Ggra6226.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6226.t1
Unique NameGgra6226.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length401
Homology
BLAST of Ggra6226.t1 vs. uniprot
Match: A0A2V3J4E1 (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4E1_9FLOR)

HSP 1 Score: 84.3 bits (207), Expect = 6.060e-14
Identity = 49/132 (37.12%), Postives = 67/132 (50.76%), Query Frame = 0
Query:   42 HPNYPGQGSASSSQHPHPIHATAPLPTVEAVPSDNVDVWNSAQAVPLYANSAGWVSKGSLAVRDPLRDGDAFCRAPWFHPQAVNDTALLESYVENGVLPGGLPLAVVTSNDWKVLVAIAPMLLRYDPRKNVE 173
            HP   GQG++SS + P        LPT+                        GW + GSL  R+P R G  F +APWF P+AV DT L++S+  +G LPGGLP+AV  S DW+  +A++P  L + PR    
Sbjct:   73 HPGSAGQGTSSSGRAPAWDWRQVELPTL-----------------------GGWPTPGSLHSRNPHRHGAEFAKAPWFDPEAVRDTELVDSFAVDGYLPGGLPVAVTHSWDWRTRIAVSPSCL-FVPRNETR 180          
BLAST of Ggra6226.t1 vs. uniprot
Match: A0A2V3IHU9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHU9_9FLOR)

HSP 1 Score: 76.6 bits (187), Expect = 4.840e-12
Identity = 39/87 (44.83%), Postives = 53/87 (60.92%), Query Frame = 0
Query:  169 RKNVEDVRHIIDVMDLVNWDLVPWANRNKGSRNRW-DRSPGRRHNTAGDFVCYDPWEGTLTTPVYAQWAQRQPTVLLAGHPTGFVFS 254
            R N ED RH+++VMD +NWDLVP     +G+R+R  + SPGR  + AGDFV YDPW     T   A + ++ P    A  PTG++F 
Sbjct:  104 RANQEDFRHLMNVMDQINWDLVPADQAARGNRSRQREYSPGRTAD-AGDFVWYDPWTRQHLTSEQAPYLRQNPRAQPATQPTGYIFE 189          
BLAST of Ggra6226.t1 vs. uniprot
Match: A0A2V3ILM9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILM9_9FLOR)

HSP 1 Score: 70.1 bits (170), Expect = 9.040e-11
Identity = 40/106 (37.74%), Postives = 52/106 (49.06%), Query Frame = 0
Query:  171 NVEDVRHIIDVMDLVNWDLVPWANRNKGSRN-RWDRSPGRRHNTAGDFVCYDPWEGTLTTPVYAQWAQRQPTVLLAGHPTGFVF------SDNWVPPVDLDDPTVD 269
            N  D  H++DVMD VNWDLVP  +R +GS     D SPGR  N  GDF+ YDPW     T   A+  ++    +       +VF      SD +      DDP +D
Sbjct:   10 NQADFHHLLDVMDQVNWDLVPNEHRARGSLALSADHSPGRNSNQGGDFIWYDPWTREHVTTEAAKHLRQNRRAMQTTQTVSYVFEPQLAKSDAFDDEEGYDDPVID 115          
BLAST of Ggra6226.t1 vs. uniprot
Match: A0A2V3IQ48 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ48_9FLOR)

HSP 1 Score: 60.5 bits (145), Expect = 3.370e-7
Identity = 45/141 (31.91%), Postives = 72/141 (51.06%), Query Frame = 0
Query:  169 RKNVEDVRHIIDVMDLVNWDLVPWANRNKGSRNRW-DRSPGRRHNTAGDFVCYDPWEGTLTTPVYAQWAQRQPTVLLAGHPTGFVFSDNWVPPVDLDDPTVDVEVMEDEANAVG-GVNRETVLLP-EGNQVTHTVGGVSQA 306
            R N E+   ++D++D VNW+LVP    ++  RN   D SPGR +   GDF+ YDPW    T    A+  ++ P  +    PTG++F      P+ ++   + V   ED  N V  G  +E +  P +GN+V  T   + ++
Sbjct:   38 RANQEEFCRLLDIIDQVNWNLVPEEQISR--RNPCIDHSPGR-NGPGGDFIWYDPWTCQHTDGRQAKHLRKNPRAIPPTQPTGYLFE-----PMPVNSDAL-VHEYEDIINDVPMGEPKEELDAPNDGNEVEPTPAAIQES 169          
The following BLAST results are available for this feature:
BLAST of Ggra6226.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J4E16.060e-1437.12Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A2V3IHU94.840e-1244.83Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ILM99.040e-1137.74Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IQ483.370e-731.91Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 383..400
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 381..400
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000879_piloncontigtig00000879_pilon:39300..41162 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6226.t1Ggra6226.t1Gracilaria gracilis GNS1m malemRNAtig00000879_pilon 39300..41162 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6226.t1 ID=Ggra6226.t1|Name=Ggra6226.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=401bp
MCSSESSVSIPRHIADSNNGLSSSPVAQPSPSQTSPNVMDNHPNYPGQGS
ASSSQHPHPIHATAPLPTVEAVPSDNVDVWNSAQAVPLYANSAGWVSKGS
LAVRDPLRDGDAFCRAPWFHPQAVNDTALLESYVENGVLPGGLPLAVVTS
NDWKVLVAIAPMLLRYDPRKNVEDVRHIIDVMDLVNWDLVPWANRNKGSR
NRWDRSPGRRHNTAGDFVCYDPWEGTLTTPVYAQWAQRQPTVLLAGHPTG
FVFSDNWVPPVDLDDPTVDVEVMEDEANAVGGVNRETVLLPEGNQVTHTV
GGVSQAPTGWNVPTPSSAPVTAPLPVSATMPAAFPTSTPVVATQPVDSPA
SVAALRESLRGVGIIVPDHLQSTAAILAYAPQPPGQGQSNQSVTGPSSGV
*
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