Ggra6241.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6241.t1
Unique NameGgra6241.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length559
Homology
BLAST of Ggra6241.t1 vs. uniprot
Match: A0A2V3J403 (Exosome complex exonuclease RRP44 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J403_9FLOR)

HSP 1 Score: 644 bits (1661), Expect = 3.900e-220
Identity = 307/379 (81.00%), Postives = 349/379 (92.08%), Query Frame = 0
Query:  176 PERKAKAGIRGKRYYQGTHHPSTYDVTEATVTVCLEPKDKSKRTQVLIVGRENRNRSIDGDVVVLELLPKSKWQFPSNLAIDQDEADVESDSEDTDVRVPDSRPHKQRPAVQGREPRPTGRVVAIAQRNWRPYCGTISEKSLRGGDTALCIPMDRNVPKIRVRSRRIPQLLGKRVLIIIDKWDRTSIHPSGHIVREIGPSEEKEAETEVILIENGIPTRKFSDAAMACLPNESWKVTEEHCKTQWDLREMTICIVDPPGCTGIDDALHFRRVGADEVEVGVHIAEVTAFVGHGTVLDNEAAERGCTVYVVDRRIEMLPGLLSGNFCSLRGGEERLSFSVLIRMDNEGNVKQREFGRSVIKSKAALTYEMAQNRIDDARK 554
            PERKAKAGIR +RY+QGT+HPS YDVTEATVTVCLEPK+KSKRTQVLIVGREN+NRSIDGDVVV+ELLPKS+W+FPSNLA+DQ+ AD++SDSE+ +V +  SR   ++     R+P PTGRVVAIAQRNWRPYC TISEKSL+GG+TALC+P+DR+VPKIRVRSRRI QL+GKRVLIIIDKWDRTSIHPSGHI+REIGPSE+KEAETEVILIENGIPTRKFSDAAM CLP ESW+VTEEHCKT+WDLRE+TIC VDPPGCT IDDALHFRR+  DEVEVGVHIA+VTAFVGHG+ LD EA+ERGCTVY+VDRRIEMLP LLSGNFCSL+GGEERL+FS ++RM+N GN+K+ EFGRSVIKSKAALTYEMAQNRID+ARK
Sbjct:  236 PERKAKAGIRARRYFQGTYHPSAYDVTEATVTVCLEPKNKSKRTQVLIVGRENQNRSIDGDVVVIELLPKSEWRFPSNLAVDQEAADIDSDSEEAEVTLSGSRAKSEKLKAADRDPSPTGRVVAIAQRNWRPYCATISEKSLKGGETALCVPIDRSVPKIRVRSRRISQLIGKRVLIIIDKWDRTSIHPSGHIIREIGPSEDKEAETEVILIENGIPTRKFSDAAMGCLPVESWRVTEEHCKTRWDLRELTICSVDPPGCTDIDDALHFRRINTDEVEVGVHIADVTAFVGHGSALDQEASERGCTVYLVDRRIEMLPSLLSGNFCSLQGGEERLAFSAILRMNNNGNIKRSEFGRSVIKSKAALTYEMAQNRIDEARK 614          
BLAST of Ggra6241.t1 vs. uniprot
Match: R7Q4R9 (RNB domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4R9_CHOCR)

HSP 1 Score: 574 bits (1480), Expect = 1.940e-190
Identity = 275/379 (72.56%), Postives = 327/379 (86.28%), Query Frame = 0
Query:  176 PERKAKAGIRGKRYYQGTHHPSTYDVTEATVTVCLEPKDKSKRTQVLIVGRENRNRSIDGDVVVLELLPKSKWQFPSNLAIDQDEADVESDSEDTDVRVPDSRPHKQRPAVQGREPRPTGRVVAIAQRNWRPYCGTISEKSLRGGDTALCIPMDRNVPKIRVRSRRIPQLLGKRVLIIIDKWDRTSIHPSGHIVREIGPSEEKEAETEVILIENGIPTRKFSDAAMACLPNESWKVTEEHCKTQWDLREMTICIVDPPGCTGIDDALHFRRVGADEVEVGVHIAEVTAFVGHGTVLDNEAAERGCTVYVVDRRIEMLPGLLSGNFCSLRGGEERLSFSVLIRMDNEGNVKQREFGRSVIKSKAALTYEMAQNRIDDARK 554
