Ggra6222.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6222.t1
Unique NameGgra6222.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length317
Homology
[Close]
BLAST of Ggra6222.t1 vs. uniprot
Match: A0A2V3ILX8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILX8_9FLOR)

HSP 1 Score: 116 bits (290), Expect = 1.040e-27
Identity = 76/200 (38.00%), Postives = 110/200 (55.00%), Query Frame = 0 
Query:   77 MTLYRNKNNIKVKREKKLAAPIRFPPAVRLLATFPKFSSKLGESSRKATVQRTPPVMGVEQHIEETS----IGSVAMHNPTSSCPEGSKKEKKRQQIERNIGGLPKSVDAVNQTLRGSAISKRNAASISLQLKVLHRMTLSPKVMNERQEERMSHAAI----------------------SCLIGNTSSYQAANSTETDM 250
            MTLYRN N  K++ E +    IRF  AV LL+  PKFS+ +G SS+ A   +      +E+  E+++      SV+M  P S+ P G+KK K  +  ERN+  + KS+DA+ +++R SA +K+ AASI+LQLK+LHRM+     MN R ++ M+ AA+                      S LIGN SSYQ   S +  M
Sbjct:    1 MTLYRNNNKFKLRGELRTPGVIRFMSAVSLLSECPKFSATIGGSSQSAHGYKPKSPKTIEKQQEQSAAASNFASVSMSAPASNRPFGTKKRKAEEVFERNLCKVAKSMDAITESIRCSATNKKMAASIALQLKILHRMSTPATEMNRRFDDLMNKAALLGGFSSPKEMVSGSSEQNQDDTSGLIGNISSYQFNTSMDNQM 200
The following BLAST results are available for this feature:
BLAST of Ggra6222.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ILX81.040e-2738.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000167_piloncontigtig00000167_pilon:208457..209575 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6222.t1Ggra6222.t1Gracilaria gracilis GNS1m malemRNAtig00000167_pilon 208457..209575 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6222.t1 ID=Ggra6222.t1|Name=Ggra6222.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=317bp
MPHRKPEITKRGPNFTPEEDPALRRAWTVMSVSNGMQPSVALGNSGQTCP
KVYSGGETLSLSDSIRRDRGPTFQNIMTLYRNKNNIKVKREKKLAAPIRF
PPAVRLLATFPKFSSKLGESSRKATVQRTPPVMGVEQHIEETSIGSVAMH
NPTSSCPEGSKKEKKRQQIERNIGGLPKSVDAVNQTLRGSAISKRNAASI
SLQLKVLHRMTLSPKVMNERQEERMSHAAISCLIGNTSSYQAANSTETDM
FALNMNTIGAVAPHDGTSLEQQNETLGAIRLEAGYAVELQPLEAPRASPL
PPMLSMPMPSRASLDA*
back to top