Ggra619.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra619.t1
Unique NameGgra619.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length474
Homology
BLAST of Ggra619.t1 vs. uniprot
Match: A0A2V3IJ61 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ61_9FLOR)

HSP 1 Score: 679 bits (1752), Expect = 8.870e-242
Identity = 333/473 (70.40%), Postives = 398/473 (84.14%), Query Frame = 0
Query:    1 MSSTFLRRAFATEIPNGTSPLQLFRLFFNSAIVLYHTAFYLAFSLSSSAPADALINDFSSFSAMLFQFINFGFRYGVDAFFFLSGFCLAPRLRSCFTDDGSAISSVAVVRYLFFRWLRLAPLYTITSLIYATIGNSLCPNIPEIFLFGNIFTIAHDRCLIEGWSTIVDFQAHLAVCLLAIGSRSLLNLQFALAISILGSALARMAKWYDAGFPSWPLMFNVQDVTKSYNAKIALATTHKLRMGSFDVNSHEAVSRRNVFQAYYPLYFQTDYRLIPCMIGFLVWYEMNKKGVVYLLVLRRRLTAVLTAVLLISADYFSLYYFHPSSKTFNKYFGFIHEGLGSLFVVLGLGIFVMASCSVNTEQDNESQANKASDLS-SRIRRLLNNPITSVWSRSLYAIYQLHPIFMRVVTWVGPDITDTNFSHATILVKGLMLYVCTLVFSAPVTAVEQILLDLRSLMKNKARQFSSKETRKD 472
            MSS FLRRAF + +P GT  LQ+ R++FN AIVLYH AFYLAFSLSSSAPADALIN+FSS SA+LFQF+NFGFRYGVDAFFFLSGFC+AP+L++CF  DGS IS  AVVRY+  RWLRLAP+YTITS+IYA IGNSLCPN+ EI LFGN+FTIAHDRCLIEGWST+VDFQ H+ +C+LA+ SRSL  LQFAL ISILGSAL+R+  WY+AGFP+WPLMFNVQDVTK+Y+AK+ALATTH+L MG+FDV S++A+SRR +FQAYYPLYFQT YRLIPCMIGFLVWYEM +KG V+LLVLRR+  AV+T +LL+  DYF+L+YFHPSSKTFNKYFG +HEG GS  VV GLG+ VMA C V+T++  +   +K   +S SR++ LLNNPI S WSRSLYAIYQLHP F+R VTWVGP++ D NFSHA +LVKGLMLY CT+ FS PV AVEQ+ L+LR  +KNKA   S++ ++KD
Sbjct:   36 MSSLFLRRAFTSRVPTGTLALQVIRIYFNVAIVLYHAAFYLAFSLSSSAPADALINEFSSVSAVLFQFVNFGFRYGVDAFFFLSGFCMAPKLKACFNVDGSKISLGAVVRYILLRWLRLAPMYTITSMIYAAIGNSLCPNLAEILLFGNLFTIAHDRCLIEGWSTVVDFQVHIVICVLALVSRSLSILQFALGISILGSALSRIMIWYEAGFPAWPLMFNVQDVTKTYSAKVALATTHRLNMGAFDVQSYDAMSRRRIFQAYYPLYFQTGYRLIPCMIGFLVWYEMYRKGFVHLLVLRRKAAAVVTGLLLMLMDYFALFYFHPSSKTFNKYFGALHEGFGSALVVGGLGLIVMACCRVDTDEAGDLNHDKRQRVSCSRLQHLLNNPIISFWSRSLYAIYQLHPNFVRTVTWVGPNVADENFSHAVVLVKGLMLYACTVAFSVPVIAVEQVCLELRFYLKNKAEPTSAEPSKKD 508          
BLAST of Ggra619.t1 vs. uniprot
Match: A0A2V3IKD8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKD8_9FLOR)

HSP 1 Score: 152 bits (384), Expect = 1.900e-40
Identity = 82/158 (51.90%), Postives = 108/158 (68.35%), Query Frame = 0
Query:  315 YFSLYYFHPSSKTFNKYFGFIHEGLGSLFVVLGLGIFVMASCSVNTEQDNESQANKASD-LSSRIRRLLNNPITSVWSRSLYAIYQLHPIFMRVVTWVGPDITDTNFSHATILVKGLMLYVCTLVFSAPVTAVEQILLDLRSLMKNKARQFSSKETRK 471
            Y +L+YFHPSSKTFNK        L    +V GL + V+A C V+T++  ++  +K    L+SR + LL+N I S WSR LY I+ LH  F+R VTWVGP++TD NF HA +LVKGLMLY CT+ FSAPVTAVEQI L+LRS +K+K  + S K  ++
Sbjct:    5 YVALFYFHPSSKTFNKMLLSFTPRLWLSNLVGGLVLIVIARCKVDTDEAGDANNDKRKRILASRSQHLLDNRIVSFWSRILYTIHLLHLNFVRAVTWVGPNVTDANFPHAVVLVKGLMLYACTVAFSAPVTAVEQIFLELRSYVKSKVGKTSEKPAKR 162          
BLAST of Ggra619.t1 vs. uniprot
Match: A0A2V3ILP7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILP7_9FLOR)