            PERKAKAG++  RYYQGT HPS YDVTEA VTVCL+PKDK+KRTQVL+ GREN+NRSI+GD+VV+ LLPKS+W  PSNLAI  ++ADV+SD+E++++ V  S         + +E +PTG+V+AIAQR+WRPYCGT+SE+S +GG++AL +P+ R VPK+RVRSRR+ + +GKRVL+I+DKWDR S+HPSGHI+REIG S +KEAETEVILIENGIPTRKFSDAAM CLP+E+WKVTEEH K++WDLR+ TIC VDPPGCT IDDALHFRR+  +EVE+GVHIA+VTAFV H   LD EAAERGCTVY+VDRRIEMLP LLSGNFCSLRGGEERL+FS LIRMDN+GNVKQ EFGRSVIKS AALTYE AQNRID ARK
Sbjct:  235 PERKAKAGVKAGRYYQGTFHPSPYDVTEAHVTVCLDPKDKTKRTQVLVKGRENQNRSIEGDIVVIALLPKSEWSIPSNLAIGIEDADVDSDAEESEIDVATSSKTTDTEGPK-KEAKPTGKVIAIAQRSWRPYCGTVSEQSYKGGESALFVPIARGVPKVRVRSRRVKEFIGKRVLLIVDKWDRNSLHPSGHIIREIGSSGDKEAETEVILIENGIPTRKFSDAAMGCLPDETWKVTEEHVKSRWDLRDWTICSVDPPGCTDIDDALHFRRISDEEVEIGVHIADVTAFVSHDCALDKEAAERGCTVYLVDRRIEMLPSLLSGNFCSLRGGEERLAFSALIRMDNDGNVKQVEFGRSVIKSSAALTYEAAQNRIDAARK 612          
BLAST of Ggra6241.t1 vs. uniprot
Match: A0A7S0ZKV3 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZKV3_9RHOD)

HSP 1 Score: 365 bits (938), Expect = 9.370e-113
Identity = 201/415 (48.43%), Postives = 273/415 (65.78%), Query Frame = 0
Query:  150 KDIESVIEIWNDGIVSQVQTDSARKFPERKAKAGIRGKRYYQGTHHPSTYDVTEATVTVCLEPKDKSKRTQVLIVGRENRNRSIDGDVVVLELLPKSKWQFPSNLAIDQDEADVESDSEDTDVRVPDSRPHKQRPAVQ-GREPRPTGRVVAIAQRNWRPYCGTISEKSL-RGGDTALCIPMDRNVPKIRVRSRRIPQLLGKRVLIIIDKWDRTSIHPSGHIVREIGPSEEKEAETEVILIENGIPTRKFSDAAMACLPNESWKVTEEHCKTQWDLREMTICIVDPPGCTGIDDALHFRRV--------GADEVEVGVHIAEVTAFVGHGTVLDNEAAERGCTVYVVDRRIEMLPGLLSGNFCSLRGGEERLSFSVLIRMDNEGNVKQREFGRSVIKSKAALTYEMAQNRIDDARK 554
            +D E +++    G   + +T  A  + E + K         +G    S ++  EATV        +S    VLIVG+E+ NR++DGD V +E+L + +WQ  S L I +D+++ + +S+ + V+ P +       A+    +  PTGRVV I +RNWRP+CG +   S+  G D A+ +P+DR  P+IR+RSRR+ +LLG+R+L++ D W R+S  P+GH+VRE+G S +KE ETEVIL+EN IPTR FS AA+ACLP+ESW V E H   +WDLR   +C VDPPGCT IDDALH  +V        G   +EVGVHIA+VTAF+ HG+ LD EAA+RG +VY+VDRRIEMLP  L+ + CSLRG  ERL+FSV+ +MD + NV   EFGRSVIKS AALTYE AQ+RID ARK
Sbjct:  170 EDDEVLVDSEGSGKSRKKRTIYAEHWTESRVKEEKSKGNVVEGVLRVSGFNFEEATV--------RSDEKSVLIVGKESLNRALDGDRVAVEVLSEDQWQAQS-LKIVEDDSEEKQNSK-SKVKAPAA---SMDTAIDLHTQLMPTGRVVCILKRNWRPFCGALQVSSVVEGSDRAIFVPVDRLAPRIRIRSRRVSELLGRRLLVVADSWPRSSTLPNGHVVRELGISGDKETETEVILLENNIPTRAFSAAALACLPDESWAVNETHVSRRWDLRNRPVCSVDPPGCTDIDDALHCMKVPDTRGEFRGKTVLEVGVHIADVTAFLQHGSALDVEAAQRGTSVYLVDRRIEMLPSRLTSDLCSLRGEVERLAFSVVFKMDEDANVLSTEFGRSVIKSNAALTYEQAQDRIDAARK 571          
