Ggra6264.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6264.t1
Unique NameGgra6264.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length126
Homology
BLAST of Ggra6264.t1 vs. uniprot
Match: A0A2V3IMD8 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMD8_9FLOR)

HSP 1 Score: 241 bits (616), Expect = 2.760e-80
Identity = 106/125 (84.80%), Postives = 115/125 (92.00%), Query Frame = 0
Query:    1 MHCFVGEDKLKNRFFENKNETYGRDRWVEYVDDRNPDSLKITPEWHAWLHHNIDEPPTEKPLPKPIYQAEETGNPTGTRDAYVPAHHRLAKNSVGGASEKYESWKPGAESAPSKVGSGKDVYDLK 125
            M CFVGEDK KNRFFENKNETYGRDRWVEYVDDRNPDSLKITPEWHAWLHHN+DEPPT+ PLPKPIYQAEETGNPTGTR+AYVP HH+LAKNSVG ASEKYESW+PG+E+A ++V   KDV DLK
Sbjct:   32 MQCFVGEDKFKNRFFENKNETYGRDRWVEYVDDRNPDSLKITPEWHAWLHHNVDEPPTDHPLPKPIYQAEETGNPTGTREAYVPPHHKLAKNSVGSASEKYESWRPGSEAADTEVDDRKDVLDLK 156          
BLAST of Ggra6264.t1 vs. uniprot
Match: R7QPI6 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPI6_CHOCR)

HSP 1 Score: 183 bits (464), Expect = 4.220e-57
Identity = 81/127 (63.78%), Postives = 98/127 (77.17%), Query Frame = 0
Query:    1 MHCFVGEDKLKNRFFENKNETYGRDRWVEYVDDRNPDSLKITPEWHAWLHHNIDEPPTEKPLPKPIYQAEETGNPTGTRDAYVPAHHRLAKNSVGGASEKYESWKP-GAESAPS-KVGSGKDVYDLK 125
            M C+VGED  +NR+FE++ ETYGRDRWVEYVD+RNPDSLK+ PEWHAWLHHN D+ P++ PLP+P+Y+   +GNPTGTRDAYVP HHRL+K   G ASEKYE+W P G + A   K  S   V DLK
Sbjct:   32 MSCYVGEDTFQNRYFEDRTETYGRDRWVEYVDERNPDSLKVEPEWHAWLHHNTDDAPSQHPLPRPVYEKPSSGNPTGTRDAYVPPHHRLSKKFDGNASEKYETWAPQGRKKAEGGKPDSEDKVLDLK 158          
BLAST of Ggra6264.t1 vs. uniprot
Match: A0A7S1TNU8 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TNU8_9RHOD)

HSP 1 Score: 128 bits (322), Expect = 2.130e-35
Identity = 65/126 (51.59%), Postives = 80/126 (63.49%), Query Frame = 0
Query:    5 VGEDKLKNRFFENKNETYGRDRWVEYVDDRNP--DSLKITPEWHAWLHHNIDEPPTEKPLPKPIYQAEETGNPTGTRDAYVPAHHRLAKNSVGGASEKYESWKPGA---ESAPSKVGSGKDVYDLK 125
            VGED L NR+FEN+  +YGR RWVEY + R+   DS+KI PEWHAW+ +  DE P+  P  KP YQAE T N TGT+D YV  H  +AK+  G A EK  +W P A    +A      GKD+YDLK
Sbjct:   43 VGEDALGNRYFENRAMSYGRHRWVEYAEQRHVSFDSVKIPPEWHAWVSYISDELPSRTPPAKPAYQAEITRNMTGTKDRYVSNHSLMAKHYSGRAREKVRAWDPSAARTRTALDLPADGKDIYDLK 168          
BLAST of Ggra6264.t1 vs. uniprot
Match: M2Y2Q1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y2Q1_GALSU)

