Ggra6265.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6265.t1
Unique NameGgra6265.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length152
Homology
BLAST of Ggra6265.t1 vs. uniprot
Match: A0A2V3IMB4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMB4_9FLOR)

HSP 1 Score: 196 bits (498), Expect = 6.290e-62
Identity = 91/142 (64.08%), Postives = 113/142 (79.58%), Query Frame = 0
Query:    1 MPNVEKKIHIDATPEQVYKVLMDFPSYPDWNPMVIRVEGDPSPSSSITAHIQINPGKPQVFTPLVLKNEPNKEFRWVGKFILPFIFRGEHYFVIGQEKEGGCTFIHGEDFSGVLTPLILSMFGDNLPKAFEAFNQAIKERVE 142
            M +VEKKI I+ATPEQ Y VLMDFPSYP+WNPMV+ ++GD SPSS++T  I++    PQ F P VLKNE N+EFRWVGK +L  ++RGEHYF+I    EGGCTF+HGE FSGVL+  + +M G++LPKAFEAFN A+KERVE
Sbjct:    1 MSDVEKKIVINATPEQTYNVLMDFPSYPEWNPMVLSIDGDTSPSSTLTVSIKVGARAPQSFKPTVLKNEVNREFRWVGKLLLACLYRGEHYFIIEGNSEGGCTFVHGERFSGVLSSPLNNMMGEDLPKAFEAFNNALKERVE 142          
BLAST of Ggra6265.t1 vs. uniprot
Match: A0A3C2ANK3 (SRPBCC domain-containing protein n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A3C2ANK3_9FLAO)

HSP 1 Score: 132 bits (331), Expect = 1.270e-36
Identity = 67/147 (45.58%), Postives = 89/147 (60.54%), Query Frame = 0
Query:    1 MPNVEKKIHIDATPEQVYKVLMDFPSYPDWNPMVIRVEGDPSPSSSITAHIQINPGKPQVFTPLVLKNEPNKEFRWVGKFILPFIFRGEHYFVIGQEKEGGCTFIHGEDFSGVLTPLILSMFGDNLPKAFEAFNQAIKERVEAGLNA 147
            M N+E +I I+A+ + V+ VL DF SYP+WNP VI+++G       +T  I++     Q F PLVL  + NKEFRW GK  +  +F GEHYF +    E    FIHGE FSGVL  L++ + G+     FEA N A+K RVE  LNA
Sbjct:    1 MKNLETRIRINASVDDVWNVLTDFKSYPEWNPFVIKIDGKGEVGQHLTNDIKMEGSAVQTFRPLVLVRDENKEFRWKGKLFVTGLFDGEHYFQLKSISENETEFIHGEIFSGVLVALVMGLIGEKTKAGFEAMNTALKNRVE-NLNA 146          
BLAST of Ggra6265.t1 vs. uniprot
Match: SRPBCC domain-containing protein n=2 Tax=Pseudanabaenales TaxID=2881377 RepID=UPI00146B0D05 (SRPBCC domain-containing protein n=2 Tax=Pseudanabaenales TaxID=2881377 RepID=UPI00146B0D05)

HSP 1 Score: 130 bits (328), Expect = 3.610e-36
Identity = 63/145 (43.45%), Postives = 85/145 (58.62%), Query Frame = 0
Query:    1 MPNVEKKIHIDATPEQVYKVLMDFPSYPDWNPMVIRVEGDPSPSSSITAHIQINPGKPQVFTPLVLKNEPNKEFRWVGKFILPFIFRGEHYFVIGQEKEGGCTFIHGEDFSGVLTPLILSMFGDNLPKAFEAFNQAIKERVEAGL 145
            M  +   I IDA P  V+++LMDFP+YPDWNP +  ++G   P + + A +Q   G+   F P VL  +P +EFRW GK I+P +F GEH F I         FIH E FSG+L PL+      N+ + FEA N+A+K R E GL
Sbjct:    1 MKELTTAIAIDAAPSVVWQILMDFPAYPDWNPFIRSIQGQALPGAQLVARLQPPGGQAMTFKPTVLVADPEREFRWRGKLIVPGLFDGEHRFQIESLAANRVQFIHSEQFSGLLVPLLAKSLDTNVRQGFEAMNRALKARAETGL 145          
BLAST of Ggra6265.t1 vs. uniprot
Match: A0A2E9G8G9 (Polyketide cyclase n=1 Tax=Thalassobius sp. TaxID=1979401 RepID=A0A2E9G8G9_9RHOB)