BLAST of Ggra6241.t1 vs. uniprot
Match: A0A5J4YWD1 (Exosome complex exonuclease RRP44 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YWD1_PORPP)

HSP 1 Score: 356 bits (913), Expect = 7.090e-112
Identity = 190/390 (48.72%), Postives = 257/390 (65.90%), Query Frame = 0
Query:  168 QTDSARKFPERKAKAGIRGKRYYQGTHHPSTYDVTEATVTVCLEPKDK-SKRTQVLIVGRENRNRSIDGDVVVLELLPKSKWQFPSNLAIDQDEA-DVESDSEDTDVRVPDSRPHKQRPAVQGREPRPTGRVVAIAQRNWRPYCGTISEKSLRGGDTALCIPMDRNVPKIRVRSRRIPQLLGKRVLIIIDKWDRTSIHPSGHIVREIGPSEEKEAETEVILIENGIPTRKFSDAAMACLPN-ESWKVTEEHCKTQWDLREMTICIVDPPGCTGIDDALHFRRVGADE-VEVGVHIAEVTAFVGHGTVLDNEAAERGCTVYVVDRRIEMLPGLLSGNFCSLRGGEERLSFSVLIRMDNEGNVKQREFGRSVIKSKAALTYEMAQNRIDDAR 553
            +T SA    E  A  G++  RY +GT   S Y++ EA+V++ L  K     RT ++++G+ + NR+ DGD VV+ELL +S+W+  S+  ++Q+ A D E D  DT+        H Q      ++  P+GRVV ++QR W+   G++ + S  GG  AL +P DR +P +RV S RI  L  KR+++ +D W R S +PSGH+V+EIG S +K AETEVILIE+ +P RKFS AA+ CLP+ E+W V+EEH   +WDL+   I  VDPPGCT IDDALH   +   E  EVG+HIA+VTAFV HG+ LD EAAERG TVY+V RR EMLP +L+ N CSL GG ERL+FSV++ MD + NV   EFGRS IKS+ A+TYE AQN +D  R
Sbjct:  187 RTHSAEHISELVALEGLQSGRYVEGTFRSSPYNLLEASVSIALHKKSNPDDRTTIMLIGKSSHNRAFDGDRVVIELLDRSEWKTVSDRIVEQEAAQDKEGDDGDTN-----GISHDQ----VRKDATPSGRVVRVSQRKWQSCSGSLQQSSHSGGGNALFVPADRKIPLVRVLSARIRNLFEKRLIVAVDSWSRFSANPSGHVVQEIGSSGDKNAETEVILIESSVPHRKFSKAALDCLPDGENWAVSEEHIHKRWDLKCKPIASVDPPGCTDIDDALHCVSLPDGEGYEVGIHIADVTAFVQHGSALDMEAAERGTTVYLVGRRFEMLPAMLTSNLCSLVGGVERLAFSVILVMDKDANVLSAEFGRSAIKSRRAMTYEQAQNMLDGIR 567          
BLAST of Ggra6241.t1 vs. uniprot
Match: A0A5J4YMC6 (Exosome complex exonuclease RRP44-like A n=2 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YMC6_PORPP)

HSP 1 Score: 359 bits (922), Expect = 1.040e-110
Identity = 192/386 (49.74%), Postives = 256/386 (66.32%), Query Frame = 0
Query:  172 ARKFPERKAKAGIRGKRYYQGTHHPSTYDVTEATVTVCLEPKDK-SKRTQVLIVGRENRNRSIDGDVVVLELLPKSKWQFPSNLAIDQDEA-DVESDSEDTDVRVPDSRPHKQRPAVQGREPRPTGRVVAIAQRNWRPYCGTISEKSLRGGDTALCIPMDRNVPKIRVRSRRIPQLLGKRVLIIIDKWDRTSIHPSGHIVREIGPSEEKEAETEVILIENGIPTRKFSDAAMACLPN-ESWKVTEEHCKTQWDLREMTICIVDPPGCTGIDDALHFRRVGADE-VEVGVHIAEVTAFVGHGTVLDNEAAERGCTVYVVDRRIEMLPGLLSGNFCSLRGGEERLSFSVLIRMDNEGNVKQREFGRSVIKSKAALTYEMAQNRIDDAR 553
