Ggra6216.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra6216.t1 vs. uniprot
Match: A0A2V3IRD3 (DNA mismatch repair protein MSH5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRD3_9FLOR) HSP 1 Score: 273 bits (697), Expect = 3.280e-80 Identity = 191/547 (34.92%), Postives = 262/547 (47.90%), Query Frame = 0
Query: 1 MAKVLRGGKWGSAPSTSNSRSEVPSR----SQSERDADENSNEKGVLISFVEQKKPIDVAV------------VSCAEDYHDASRIVSVHDQCFIILPKLYQDDDKLINAIRPNVVPQTA-----------REQYQMSRGSHDRPP---------------KTRALLPLLSLIIPPPSSQVLNSALTKPRSSARCENAIIRAVGGLLSCILQQGVLGTLGGDSDEVRINAIFPKNYSNTMRMSPI---------------------------------------------------------------------------------------------------------------------------ALKTAAQQDERLLQSSLITRALRINESKLREPARWIESAVDFEECEATGRMVAAAGFSAEIDDLKRPPSGLDDFLTKVGINELERMTESSHALQIRSFHFKYEAQFGSLIVFPDRECEEIGIESFEEHCISFRFKSDDDGYHFKNKKCYDLDEEIGDIRGTILELKEHASRYLEATMLD 382
MAKVLRGGKWG APS SNS S+ S S++ RD+ ++ + +L SFVE +K + VA+ V C E+Y D SRIV+++++CF++LP YQ +D+L+ A+R + V QT R S S D P K+R L PLLS I+ P++ + + +N IIRA+GGLL+ ILQQGVLG L SD++ INAI PKN+ N MR+SP AL+ A +Q+ LL+SSL++R L ++ES++R+ ARWIES VDFEE + TGR++ +AGFS+ IDDLKR SGLD+ L +GI EL +MTE +++ +S +FKY G LI ECEEIG++ EEH + F F+ DD YHFKNK+C +LDEEIGDI G I+EL+ A YL +L+
Sbjct: 1 MAKVLRGGKWGPAPSRSNSYSQARSNQRTISETARDSYPDNKIESIL-SFVEGRKELGVALYESSTNMMFISKVPCFENYSDVSRIVALYERCFVVLPNSYQTNDRLLAALRSSAVLQTPSIPQDSSGVDPRPSTGTSASSTDFRPENSISFLPNSDFSLKKSRELCPLLS-ILDMPTNLSSEARMQYLSHIVEGDNLIIRAIGGLLAFILQQGVLGILQHKSDDICINAISPKNFCNLMRISPATQRSLNIFSYEAHPLGRGGLSAKEGLSLFGILKSHVKTGAARHLLRSWLLHPLTDVPKIRERQFLVRTLKDNGKRTFLITIRDALRGVKNVSGLLARLRRCTTDINDWKALHSSATAFIVIIEALRAAVRQNSNLLESSLVSRVLGVSESQIRDTARWIESVVDFEESKETGRLIVSAGFSSHIDDLKRTYSGLDELLRTIGIEELSKMTEGDGSIRFKSCNFKYIPNIGFLIAISTMECEEIGLDRLEEHGLEFVFRPDDTSYHFKNKRCLELDEEIGDIYGNIVELESQAFSYLGGKILE 545
BLAST of Ggra6216.t1 vs. uniprot
Match: R7QMJ8 (MUTSd domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMJ8_CHOCR) HSP 1 Score: 152 bits (383), Expect = 5.100e-38 Identity = 75/178 (42.13%), Postives = 111/178 (62.36%), Query Frame = 0
Query: 205 LKTAAQQDERLLQSSLITRALRINESKLREPARWIESAVDFEECEATGRMVAAAGFSAEIDDLKRPPSGLDDFLTKVGINELERMTESSHALQIRSFHFKYEAQFGSLIVFPDRECEEIGIESFEEHCISFRFKSDDDGYHFKNKKCYDLDEEIGDIRGTILELKEHASRYLEATMLD 382
+K A QQ+E + S L A ++E+ LR+ WI++ VDFEE A+G++V A GFS EID++KR SGLDDFLT V + E E E + + S F Y+ Q G L++ + + +G E+ ++ +SF F S + GYHFKN +C LD+E+GDI G I++L+ A RYLE + +
Sbjct: 221 MKVAMQQNEDVKSSPLFAHATSVSETHLRQCVDWIDAVVDFEESTASGKLVVAQGFSEEIDEMKRCHSGLDDFLTSVAVQEHENFLEMDNPPSLSSLCFTYQPQIGYLVMLSKADVDRVGFENLKQCGMSFIFSSPEQGYHFKNDRCTQLDDELGDIYGAIMDLESKAYRYLETKVFE 398
BLAST of Ggra6216.t1 vs. uniprot
Match: A0A1X6NMY5 (DNA_MISMATCH_REPAIR_2 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NMY5_PORUM) HSP 1 Score: 65.5 bits (158), Expect = 8.150e-8 Identity = 49/185 (26.49%), Postives = 82/185 (44.32%), Query Frame = 0
Query: 227 INESKLREPARWIESAVDFEECEATGRMVAAA---GFSAEIDDLKRPPSGLDDFLTKVGINELERMTESSHALQIRSFHFKYEAQFGSLIVFPDRECEEIGIE---------------------------SFEEHCISFRFKSDDDGYHFKNKKCYDLDEEIGDIRGTILELKEHASRYLEATML 381
+ E LR+ WIE+ +DF TG G S ++D+L+R LDDFL+ +G+ E+ +T S LQ+ H + + G L+V + + + E + F F +D+ Y FKN++C++LD E+GDI I +++ A YL ++
Sbjct: 384 VPEEGLRQVCTWIENTIDFP-ASLTGNSTRPRIRDGLSEDLDELRRCFDSLDDFLSDIGVQEMNALT--SRGLQLDRLHIIFLPRVGYLLVLSHATAIDAAQQVVDGAGEDDVNSRLSASSRASTVSEQSALAEVGLEFVFTTDEHVY-FKNERCHELDNELGDISSAIEAVEQKAVCYLRTKVV 564
BLAST of Ggra6216.t1 vs. uniprot
Match: M2XAS8 (DNA mismatch repair protein MutS n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XAS8_GALSU) HSP 1 Score: 59.7 bits (143), Expect = 5.600e-6 Identity = 44/159 (27.67%), Postives = 77/159 (48.43%), Query Frame = 0
Query: 232 LREPARWIESAVDFEECEATGRMVAAAGFSAEIDDLKRPPSGLDDFLTKVGINELERMTESSHALQIRSFHFKYEAQFGSLIVFPDRECEEIG---------IESFEEHCISFRFKSDDDGYHFKNKKCYDLDEEIGDIRGTILELKEHASRYLEATML 381
LR WIE ++F+E + GR+ G+ ++D+ + L++ LT+VG NE+ER+ + + I Y + G L+ + E G ++S+ + + F + D Y +K +LDE++GDI TILEL+ LE ++
Sbjct: 377 LRNILSWIERVLNFKESKLQGRIYVNDGYCEDLDNARCFYYSLEEHLTEVGSNEIERL--DALGVHIPWIKVTYIPRLGYLLATGKEDNESRGDTIGSLDLTVQSYAKD-LELAFSTSDTVY-YKTSTMRELDEKLGDIFDTILELENECLHVLEQQVI 531 The following BLAST results are available for this feature:
BLAST of Ggra6216.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 4
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra6216.t1 ID=Ggra6216.t1|Name=Ggra6216.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=383bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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