HSP 1 Score: 159 bits (402), Expect = 9.250e-40
Identity = 122/458 (26.64%), Postives = 220/458 (48.03%), Query Frame = 0
Query:   10 FATEIPNGTSPLQLFRLFFNSAIVLYHTAFYLAFSLSSSAPADALINDFSSFSAMLFQFINFGFRYGVDAFFFLSGFCLAPRLRSCFTDDGSA--ISSVAVVRYLFFRWLRLAPLYTITSLIYATIGNSLCPNIPEIFLFGNIFTIAHDRCLIEGWSTIVDFQAHLAVCLLAIGSRSLLNLQFALAISILGSALARMAKWYDAGFPSWPLMFNVQDV--TKSYNAKIALATTHKLRMGSFDVN-SHEAVSRRNVFQAYYPLYFQTDYRLIPCMIGFLVWYEMNKKGVVYLLVLRRRLTAVLTAVLLISADYFSLYYFHPSSKTFNKYFGFIHEGLGSLFVVLGLGIFVMASCSVNTEQDNESQANKASDLSSRI-RRLLNNPITSVWSRSLYAIYQLHPIFMRVVTWVGPDITDTNFSHATILVKGLMLYVCTLVFSAPVTAVEQILLDLRSLMKNKA 461
            F + +   T+PL+  R+ F   IV  H    LA +L+S  PA  LIN     S      ++FGF+ GVD F  +SGF +A +    F    S+  +     + YLFFRWLRL PLY +  ++Y       CP   E+F   +        CL +GWST+VD+Q H+ + L+A+       L   + I+I+ +A++R+       +       ++  +  T +   K++LA   ++++G+++ +  H   +RR   +A +     T  ++   M GFL+  E+   G VY  +      +++ A  L++    S    +P    +      + EG+ +   +  +GI ++ +CS N  Q    +  ++  L+ RI + +L NPI  + ++  Y+IY  H + +     VGP +TD  F+   +  KGL  +V   + S  +  +E+++L  R+ +  K+
Sbjct:   10 FKSSVSASTAPLEGLRVLFCYFIVAGHMVICLAVALNSPEPAIVLINATDFLSVFSLNLVDFGFKNGVDIFLLISGFFMARKFHRSFPYGNSSFVVRLKYALHYLFFRWLRLVPLYFVVFMLYTAGSAPNCPKWNELFFVHDPSGDVTTMCLGQGWSTMVDYQIHIVIALMAVLFTDESVLCKTMLITIVAAAVSRVLSVLTTDYLVSEQFRDILVLHETLTDKLKMSLAEALQVKLGAYEPSPEHVTTARRLRQRASFTPPTATIMKVHSVMTGFLLHRELQSAGRVYKALQNHSNLSLVLAGFLVALSNMSRPSPNPDGSNYELVLSALKEGIRTPSALFAIGIIILLTCSPNKWQRTGLEHKQS--LAPRILQTVLGNPIMVMAAQLSYSIYLSHFLVLSTQVVVGPQVTDETFTLKVLGQKGLACFVFAALLSVLLVVIEKVMLRGRTFLMKKS 465          
The following BLAST results are available for this feature:
BLAST of Ggra619.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IJ618.870e-24270.40Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IKD81.900e-4051.90Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ILP79.250e-4026.64Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 364..384
NoneNo IPR availablePANTHERPTHR11161O-ACYLTRANSFERASEcoord: 10..465
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 265..284
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 190..208
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 430..451
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 452..473
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 381..398
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 361..380
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 342..360
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..83
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 23..43
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 285..303
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 44..62
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 209..264
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 399..429
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 304..322
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 323..341
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 84..189
NoneNo IPR availableTMHMMTMhelixcoord: 301..323
NoneNo IPR availableTMHMMTMhelixcoord: 338..360
NoneNo IPR availableTMHMMTMhelixcoord: 63..85
NoneNo IPR availableTMHMMTMhelixcoord: 429..451
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000895_piloncontigtig00000895_pilon:82186..83607 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra619.t1Ggra619.t1Gracilaria gracilis GNS1m malemRNAtig00000895_pilon 82186..83607 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra619.t1 ID=Ggra619.t1|Name=Ggra619.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=474bp
MSSTFLRRAFATEIPNGTSPLQLFRLFFNSAIVLYHTAFYLAFSLSSSAP
ADALINDFSSFSAMLFQFINFGFRYGVDAFFFLSGFCLAPRLRSCFTDDG
SAISSVAVVRYLFFRWLRLAPLYTITSLIYATIGNSLCPNIPEIFLFGNI
FTIAHDRCLIEGWSTIVDFQAHLAVCLLAIGSRSLLNLQFALAISILGSA
LARMAKWYDAGFPSWPLMFNVQDVTKSYNAKIALATTHKLRMGSFDVNSH
EAVSRRNVFQAYYPLYFQTDYRLIPCMIGFLVWYEMNKKGVVYLLVLRRR
LTAVLTAVLLISADYFSLYYFHPSSKTFNKYFGFIHEGLGSLFVVLGLGI
FVMASCSVNTEQDNESQANKASDLSSRIRRLLNNPITSVWSRSLYAIYQL
HPIFMRVVTWVGPDITDTNFSHATILVKGLMLYVCTLVFSAPVTAVEQIL
LDLRSLMKNKARQFSSKETRKDM*
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