HSP 1 Score: 128 bits (322), Expect = 3.490e-35
Identity = 63/142 (44.37%), Postives = 90/142 (63.38%), Query Frame = 0
Query:    1 MPNVEKKIHIDATPEQVYKVLMDFPSYPDWNPMVIRVEGDPSPSSSITAHIQINPGKPQVFTPLVLKNEPNKEFRWVGKFILPFIFRGEHYFVIGQEKEGGCTFIHGEDFSGVLTPLILSMFGDNLPKAFEAFNQAIKERVE 142
            M  ++ +I I A+ + V+KVLMDF +YP+WNP +  + G+      +  +IQ      Q F P VLKNE N+EFRW+GKF++  +F GEHYF + +E+ G   F HGE+FSG+L  ++L M G      FE  NQA+KE+VE
Sbjct:    1 MQKLKTEISIQASAQDVWKVLMDFENYPNWNPFIKSISGEKHVGCKLKVNIQPEGMSEQQFLPNVLKNEENREFRWLGKFLVKGLFDGEHYFKL-REENGKVIFTHGENFSGLLVGILLKMIGAKTQAGFEQMNQALKEKVE 141          
BLAST of Ggra6265.t1 vs. uniprot
Match: A0A7Y8LGE1 (SRPBCC domain-containing protein n=1 Tax=Bryobacteraceae bacterium TaxID=2212468 RepID=A0A7Y8LGE1_9BACT)

HSP 1 Score: 127 bits (318), Expect = 1.150e-34
Identity = 64/142 (45.07%), Postives = 86/142 (60.56%), Query Frame = 0
Query:    1 MPNVEKKIHIDATPEQVYKVLMDFPSYPDWNPMVIRVEGDPSPSSSITAHIQINPGKPQVFTPLVLKNEPNKEFRWVGKFILPFIFRGEHYFVIGQEKEGGCTFIHGEDFSGVLTPLILSMFGDNLPKAFEAFNQAIKERVE 142
            M  V  ++ IDA  ++V+KVL+DF +YP WNP V ++EG P P S +   I+   G+   F P+VLK +PN+E RW+G F+LP IF GEH F+I    E    FIH E F+G+L  L+ S         FEA NQA+K R E
Sbjct:    1 MHEVTTELIIDAPAQRVWKVLIDFAAYPAWNPFVRKIEGAPKPGSRLKVVIRPPGGQGMTFKPVVLKADPNRELRWLGHFLLPGIFDGEHCFIIEPVSESRVRFIHSERFNGILVALMRSSLDGGTRAGFEAMNQALKARAE 142          
BLAST of Ggra6265.t1 vs. uniprot
Match: SRPBCC domain-containing protein n=1 Tax=Lewinella cohaerens TaxID=70995 RepID=UPI00036B6BCF (SRPBCC domain-containing protein n=1 Tax=Lewinella cohaerens TaxID=70995 RepID=UPI00036B6BCF)

HSP 1 Score: 121 bits (304), Expect = 1.420e-32
Identity = 61/143 (42.66%), Postives = 86/143 (60.14%), Query Frame = 0
Query:    1 MPNVEKKIHIDATPEQVYKVLMDFPSYPDWNPMVIRVEGDPSPSSSITAHIQINPGKPQVFTPLVLKNEPNKEFRWVGKFILPFIFRGEHYFVIGQEKEGGCTFIHGEDFSGVLTPLILSMFGDNLPKAFEAFNQAIKERVEA 143
            M  +   I IDA    V+ +LMD  +YP WNP + +++G+ +  ++I A IQ    K   FTP+V  N+P +EFRW+G    P +F GEHYF++    EG   FIHGE FSG+L+ +IL M  +N    F A N+A+K R EA
Sbjct:    1 MKTITTSIVIDAPIATVWAILMDQEAYPQWNPFIQKLQGELAIGNTIRATIQAPGQKAMNFTPVVKVNQPEREFRWLGHLFFPGLFDGEHYFLLEDLGEGQTKFIHGEQFSGILSGIILKMIRENTKVGFLAMNEALKARAEA 143          
BLAST of Ggra6265.t1 vs. uniprot
Match: A0A1F2ZZH5 (Polyketide cyclase n=1 Tax=Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_66_14 TaxID=1797225 RepID=A0A1F2ZZH5_9PROT)