            A    E  A  G++  RY +GT   S Y++ EA+V+V L  K     RT ++++G+ + NR+ DGD VV+ELL +S+W+  S+  ++Q+ A D ESD  DT+        H Q      ++  P+GRVV ++QR W+   G++ + S  GG  AL +P DR +P +RV S RI  L  KR+++ +D W R S +PSGH+V+EIG S +K AETEVILIE+ +P RKFS AA+ CLP+ E W V+EEH   +WDL+   I  VDPP CT IDDALH   +   E  EVG+HIA+VTAFV HG+ LD EAAERG TVY+VDRR EMLP +L+ NFCSL GG ERL+FSV++ MD + NV   EFGRSVIKS+ A+TYE AQN +D  R
Sbjct:  231 AEHISELAALEGLQSGRYVEGTFRSSPYNLLEASVSVALHKKSNPDDRTTIMLIGKSSHNRAFDGDRVVIELLDRSEWKTVSDRIVEQEAAQDKESDDGDTN-----GISHDQ----VRKDATPSGRVVRVSQRKWQSCSGSLQQSSHSGGGNALFVPADRKIPLVRVLSARIRNLFEKRLIVAVDSWSRFSANPSGHVVQEIGSSGDKNAETEVILIESSVPHRKFSKAALDCLPDGEKWAVSEEHIHKRWDLKSKPIASVDPPECTDIDDALHCVSLPDGEGYEVGIHIADVTAFVQHGSALDMEAAERGTTVYLVDRRFEMLPAMLTSNFCSLVGGVERLAFSVILVMDKDANVLSAEFGRSVIKSRRAMTYEQAQNMLDGIR 607          
BLAST of Ggra6241.t1 vs. uniprot
Match: A0A1X6P2U4 (RNB domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P2U4_PORUM)

HSP 1 Score: 347 bits (890), Expect = 2.770e-104
Identity = 204/436 (46.79%), Postives = 262/436 (60.09%), Query Frame = 0
Query:  178 RKAKAGIRGKRYYQGTHHPSTYDVTEATVTVCLE---PKDKSKRTQVLIVGRENRNRSIDGDVVVLELLPKSKWQFPSNLAIDQDEADV------ESDSEDTDVRV-----------------------PDS-RPHKQR-------------------------PAVQGREPRPTGRVVAIAQRNWRPYCGTI-SEKSLRGGDTALCIPMDRNVPKIRVRSRRIPQLLGKRVLIIIDKWDRTSIHPSGHIVREIGPSEEKEAETEVILIENGIPTRKFSDAAMACLPNESWKVTEEHCKTQWDLREMTICIVDPPGCTGIDDALHFRRVGADEVEVGVHIAEVTAFVGHGTVLDNEAAERGCTVYVVDRRIEMLPGLLSGNFCSLRGGEERLSFSVLIRMDNE-GNVKQREFGRSVIKSKAALTYEMAQNRIDDAR 553
            +  +AG+R  R + GT+  + YDV E TV V L          RT+VLI GR   NR++DGD VV+ELLP+SKW   S+ A+++  A        E D+ D +                          P++ RP K++                         PA       P  +VVAIA+RNWRPYCG++ S  S   GD  L IP++R +P++RVRSRR+ +L+G+R+L+I+D W RTS  PSGH+VRE+G +   EAET  IL+E  I T  FS AA+A LP   W VT +H + +WDLR++ I  VDPPGCT IDDALH+R VG  +VEVGVHIA+VTAFV  G+ LD EA  RG TVY+VDRRIEMLPG+LSGN CSL G  +RL+FS L+ +D   G V    FGRSVI SKA+LTYE AQ RID AR
Sbjct:  291 KAVRAGVRAGRLHVGTYRVAEYDVREGTVAVDLSGVGAAGTGDRTEVLIRGRAAGNRAVDGDSVVIELLPRSKWGGRSSRAVEEVGAGTGVGAEGEVDTLDDEXXXXXXXXXXXXAPSANGKKSKAASPPETGRPAKRKATPAAVAGTPPAXXXXXXXXXXAVPPAADAAPALPCAKVVAIARRNWRPYCGSLASTTSAADGDRGLFIPVNRKLPRVRVRSRRLLELVGQRLLLIMDAWPRTSSLPSGHVVRELGTAGGLEAETATILLEQEINTAPFSAAALATLPPAGWTVTADHVRGRWDLRDVPIASVDPPGCTDIDDALHYREVGGGKVEVGVHIADVTAFVSPGSALDVEAGARGTTVYLVDRRIEMLPGVLSGNLCSLMGNVDRLAFSALLTLDAATGRVVDAVFGRSVIHSKASLTYEAAQRRIDAAR 726          