HSP 1 Score: 124 bits (311), Expect = 9.560e-34
Identity = 55/105 (52.38%), Postives = 68/105 (64.76%), Query Frame = 0
Query:    1 MHCFVGEDKLKNRFFENKNETYGRDRWVEYVD-DRNPDSLKITPEWHAWLHHNIDEPPTEKPLPKPIYQAEETGNPTGTRDAYVPAHHRLAKNSVGGASEKYESW 104
            M  FVGED+  NR+F+  N+   +DRWVEY   D  PD   + PEWHAWLHH+IDEPPT  P  +PIYQ +   N TGT DAY P ++ L+KN  G A +K E W
Sbjct:   31 MKYFVGEDEFHNRYFQKVNDVMLKDRWVEYASKDFTPDPYSLPPEWHAWLHHSIDEPPTRTPFQRPIYQGQIVANRTGTTDAYFPKNNPLSKNFKGLAKDKLEQW 135          
BLAST of Ggra6264.t1 vs. uniprot
Match: A0A7S1TEA9 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TEA9_9RHOD)

HSP 1 Score: 112 bits (280), Expect = 3.250e-29
Identity = 57/123 (46.34%), Postives = 75/123 (60.98%), Query Frame = 0
Query:    5 VGEDKLKNRFFENKNETYGRDRWVEYVDDR--NPDSLKITPEWHAWLHHNIDEPPTEKPLPKPIYQAEETGNPTGTRDAYVPAHHRLAKNSVGGASEKYESWKPGAESAPSKVGSGKDVYDLK 125
            VGED L NR++EN+ ++YGRDRWV+Y + R    D LK+ P WHAWL H +DE P++ P+  P YQ E T N TG+  AYV     L+    G    K E+W PG  ++ S   + KDV DLK
Sbjct:   35 VGEDHLGNRYYENRGDSYGRDRWVDYKEARPLRFDPLKVPPAWHAWLAHMVDEAPSKHPVAIPKYQGEITENFTGSSRAYVQPSSPLSPRFAGPERGKLETWTPGNRASNS---ADKDVLDLK 154          
BLAST of Ggra6264.t1 vs. uniprot
Match: A0A8H7UP59 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7UP59_MORIS)

HSP 1 Score: 96.7 bits (239), Expect = 2.800e-23
Identity = 46/108 (42.59%), Postives = 66/108 (61.11%), Query Frame = 0
Query:    3 CFVGEDKLKNRFFENKNETYGRDRWVEYVDDRNPDSLKITPEWHAWLHHNIDEPPTEKPLPKPIYQAEETGNPTGTRDAYVPAHHRLAKNSVGGASEKYESWKPGAES 110
              +G D + N++FEN +E YGR+RWVEY  + +PD  +ITPEWH W++  + EPPTE  L    ++   T N TGT++AYVP       N+V     KY +W+P  +S
Sbjct:   33 ALIGTDAVGNKYFENNDEIYGRERWVEYASN-DPDPAQITPEWHMWINKFVQEPPTEMNLKPTKFEGAPTPNFTGTKNAYVPY------NTV---RPKYSAWEPQVKS 130          
BLAST of Ggra6264.t1 vs. uniprot
Match: A0A8H7QBG6 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7QBG6_9FUNG)

HSP 1 Score: 95.5 bits (236), Expect = 7.950e-23
Identity = 45/108 (41.67%), Postives = 65/108 (60.19%), Query Frame = 0
Query:    3 CFVGEDKLKNRFFENKNETYGRDRWVEYVDDRNPDSLKITPEWHAWLHHNIDEPPTEKPLPKPIYQAEETGNPTGTRDAYVPAHHRLAKNSVGGASEKYESWKPGAES 110
              +G D + N++FEN +E +GR+RWVEY  + +PD  ++TP+WH WL   + EPPTE  +    +  E T N TGTR+AYVP       N+V     KY +W+P  +S
Sbjct:   33 ALIGTDSVGNKYFENNDEIFGRERWVEYASN-DPDPAQVTPDWHMWLTKFVQEPPTEMDIQPKKFWGEPTPNYTGTRNAYVPY------NTV---RPKYNAWEPEVKS 130          
BLAST of Ggra6264.t1 vs. uniprot
Match: A0A2E7HMH2 (NADH:ubiquinone oxidoreductase subunit NDUFA12 n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7HMH2_9PROT)

