Ggra6295.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6295.t1
Unique NameGgra6295.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length609
Homology
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BLAST of Ggra6295.t1 vs. uniprot
Match: A0A2V3IK15 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK15_9FLOR)

HSP 1 Score: 175 bits (444), Expect = 1.680e-48
Identity = 82/135 (60.74%), Postives = 103/135 (76.30%), Query Frame = 0 
Query:  474 QFSRVVALCVKLSEGTWLVETESGYYPDRFHSYMAPTKKTLGPYKTRQMAVNMGKNQVGSVYGIDWDEVASGGDLEIVVDNATRWEVCWSPPDSEYSRVVVKLVTAAPAQSGGNSMPARGEESDNDDYEGFPVMF 608
            +FSRV+AL V+++EG WLVETESGY+PD FHSY+APTKKTLGPY+TR++AV +GK QV  VYGI W EV SGGD E V D++ RWEV WSPPDSEYSRVVVKLV +A     GN+     E  +++D + +  M+
Sbjct:    9 KFSRVIALRVRVNEGRWLVETESGYFPDGFHSYIAPTKKTLGPYQTREIAVGVGKRQVCKVYGISWGEVVSGGDFETVADSSVRWEVLWSPPDSEYSRVVVKLVGSALTHIDGNNSTKDMEVEEDEDVDEYHCMY 143
The following BLAST results are available for this feature:
BLAST of Ggra6295.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IK151.680e-4860.74Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 285..305
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 146..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 224..238
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..271
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 361..385

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000879_piloncontigtig00000879_pilon:470012..471838 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6295.t1Ggra6295.t1Gracilaria gracilis GNS1m malemRNAtig00000879_pilon 470012..471838 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6295.t1 ID=Ggra6295.t1|Name=Ggra6295.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=609bp
MAPRKPQQPTSGVVRRVVRTVTTEEVIEHIVEPSSSTPSRKTAKPKTPIK
KKTAKASSSASSSRSTTKPKAKPSVKKAEPKTIAGKKAEPKTIAVKKTKP
KTTTVKKAEPKTTTVKKAVPKTTTVKKTEPKTTTVKKAEPKTTTVKKAPA
SASKTKQTAKSRPKSNSATSATKAKAPTVKRTGTKTVISSTQKKTAAKGT
SSKAATGIKETKASATKAKPNIAKATGVKKEKKSLSVQPSIKKKTVSKPA
RKNVKKSTAAKSEPTAAQLNEAQKLHAEMRAKMFNEALQVARMEARAEFQ
RLASKGQDVTNSAVKTPKAEPLSFVSRGAPGPSSFGLEQRSGANPLFVTP
GVRARRVKQTARRTVSTPIPSSSRSAAQSVARSNHGTRAVNQDEVWILSH
ETGYVPDGFHSAELPERKEVGTFTSRADAVKEGKRLVGNDVGYSWAEVCE
AGDLEVEEDSSKKWEICWSPPDSQFSRVVALCVKLSEGTWLVETESGYYP
DRFHSYMAPTKKTLGPYKTRQMAVNMGKNQVGSVYGIDWDEVASGGDLEI
VVDNATRWEVCWSPPDSEYSRVVVKLVTAAPAQSGGNSMPARGEESDNDD
YEGFPVMF*
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