BLAST of Ggra6241.t1 vs. uniprot
Match: A0A1W0WLT7 (Exosome complex exonuclease RRP44 n=1 Tax=Hypsibius dujardini TaxID=232323 RepID=A0A1W0WLT7_HYPDU)

HSP 1 Score: 333 bits (853), Expect = 8.380e-100
Identity = 173/380 (45.53%), Postives = 242/380 (63.68%), Query Frame = 0
Query:  181 KAGIRGKRYYQGTHHPSTYDVTEATVTVCLEPKDKSKRTQVLIVGRENRNRSIDGDVVVLELLPKSKWQFPSNLAIDQD--------EADVESDSEDTDVRVPDSRPHKQRPAVQGREPRPTGRVVAIAQRNWRPYCGTISEKSLRGGDTALCIPMDRNVPKIRVRSRRIPQLLGKRVLIIIDKWDRTSIHPSGHIVREIGPSEEKEAETEVILIENGIPTRKFSDAAMACLPNESWKVTEEHCKTQWDLREMTICIVDPPGCTGIDDALHFRRVGADEVEVGVHIAEVTAFVGHGTVLDNEAAERGCTVYVVDRRIEMLPGLLSGNFCSLRGGEERLSFSVLIRMDNEGNVKQREFGRSVIKSKAALTYEMAQNRIDDA 552
            +AG++  +Y+QG  H S  +  EATV+V  E  DKS    VLI G  + NR+++ D+V +E+ P+ KW  PSNL ++++        EA  E+       ++ D    K +  V  ++ +PTG+VV I +RNWR YCG +  K+ +     + +P DR +P +RV +++   L GKR+++ ID+W R+S  P GH V+ +G   +K AE EV+L+E+ +   KFSDA +ACLP   W +T+E  K + D R + IC VDPPGCT IDDALH+R +    +EVGVHIA+VT FV  G  +D EAA RG TVY+VD+RI+MLPGLLSGN CSLRGGEERL+ S +  M     +    F +SVI+S+AALTY  AQ RIDDA
Sbjct:  236 QAGLKSAKYFQGKFHASRENYLEATVSV--EGLDKS----VLIQGHVSLNRAVNEDIVAIEIFPEDKWSAPSNLVLEEEPDVDAASGEASEENXXXXKSRQLKDDMEKKMQQKVAKKDKQPTGKVVGIIKRNWRTYCGVLRPKTSKTSTRYVFVPADRKIPLVRVETQQGDLLQGKRIVVAIDEWPRSSKLPIGHYVKRLGEVGDKNAENEVLLLEHDVQHDKFSDAVLACLPTMPWILTDEEVKKRTDFRHLAICSVDPPGCTDIDDALHYRVLPNGNIEVGVHIADVTHFVRPGNAMDQEAASRGTTVYLVDQRIDMLPGLLSGNLCSLRGGEERLAMSSVWEMTQTAEILNVTFSKSVIRSRAALTYGEAQMRIDDA 609          
BLAST of Ggra6241.t1 vs. uniprot
Match: A0A084WKT9 (AGAP005191-PA-like protein n=2 Tax=Anopheles TaxID=44482 RepID=A0A084WKT9_ANOSI)

HSP 1 Score: 331 bits (848), Expect = 8.170e-99
Identity = 171/371 (46.09%), Postives = 237/371 (63.88%), Query Frame = 0
Query:  183 GIRGKRYYQGTHHPSTYDVTEATVTVCLEPKDKSKRTQVLIVGRENRNRSIDGDVVVLELLPKSKWQFPSNLAIDQDEADVESDSEDTDVRVPDSRPHKQRPAVQGREPRPTGRVVAIAQRNWRPYCGTISEKSLRGGDTALCIPMDRNVPKIRVRSRRIPQLLGKRVLIIIDKWDRTSIHPSGHIVREIGPSEEKEAETEVILIENGIPTRKFSDAAMACLPNESWKVTEEHCKTQWDLREMTICIVDPPGCTGIDDALHFRRVGADEVEVGVHIAEVTAFVGHGTVLDNEAAERGCTVYVVDRRIEMLPGLLSGNFCSLRGGEERLSFSVLIRMDNEGNVKQREFGRSVIKSKAALTYEMAQNRIDDAR 553
