Ggra626.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra626.t1
Unique NameGgra626.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length74
Homology
BLAST of Ggra626.t1 vs. uniprot
Match: A0A5E3WUA2 (Signal peptidase complex subunit 1 n=1 Tax=Peniophora sp. CBMAI 1063 TaxID=718367 RepID=A0A5E3WUA2_9AGAM)

HSP 1 Score: 59.3 bits (142), Expect = 6.180e-10
Identity = 27/65 (41.54%), Postives = 40/65 (61.54%), Query Frame = 0
Query:    2 DLRGQFASERLFVALMWALTLLAALLTFAADDVRVMFGAFGGGLLLVSAICVPEWPCFNRHPLRF 66
            D  GQ  +ER++   + A+T LA +  F A D+R+ F     G L V+AI VP WP FN+HP+++
Sbjct:   13 DFEGQKLAERIYTVALAAITTLAFIAGFVAQDIRLTFAIVAVGSLGVAAIVVPPWPMFNKHPVQW 77          
BLAST of Ggra626.t1 vs. uniprot
Match: A0A2P6V303 (Signal peptidase complex subunit 1 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V303_9CHLO)

HSP 1 Score: 58.2 bits (139), Expect = 2.450e-9
Identity = 29/66 (43.94%), Postives = 39/66 (59.09%), Query Frame = 0
Query:    1 MDLRGQFASERLFVALMWALTLLAALLTFAADDVRVMFGAFGGGLLLVSAICVPEWPCFNRHPLRF 66
            MDL GQ  +E L + L+ A  LL   + F   D   M   F GG+ LV+A  VP+WP FNRHP+++
Sbjct:    1 MDLNGQKLAETLCMYLVMAAALLGFAVGFLRHDFSQMMAVFTGGVGLVAAATVPDWPVFNRHPIKW 66          
BLAST of Ggra626.t1 vs. uniprot
Match: A0A446NUF4 (Uncharacterized protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446NUF4_TRITD)

HSP 1 Score: 57.8 bits (138), Expect = 2.750e-9
Identity = 27/70 (38.57%), Postives = 44/70 (62.86%), Query Frame = 0
Query:    1 MDLRGQFASERLFVALMWALTLLAALLTFAADDVRVMFGAFGGGLLLVSAICVPEWPCFNRHPLRFAAAS 70
            MD +GQ ++E L   L+ A  + A L+ +A  D ++M   + GG++L + + VP WP FNRHPL++  A+
Sbjct:    1 MDWQGQKSAEMLMQVLLVASAVAAFLVGYAMADFQLMLLVYAGGVVLTALVTVPNWPFFNRHPLKWLDAA 70          
BLAST of Ggra626.t1 vs. uniprot
Match: A0A3B6GYD4 (Uncharacterized protein n=3 Tax=Triticinae TaxID=1648030 RepID=A0A3B6GYD4_WHEAT)

HSP 1 Score: 57.8 bits (138), Expect = 3.160e-9
Identity = 27/70 (38.57%), Postives = 44/70 (62.86%), Query Frame = 0
Query:    1 MDLRGQFASERLFVALMWALTLLAALLTFAADDVRVMFGAFGGGLLLVSAICVPEWPCFNRHPLRFAAAS 70
            MD +GQ ++E L   L+ A  + A L+ +A  D ++M   + GG++L + + VP WP FNRHPL++  A+
Sbjct:    1 MDWQGQKSAEMLMQVLLVASAVAAFLVGYAMADFQLMLLVYAGGVVLTTLVTVPNWPFFNRHPLKWLDAA 70          
BLAST of Ggra626.t1 vs. uniprot
Match: W5CV46 (Uncharacterized protein n=4 Tax=Triticeae TaxID=147389 RepID=W5CV46_WHEAT)

HSP 1 Score: 57.8 bits (138), Expect = 3.160e-9
Identity = 27/70 (38.57%), Postives = 44/70 (62.86%), Query Frame = 0
Query:    1 MDLRGQFASERLFVALMWALTLLAALLTFAADDVRVMFGAFGGGLLLVSAICVPEWPCFNRHPLRFAAAS 70
            MD +GQ ++E L   L+ A  + A L+ +A  D ++M   + GG++L + + VP WP FNRHPL++  A+
Sbjct:    1 MDWQGQKSAEMLMQVLLVASAVAAFLVGYAMADFQLMLLVYAGGVVLTALVTVPNWPFFNRHPLKWLDAA 70          
BLAST of Ggra626.t1 vs. uniprot
Match: W4JVD2 (Signal peptidase complex subunit 1 n=1 Tax=Heterobasidion irregulare (strain TC 32-1) TaxID=747525 RepID=W4JVD2_HETIT)

HSP 1 Score: 57.4 bits (137), Expect = 3.370e-9
Identity = 26/65 (40.00%), Postives = 41/65 (63.08%), Query Frame = 0
Query:    2 DLRGQFASERLFVALMWALTLLAALLTFAADDVRVMFGAFGGGLLLVSAICVPEWPCFNRHPLRF 66
            D  GQ A ER+    + ALT ++ +L  A   +RV FG FG G+ ++  + VP+WP +N+HP+R+
Sbjct:   11 DFEGQRAVERISRNGLLALTAVSYVLGLALQSLRVTFGVFGLGIAVLLLVAVPQWPAYNKHPVRW 75          
BLAST of Ggra626.t1 vs. uniprot
Match: I1IIK6 (Uncharacterized protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=I1IIK6_BRADI)