HSP 1 Score: 93.6 bits (231), Expect = 3.260e-22
Identity = 44/104 (42.31%), Postives = 62/104 (59.62%), Query Frame = 0
Query:    5 VGEDKLKNRFFENKNETYGR--DRWVEYVDDRNPDSLKITPEWHAWLHHNIDEPPTEKPLPKPIYQAEETGNPTGTRDAYVPAHHRLAKNSVGGASEKYESWKP 106
            VGEDK  NR+F  K  +  R   RWV Y    +P++ K+ P+WHAWLH  I EPP+ +PLP+  ++ +   N TGT+ AY+P  H L       A+  YE+W+P
Sbjct:   17 VGEDKFGNRYFHEKGVSVDRLRRRWVLYKG--SPEASKVPPDWHAWLHRTISEPPSREPLPEKPWEKDHLPNLTGTKAAYLPQGHILRGGERAPATGDYEAWQP 118          
BLAST of Ggra6264.t1 vs. uniprot
Match: W6K702 (Putative NADH-ubiquinone oxidoreductase subunit B17.2 (Complex I-B17.2) (CI-B17.2) n=1 Tax=Magnetospira sp. (strain QH-2) TaxID=1288970 RepID=W6K702_MAGSQ)

HSP 1 Score: 92.8 bits (229), Expect = 6.370e-22
Identity = 44/106 (41.51%), Postives = 63/106 (59.43%), Query Frame = 0
Query:    5 VGEDKLKNRFFENKNETYGRDR-WVEYVDDRNPDSLKITPEWHAWLHHNIDEPPTEKPLPKPIYQAEETGNPTGTRDAYVPAHHRLAKNSVGGASEKYESWKPGAE 109
            VG+D+  NR+F N+ +  GR+R WV Y   R  ++ K+ PEWHAWLHH ++EP T+       +Q E   N TGT+ A+VP  H LA      A+  Y++W PG +
Sbjct:   16 VGKDQYGNRYFRNRKKLQGRERRWVLYKGSR--EASKVPPEWHAWLHHTVEEPLTDDASDAAAWQQEHLPNLTGTQFAFVPPGHDLAGGKRSKATGDYQAWTPGED 119          
BLAST of Ggra6264.t1 vs. uniprot
Match: A0A7J7IPH3 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IPH3_9RHOD)

HSP 1 Score: 95.5 bits (236), Expect = 2.470e-21
Identity = 45/106 (42.45%), Postives = 62/106 (58.49%), Query Frame = 0
Query:    3 CFVGEDKLKNRFFENKNETYGRDRWVEYVDDRNPDSLKITPEWHAWLHHNIDEPPT--EKPLPKPIYQAEETGNPTGTRDAYVPAHHRLAKNSVGG-ASEKYESWK 105
            C VGED+  NR++EN+N +Y RDRW EY D +N D + + PEWHAWLHH +D+PP   E    +P +      N +GT  AY P +   +   VG  A+   E W+
Sbjct:  150 CLVGEDEFGNRYYENRNASYMRDRWCEYKDPKNADPMYMPPEWHAWLHHFVDDPPVSAEAKWVRPTFVKPPHPNYSGTSLAYAPRNSPRSPVYVGHLATSAVEPWE 255          
The following BLAST results are available for this feature:
BLAST of Ggra6264.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IMD82.760e-8084.80NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
R7QPI64.220e-5763.78NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A7S1TNU82.130e-3551.59NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
M2Y2Q19.560e-3452.38NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A7S1TEA93.250e-2946.34NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A8H7UP592.800e-2342.59NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A8H7QBG67.950e-2341.67NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A2E7HMH23.260e-2242.31NADH:ubiquinone oxidoreductase subunit NDUFA12 n=1... [more]
W6K7026.370e-2241.51Putative NADH-ubiquinone oxidoreductase subunit B1... [more]
A0A7J7IPH32.470e-2142.45NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007763NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12PFAMPF05071NDUFA12coord: 4..106
e-value: 5.2E-26
score: 91.5
IPR007763NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12PANTHERPTHR12910NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2coord: 4..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..125
NoneNo IPR availablePANTHERPTHR12910:SF2NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 12coord: 4..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000879_piloncontigtig00000879_pilon:362636..363076 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6264.t1Ggra6264.t1Gracilaria gracilis GNS1m malemRNAtig00000879_pilon 362636..363076 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6264.t1 ID=Ggra6264.t1|Name=Ggra6264.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=126bp
MHCFVGEDKLKNRFFENKNETYGRDRWVEYVDDRNPDSLKITPEWHAWLH
HNIDEPPTEKPLPKPIYQAEETGNPTGTRDAYVPAHHRLAKNSVGGASEK
YESWKPGAESAPSKVGSGKDVYDLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007763NDUFA12