            GI+     QG    S  +  E  V V      +     VLI GR N NR++DGDVV +E+LP+S+W+ PS++ +      V+  ++  D+  PD   +++  A    E  PTGRVV I +R WR YCG +    ++G    + +P +R +P+IR+ +R+   LL +R+++ ID+W R S +P GH VR +GP   KE E EVIL+E+ +P  +FS+  +ACLP   W +TEE  K + DLRE+TIC VDPPGCT IDDALH RR+    +EVGVHIA+V+ F+  G  +D EAA R  TVY+VD RI+M+P LLS N CSLRGGEER +FS +  +D+E  +K  +F +SVIKSK+ALTYE AQ  IDDA+
Sbjct:  240 GIKNATLMQGAFLASRENFLEGYVRV------EGVEKPVLIQGRMNLNRAVDGDVVAIEMLPESEWKAPSDVVL------VDEQNDPGDMIEPDPTFNEKAQA----EREPTGRVVGIIKRKWRQYCGILLPSHIQGSTRHIFVPAERKIPRIRIETRQAATLLSQRIIVAIDQWPRHSRYPQGHFVRALGPIGSKETENEVILLEHDVPHARFSEDVLACLPQLPWVITEEDLKRRVDLRELTICSVDPPGCTDIDDALHARRLPNGNIEVGVHIADVSHFIRPGNAMDREAASRATTVYLVDNRIDMVPELLSSNLCSLRGGEERFAFSCVWELDDEAQIKHVKFHKSVIKSKSALTYEQAQLIIDDAK 594          
BLAST of Ggra6241.t1 vs. uniprot
Match: A0A210PZ84 (Exosome complex exonuclease RRP44 n=2 Tax=Pectinidae TaxID=6566 RepID=A0A210PZ84_MIZYE)

HSP 1 Score: 326 bits (835), Expect = 2.620e-97
Identity = 175/462 (37.88%), Postives = 271/462 (58.66%), Query Frame = 0
Query:   94 VGDNVSANPDDGRSSGFQNSPLSKAVNTRQCDDLRRGGNASSSKSIPIKPFVPALPKDIESVIEIWNDGIVSQVQTDSARKFPER----KAKAGIRGKRYYQGTHHPSTYDVTEATVTVCLEPKDKSKRTQVLIVGRENRNRSIDGDVVVLELLPKSKWQFPSNLAIDQDEADVESDSEDTDVRVPDSRPHKQRPAVQGREPRPTGRVVAIAQRNWRPYCGTISEKSLRGGDTALCIPMDRNVPKIRVRSRRIPQLLGKRVLIIIDKWDRTSIHPSGHIVREIGPSEEKEAETEVILIENGIPTRKFSDAAMACLPNESWKVTEEHCKTQWDLREMTICIVDPPGCTGIDDALHFRRVGADEVEVGVHIAEVTAFVGHGTVLDNEAAERGCTVYVVDRRIEMLPGLLSGNFCSLRGGEERLSFSVLIRMDNEGNVKQREFGRSVIKSKAALTYEMAQNRIDD 551
            + +  S   D  RS G  +  +   + T   D+ RR       K+  +  +V +L ++   ++++ +   +S V +     FPE     + + GI+  RY+QG+   S  +  EA V+V       +K   V I G  N+NR++  DVV +E+LP+ +W  PS++ +++    +  DS +T+          +R  +     +PTGR+V I +RNWR YCG +   +++ G   + +P ++ +PKIR+ +R+   L+ +R+++ ID W R S +P GH VR++G   +K+ E EV+L+E+ +P   FS+A +ACLP   W +T+E  K + DLR + IC VDPPGCT IDDALH R +    +E+GVHIA+V+ F+  GT +D EAAERG TVY+ DRRI+M+P LLS N CSLR   ER +FS+L  M ++ +V    F +SVIKSKAA TY  AQ +IDD
Sbjct:  148 IREATSWYQDHLRSEGQSDLIIDVVLLTNDADN-RRKAIQQGLKAFTVHEYVKSL-ENCGHLVDLLSQSQMS-VHSQDRLMFPEHLPLSEIQRGIKAGRYFQGSFMASRENYLEANVSV------HNKDEMVFIQGHMNQNRAVHSDVVAIEMLPEEEWSCPSSMVLEESSEKIVEDSMETEDEA------IKRKKIPKELRQPTGRIVGIIKRNWRQYCGILRPSAVKEGTRHIVVPAEKKIPKIRIETRQAADLITQRIVVAIDNWPRNSRYPQGHFVRKLGNIGDKDTENEVLLLEHDVPHSNFSEAVLACLPKLPWIITDEDYKRRRDLRHIDICSVDPPGCTDIDDALHCRELENGNLEIGVHIADVSHFIRPGTAIDKEAAERGTTVYLTDRRIDMVPELLSSNLCSLRSNVERFAFSILWEMTHDADVVGTSFTKSVIKSKAAFTYAEAQMKIDD 594          