HSP 1 Score: 120 bits (301), Expect = 4.050e-32
Identity = 58/143 (40.56%), Postives = 86/143 (60.14%), Query Frame = 0
Query:    1 MPNVEKKIHIDATPEQVYKVLMDFPSYPDWNPMVIRVEGDPSPSSSITAHIQINPGKPQVFTPLVLKNEPNKEFRWVGKFILPFIFRGEHYFVIGQEKEGGCTFIHGEDFSGVLTPLILSMFGDNLPKAFEAFNQAIKERVEA 143
            M  +   + IDA    +++VL+DF +YP+WNP + R+EG+P   + +   +Q    +P  F P +L  EP +E RW+G+ +LP +F GEH FVI + K+GGC   H E F G+L PL   M  +   + F A N+A+K RVEA
Sbjct:    1 MRRLATAVDIDAAAAAIWRVLVDFAAYPEWNPFIRRIEGEPRVGTRLQVTVQPGDRRPMTFKPTILVAEPERELRWLGRVLLPGVFDGEHTFVI-EPKQGGCRLRHEESFRGLLVPLFGGMLVET-ERGFTAMNEALKRRVEA 141          
BLAST of Ggra6265.t1 vs. uniprot
Match: A0A316TR28 (SRPBCC domain-containing protein n=1 Tax=Rhodohalobacter mucosus TaxID=2079485 RepID=A0A316TR28_9BACT)

HSP 1 Score: 119 bits (299), Expect = 9.120e-32
Identity = 61/143 (42.66%), Postives = 83/143 (58.04%), Query Frame = 0
Query:    1 MPNVEKKIHIDATPEQVYKVLMDFPSYPDWNPMVIRVEGDPSPSSSITAHIQINPGKPQVFTPLVLKNEPNKEFRWVGKFILPFIFRGEHYFVIGQEKEGGCTFIHGEDFSGVLTPLILSMFGDNLPKAFEAFNQAIKERVEA 143
            M  +E  IHI    + V+ VLMDF SYP+WNP V  +EGD SP  +++  +Q+   K   FTP VL+ EP+ EFRW GK  +  +F GEHYF++     G  +  HGE FSG+L P ++          F+  N A+KER EA
Sbjct:    1 MKKIETVIHIHTPLQNVWNVLMDFQSYPEWNPFVKSIEGDVSPGHTLSVTLQLPGEKEMNFTPRVLRAEPHHEFRWKGKLFIKGLFDGEHYFILNPLPNGSTSLKHGETFSGIL-PRLMPGILKKTKTGFQNMNVALKERCEA 142          
BLAST of Ggra6265.t1 vs. uniprot
Match: SRPBCC domain-containing protein n=1 Tax=Leptolyngbya sp. KIOST-1 TaxID=1229172 RepID=UPI0005697817 (SRPBCC domain-containing protein n=1 Tax=Leptolyngbya sp. KIOST-1 TaxID=1229172 RepID=UPI0005697817)

HSP 1 Score: 119 bits (299), Expect = 9.380e-32
Identity = 59/138 (42.75%), Postives = 82/138 (59.42%), Query Frame = 0
Query:    8 IHIDATPEQVYKVLMDFPSYPDWNPMVIRVEGDPSPSSSITAHIQINPGKPQVFTPLVLKNEPNKEFRWVGKFILPFIFRGEHYFVIGQEKEGGCTFIHGEDFSGVLTPLILSMFGDNLPKAFEAFNQAIKERVEAGL 145
            I I+A+P+ V+++L DF +Y  WNP +  + G     S + A IQ   G+   F P VL  EP KEFRW+G+ ++P +F GEH F I    +    FIHGE FSG+L PL+      ++   FEA NQA+K R EAG+
Sbjct:    9 IDIEASPQTVWQILTDFSAYGQWNPFIRSISGAAVQGSRLEAQIQPPGGQGMTFKPTVLVAEPEKEFRWLGRLLIPGLFDGEHRFQIEPLGDNRVRFIHGETFSGLLVPLLAKSLDTDVRTGFEAMNQALKARAEAGM 146          
BLAST of Ggra6265.t1 vs. uniprot
Match: A0A2K4MRE4 (SRPBCC domain-containing protein n=5 Tax=Chromobacterium TaxID=535 RepID=A0A2K4MRE4_9NEIS)