HSP 1 Score: 57.0 bits (136), Expect = 6.350e-9
Identity = 26/66 (39.39%), Postives = 42/66 (63.64%), Query Frame = 0
Query:    1 MDLRGQFASERLFVALMWALTLLAALLTFAADDVRVMFGAFGGGLLLVSAICVPEWPCFNRHPLRF 66
            MD +GQ ++E L   L+ A  + A L+ +A  D ++M   + GG++L + + VP WP FNRHPL++
Sbjct:    1 MDWQGQKSAEMLMQVLLVASAVAAFLVGYAMADFQLMLLVYAGGVVLTALVTVPNWPFFNRHPLKW 66          
BLAST of Ggra626.t1 vs. uniprot
Match: A0A0E0RGS5 (Uncharacterized protein n=7 Tax=Oryzeae TaxID=147380 RepID=A0A0E0RGS5_ORYRU)

HSP 1 Score: 55.5 bits (132), Expect = 2.500e-8
Identity = 26/70 (37.14%), Postives = 43/70 (61.43%), Query Frame = 0
Query:    1 MDLRGQFASERLFVALMWALTLLAALLTFAADDVRVMFGAFGGGLLLVSAICVPEWPCFNRHPLRFAAAS 70
            MD +GQ  +E L   L+ A  + A ++ +A  D ++M   + GG++L + + VP WP FNRHPL++  A+
Sbjct:    1 MDWQGQKLAEMLMQLLLVASAVAAFVVGYAMADFQLMLLVYAGGVVLTALVTVPNWPFFNRHPLKWLDAA 70          
BLAST of Ggra626.t1 vs. uniprot
Match: E1Z250 (Uncharacterized protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z250_CHLVA)

HSP 1 Score: 54.7 bits (130), Expect = 2.920e-8
Identity = 23/66 (34.85%), Postives = 39/66 (59.09%), Query Frame = 0
Query:    1 MDLRGQFASERLFVALMWALTLLAALLTFAADDVRVMFGAFGGGLLLVSAICVPEWPCFNRHPLRF 66
            MD  GQ  +E L + ++   +++  +  +   D R M   FGGG+LL   + VP+WP +N+HP++F
Sbjct:    3 MDFAGQKLAETLAMFIVSLFSVIGFIYGYLQQDFRGMMSLFGGGVLLAFVVGVPDWPVYNKHPVKF 68          
BLAST of Ggra626.t1 vs. uniprot
Match: A0A0D3HU17 (Uncharacterized protein n=1 Tax=Oryza barthii TaxID=65489 RepID=A0A0D3HU17_9ORYZ)

HSP 1 Score: 55.5 bits (132), Expect = 2.990e-8
Identity = 26/70 (37.14%), Postives = 43/70 (61.43%), Query Frame = 0
Query:    1 MDLRGQFASERLFVALMWALTLLAALLTFAADDVRVMFGAFGGGLLLVSAICVPEWPCFNRHPLRFAAAS 70
            MD +GQ  +E L   L+ A  + A ++ +A  D ++M   + GG++L + + VP WP FNRHPL++  A+
Sbjct:    1 MDWQGQKLAEMLMQLLLVASAVAAFVVGYAMADFQLMLLVYAGGVVLTALVTVPNWPFFNRHPLKWLDAA 70          
The following BLAST results are available for this feature:
BLAST of Ggra626.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5E3WUA26.180e-1041.54Signal peptidase complex subunit 1 n=1 Tax=Penioph... [more]
A0A2P6V3032.450e-943.94Signal peptidase complex subunit 1 n=1 Tax=Micract... [more]
A0A446NUF42.750e-938.57Uncharacterized protein n=1 Tax=Triticum turgidum ... [more]
A0A3B6GYD43.160e-938.57Uncharacterized protein n=3 Tax=Triticinae TaxID=1... [more]
W5CV463.160e-938.57Uncharacterized protein n=4 Tax=Triticeae TaxID=14... [more]
W4JVD23.370e-940.00Signal peptidase complex subunit 1 n=1 Tax=Heterob... [more]
I1IIK66.350e-939.39Uncharacterized protein n=1 Tax=Brachypodium dista... [more]
A0A0E0RGS52.500e-837.14Uncharacterized protein n=7 Tax=Oryzeae TaxID=1473... [more]
E1Z2502.920e-834.85Uncharacterized protein (Fragment) n=1 Tax=Chlorel... [more]
A0A0D3HU172.990e-837.14Uncharacterized protein n=1 Tax=Oryza barthii TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009542Signal peptidase complex subunit Spc1/SPCS1PFAMPF06645SPC12coord: 1..69
e-value: 3.9E-17
score: 62.1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..36
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 57..73
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..56
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availableTMHMMTMhelixcoord: 12..31
NoneNo IPR availableTMHMMTMhelixcoord: 36..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000895_piloncontigtig00000895_pilon:136550..136982 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra626.t1Ggra626.t1Gracilaria gracilis GNS1m malemRNAtig00000895_pilon 136550..136982 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra626.t1 ID=Ggra626.t1|Name=Ggra626.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=74bp
MDLRGQFASERLFVALMWALTLLAALLTFAADDVRVMFGAFGGGLLLVSA
ICVPEWPCFNRHPLRFAAASAPP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009542Spc1/SPCS1