BLAST of Ggra6241.t1 vs. uniprot
Match: A0A6J2J8Q6 (exosome complex exonuclease RRP44 n=2 Tax=Bombyx TaxID=7090 RepID=A0A6J2J8Q6_BOMMA)

HSP 1 Score: 326 bits (836), Expect = 2.870e-97
Identity = 166/374 (44.39%), Postives = 233/374 (62.30%), Query Frame = 0
Query:  183 GIRGKRYYQGTHHPSTYDVTEATVTVCLEPKDKSKRTQVLIVGRENRNRSIDGDVVVLELLPKSKWQFPSNLAIDQDEADVESDSEDTDVRVPDSRPHKQRPAVQGREPRPTGRVVAIAQRNWRPYCGTISEKSLRGGDTALCIPMDRNVPKIRVRSRRIPQLLGKRVLIIIDKWDRTSIHPSGHIVREIGPSEEKEAETEVILIENGIPTRKFSDAAMACLPNESWKVTEEHCKTQWDLREMTICIVDPPGCTGIDDALHFRRVGADE----VEVGVHIAEVTAFVGHGTVLDNEAAERGCTVYVVDRRIEMLPGLLSGNFCSLRGGEERLSFSVLIRMDNEGNVKQREFGRSVIKSKAALTYEMAQNRIDDA 552
            GIR  + YQGT+H S  +  E   +V            +L+ G    NR+IDGD+V +E+ PK +W+ PSN+ ++    D E+  E+  V +  ++P      +      PTG+VV I +R WR YCG +      G    L  P ++ +P++R+ +R+   L  +R+L+ +D W R S +P GH+VR +GP  +K+AE EVIL+E+ +P  +FS+A + CLP   W + EE  + + DLR++ +C VDPPGCT IDDALH RR+G+ +     EVGVHIA+VT FV   T LD EAA R  TVY+VDRRI+M+P LLS N CSLRGGEERL+FS +  MD   NV   +F +S+IKSKAA+TYE AQ  IDD+
Sbjct:  238 GIRCGQLYQGTYHASRENFLEGNASV------NGFEKSILLQGHIGINRAIDGDIVAIEIFPKEEWRKPSNIVLEDKTEDPENILEEETVLLDAAKPVDNDDEIT-----PTGKVVGIIRRKWRQYCGILMPSKFHGATRHLFTPAEKRIPRVRIETRQSEILASQRILVALDSWPRNSRYPLGHLVRALGPIGDKDAENEVILLEHDVPHARFSEAVLNCLPPNDWTIPEEERQKRVDLRDVCVCSVDPPGCTDIDDALHARRLGSSDGLATYEVGVHIADVTYFVKPDTALDKEAASRSTTVYLVDRRIDMVPELLSSNLCSLRGGEERLAFSCVWEMDENANVLSTKFHKSIIKSKAAMTYEEAQIAIDDS 600          
The following BLAST results are available for this feature:
BLAST of Ggra6241.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4033.900e-22081.00Exosome complex exonuclease RRP44 n=1 Tax=Gracilar... [more]
R7Q4R91.940e-19072.56RNB domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A7S0ZKV39.370e-11348.43Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4YWD17.090e-11248.72Exosome complex exonuclease RRP44 n=1 Tax=Porphyri... [more]
A0A5J4YMC61.040e-11049.74Exosome complex exonuclease RRP44-like A n=2 Tax=P... [more]
A0A1X6P2U42.770e-10446.79RNB domain-containing protein n=1 Tax=Porphyra umb... [more]
A0A1W0WLT78.380e-10045.53Exosome complex exonuclease RRP44 n=1 Tax=Hypsibiu... [more]
