVSMATPEDVAANAEYMPMADMWTSVPSGSNNHNFANVELICDLANRFDCDTVWAGWGHASENPNLPAR 133
            S+++YV+   G R I ++L+ANNGIAAVK IRS+RRW+YE FG+ER +EFV+MATPEDV ANA+Y+ +AD++  VP GSNNHN+ANVELI D+A R +CD VWAGWGHASENP LPAR
Sbjct:   17 SVRRYVEEHGGSRPIQRLLVANNGIAAVKCIRSMRRWAYEAFGSERALEFVAMATPEDVQANADYIRLADLFVPVPGGSNNHNYANVELIVDIAERNECDAVWAGWGHASENPLLPAR 134          
BLAST of Ggra6340.t1 vs. uniprot
Match: A0A8D8DIE5 (Acetyl-CoA carboxylase (Fragment) n=1 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8DIE5_CULPI)

HSP 1 Score: 162 bits (411), Expect = 4.010e-48
Identity = 75/119 (63.03%), Postives = 93/119 (78.15%), Query Frame = 0
Query:   13 VITSLQKYVKRLAGKRVISKILMANNGIAAVKAIRSIRRWSYETFGNERTIEFVSMATPEDVAANAEYMPMADMWTSVPSGSNNHNFANVELICDLANRFDCDTVWAGWGHASENPNLP 131
            V+++ +++VK+  G R I+KIL+ANNGIAAVK +RS+RRWSYE F NER + FV M TPED+ ANAEY+ MAD +  VP GSNN+N+ANVELI D+A R     VWAGWGHASENP LP
Sbjct:   76 VLSTTEEFVKKFNGTRAITKILIANNGIAAVKCMRSVRRWSYEMFKNERAVRFVVMVTPEDLKANAEYIKMADHYVPVPGGSNNNNYANVELIVDIALRTQVQAVWAGWGHASENPKLP 194          
The following BLAST results are available for this feature:
BLAST of Ggra6340.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IKH78.330e-6775.19Acetyl-CoA carboxylase n=1 Tax=Gracilariopsis chor... [more]
A0A2V3J2N73.430e-6683.46Acetyl-CoA carboxylase n=1 Tax=Gracilariopsis chor... [more]
R7QB961.620e-5881.20Acetyl-CoA carboxylase n=1 Tax=Chondrus crispus Ta... [more]
T1G0031.250e-5060.77Biotin carboxylation domain-containing protein n=1... [more]
A0A3B1J4N21.430e-4965.25Biotin carboxylation domain-containing protein n=1... [more]
M2X7M88.070e-4966.93Acetyl-CoA carboxylase n=1 Tax=Galdieria sulphurar... [more]
acetyl-CoA carboxylase-like n=1 Tax=Tachysurus fulvidraco TaxID=1234273 RepID=UPI000F50ADE91.290e-4866.37acetyl-CoA carboxylase-like n=1 Tax=Tachysurus ful... [more]
A0A7V5I6S52.030e-4866.95Acetyl-CoA carboxylase (Fragment) n=1 Tax=bacteriu... [more]
M1V8X52.050e-4866.95Acetyl-CoA carboxylase n=1 Tax=Cyanidioschyzon mer... [more]
A0A8D8DIE54.010e-4863.03Acetyl-CoA carboxylase (Fragment) n=1 Tax=Culex pi... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.20coord: 2..133
e-value: 1.0E-48
score: 167.2
NoneNo IPR availablePANTHERPTHR45728ACETYL-COA CARBOXYLASE, ISOFORM Acoord: 17..132
IPR005481Biotin carboxylase-like, N-terminal domainPFAMPF00289Biotin_carb_Ncoord: 30..132
e-value: 8.6E-21
score: 74.6
IPR011764Biotin carboxylation domainPROSITEPS50979BCcoord: 29..133
score: 17.417292
IPR016185Pre-ATP-grasp domain superfamilySUPERFAMILY52440PreATP-grasp domaincoord: 13..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000096_piloncontigtig00000096_pilon:270466..270867 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6340.t1Ggra6340.t1Gracilaria gracilis GNS1m malemRNAtig00000096_pilon 270466..270867 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6340.t1 ID=Ggra6340.t1|Name=Ggra6340.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=134bp
MTQSADLCESQPVITSLQKYVKRLAGKRVISKILMANNGIAAVKAIRSIR
RWSYETFGNERTIEFVSMATPEDVAANAEYMPMADMWTSVPSGSNNHNFA
NVELICDLANRFDCDTVWAGWGHASENPNLPAR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005481BC-like_N
IPR011764Biotin_carboxylation_dom
IPR016185PreATP-grasp_dom_sf