HSP 1 Score: 118 bits (296), Expect = 2.990e-31
Identity = 59/148 (39.86%), Postives = 85/148 (57.43%), Query Frame = 0
Query:    3 NVEKKIHIDATPEQVYKVLMDFPSYPDWNPMVIRVEGDPSPSSSITAHIQINPGKPQVFTPLVLKNEPNKEFRWVGKFILPFIFRGEHYFVIGQEKEGGCTFIHGEDFSGVLTPLILSMFGDNLPKAFEAFNQAIKERVEAGLNAGPS 150
            ++  +I I A P+QV++VL D+P YP+WNP ++ + G     +S+ A I    G+   F P ++     ++ RW GK +LP +F GEHYF +    +GG  F HGEDFSG+L PLI     DN    F   NQA+K R EA  +  P+
Sbjct:    5 SIATEIDIAAAPDQVWRVLTDWPRYPEWNPFIVGLHGRRETGASLVATIHPPGGRRMTFRPRLMAFAAAQQLRWRGKLLLPGLFDGEHYFRLEALADGGTRFHHGEDFSGILLPLIGGALLDNTRSGFVLMNQALKRRCEALASQAPA 152          
The following BLAST results are available for this feature:
BLAST of Ggra6265.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IMB46.290e-6264.08Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A3C2ANK31.270e-3645.58SRPBCC domain-containing protein n=1 Tax=Flavobact... [more]
SRPBCC domain-containing protein n=2 Tax=Pseudanabaenales TaxID=2881377 RepID=UPI00146B0D053.610e-3643.45SRPBCC domain-containing protein n=2 Tax=Pseudanab... [more]
A0A2E9G8G93.490e-3544.37Polyketide cyclase n=1 Tax=Thalassobius sp. TaxID=... [more]
A0A7Y8LGE11.150e-3445.07SRPBCC domain-containing protein n=1 Tax=Bryobacte... [more]
SRPBCC domain-containing protein n=1 Tax=Lewinella cohaerens TaxID=70995 RepID=UPI00036B6BCF1.420e-3242.66SRPBCC domain-containing protein n=1 Tax=Lewinella... [more]
A0A1F2ZZH54.050e-3240.56Polyketide cyclase n=1 Tax=Alphaproteobacteria bac... [more]
A0A316TR289.120e-3242.66SRPBCC domain-containing protein n=1 Tax=Rhodohalo... [more]
SRPBCC domain-containing protein n=1 Tax=Leptolyngbya sp. KIOST-1 TaxID=1229172 RepID=UPI00056978179.380e-3242.75SRPBCC domain-containing protein n=1 Tax=Leptolyng... [more]
A0A2K4MRE42.990e-3139.86SRPBCC domain-containing protein n=5 Tax=Chromobac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019587Polyketide cyclase/dehydrasePFAMPF10604Polyketide_cyc2coord: 2..138
e-value: 2.4E-11
score: 44.1
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 1..143
e-value: 4.2E-24
score: 87.1
NoneNo IPR availablePANTHERPTHR36166CHROMOSOME 9, WHOLE GENOME SHOTGUN SEQUENCEcoord: 2..144
NoneNo IPR availableCDDcd07822SRPBCC_4coord: 4..142
e-value: 3.09332E-51
score: 158.259
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 1..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000879_piloncontigtig00000879_pilon:363354..363809 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6265.t1Ggra6265.t1Gracilaria gracilis GNS1m malemRNAtig00000879_pilon 363354..363809 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6265.t1 ID=Ggra6265.t1|Name=Ggra6265.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=152bp
MPNVEKKIHIDATPEQVYKVLMDFPSYPDWNPMVIRVEGDPSPSSSITAH
IQINPGKPQVFTPLVLKNEPNKEFRWVGKFILPFIFRGEHYFVIGQEKEG
GCTFIHGEDFSGVLTPLILSMFGDNLPKAFEAFNQAIKERVEAGLNAGPS
S*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019587Polyketide_cyclase/dehydratase
IPR023393START-like_dom_sf