A0A084WKT98.170e-9946.09AGAP005191-PA-like protein n=2 Tax=Anopheles TaxID... [more]
A0A210PZ842.620e-9737.88Exosome complex exonuclease RRP44 n=2 Tax=Pectinid... [more]
A0A6J2J8Q62.870e-9744.39exosome complex exonuclease RRP44 n=2 Tax=Bombyx T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001900Ribonuclease II/RSMARTSM00955RNB_2coord: 419..558
e-value: 3.1E-8
score: -9.6
IPR001900Ribonuclease II/RPFAMPF00773RNBcoord: 421..554
e-value: 1.1E-37
score: 130.1
IPR033771Rrp44-like cold shock domainPFAMPF17216Rrp44_CSD1coord: 181..267
e-value: 4.8E-12
score: 45.8
NoneNo IPR availableGENE3D2.40.50.700coord: 305..376
e-value: 2.1E-22
score: 80.7
NoneNo IPR availableGENE3D2.40.50.690coord: 173..304
e-value: 3.2E-19
score: 70.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..294
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 268..287
NoneNo IPR availablePANTHERPTHR23355:SF35EXOSOME COMPLEX EXONUCLEASE RRP44coord: 175..555
NoneNo IPR availablePANTHERPTHR23355RIBONUCLEASEcoord: 175..555
IPR041505Dis3-like cold-shock domain 2PFAMPF17849OB_Dis3coord: 323..390
e-value: 4.1E-16
score: 58.7
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 176..370
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 346..553

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000879_piloncontigtig00000879_pilon:126702..130621 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6241.t1Ggra6241.t1Gracilaria gracilis GNS1m malemRNAtig00000879_pilon 126702..130621 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6241.t1 ID=Ggra6241.t1|Name=Ggra6241.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=559bp
MERRGTSTATQGGGTGSGFVVPLQIKNERANGKKMVSDILNSAREWVAKR
ELSLEENEHLENRYSHDEVHFRLLKRRLEQILERRKQAFRSCIVGDNVSA
NPDDGRSSGFQNSPLSKAVNTRQCDDLRRGGNASSSKSIPIKPFVPALPK
DIESVIEIWNDGIVSQVQTDSARKFPERKAKAGIRGKRYYQGTHHPSTYD
VTEATVTVCLEPKDKSKRTQVLIVGRENRNRSIDGDVVVLELLPKSKWQF
PSNLAIDQDEADVESDSEDTDVRVPDSRPHKQRPAVQGREPRPTGRVVAI
AQRNWRPYCGTISEKSLRGGDTALCIPMDRNVPKIRVRSRRIPQLLGKRV
LIIIDKWDRTSIHPSGHIVREIGPSEEKEAETEVILIENGIPTRKFSDAA
MACLPNESWKVTEEHCKTQWDLREMTICIVDPPGCTGIDDALHFRRVGAD
EVEVGVHIAEVTAFVGHGTVLDNEAAERGCTVYVVDRRIEMLPGLLSGNF
CSLRGGEERLSFSVLIRMDNEGNVKQREFGRSVIKSKAALTYEMAQNRID
DARKMTQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001900RNase_II/R
IPR033771Rrp44_CSD1
IPR041505Dis3_CSD2
IPR012340NA-bd_OB-fold