Ggra619.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra619.t1
Unique NameGgra619.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length474
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000895_piloncontigtig00000895_pilon:82186..83607 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra619Ggra619Gracilaria gracilis GNS1m malegenetig00000895_pilon 82186..83607 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra619.t1.stop1Ggra619.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000895_pilon 82186..82188 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra619.t1.CDS1Ggra619.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000895_pilon 82186..83607 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra619.t1.exon1Ggra619.t1.exon1Gracilaria gracilis GNS1m maleexontig00000895_pilon 82186..83607 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra619.t1.start1Ggra619.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000895_pilon 83605..83607 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra619.t1Ggra619.t1Gracilaria gracilis GNS1m malepolypeptidetig00000895_pilon 82186..83607 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra619.t1 ID=Ggra619.t1|Name=Ggra619.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=474bp
MSSTFLRRAFATEIPNGTSPLQLFRLFFNSAIVLYHTAFYLAFSLSSSAP
ADALINDFSSFSAMLFQFINFGFRYGVDAFFFLSGFCLAPRLRSCFTDDG
SAISSVAVVRYLFFRWLRLAPLYTITSLIYATIGNSLCPNIPEIFLFGNI
FTIAHDRCLIEGWSTIVDFQAHLAVCLLAIGSRSLLNLQFALAISILGSA
LARMAKWYDAGFPSWPLMFNVQDVTKSYNAKIALATTHKLRMGSFDVNSH
EAVSRRNVFQAYYPLYFQTDYRLIPCMIGFLVWYEMNKKGVVYLLVLRRR
LTAVLTAVLLISADYFSLYYFHPSSKTFNKYFGFIHEGLGSLFVVLGLGI
FVMASCSVNTEQDNESQANKASDLSSRIRRLLNNPITSVWSRSLYAIYQL
HPIFMRVVTWVGPDITDTNFSHATILVKGLMLYVCTLVFSAPVTAVEQIL
LDLRSLMKNKARQFSSKETRKDM*
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spliced messenger RNA

>Ggra619.t1 ID=Ggra619.t1|Name=Ggra619.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1422bp|location=Sequence derived from alignment at tig00000895_pilon:82186..83607- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAGTTCTACATTTCTTAGACGTGCCTTCGCCACCGAGATTCCGAATGG
CACCTCTCCATTGCAACTCTTTCGATTATTCTTCAATTCTGCCATTGTAC
TCTACCACACGGCTTTTTATCTCGCGTTCTCTCTTTCTTCTTCAGCTCCG
GCTGATGCGCTCATAAATGACTTTTCGTCATTCTCAGCGATGTTATTTCA
GTTCATTAACTTTGGGTTTCGATATGGAGTAGATGCGTTCTTTTTTCTAA
GTGGTTTTTGCTTGGCTCCGAGGCTGAGATCATGTTTCACGGATGATGGT
AGTGCCATATCTTCCGTTGCTGTCGTTCGATATCTGTTCTTTAGATGGCT
TCGACTGGCTCCTTTGTACACCATCACATCTCTTATTTACGCTACAATCG
GGAATTCCTTGTGCCCCAACATTCCGGAAATCTTCCTGTTCGGCAACATT
TTCACTATTGCGCATGACAGATGCCTCATCGAAGGGTGGTCTACAATTGT
TGATTTTCAGGCTCATCTTGCGGTTTGTCTATTGGCAATAGGGTCTCGCT
CGTTACTGAACCTGCAGTTTGCATTGGCTATAAGTATTCTAGGTTCCGCG
CTAGCCAGAATGGCCAAGTGGTATGACGCTGGTTTTCCTTCTTGGCCGCT
AATGTTCAACGTTCAAGACGTGACAAAGTCCTACAACGCAAAAATCGCTC
TGGCCACTACGCACAAGTTACGAATGGGTTCTTTCGATGTCAATTCTCAC
GAGGCCGTTAGTCGTCGAAATGTTTTTCAAGCGTACTACCCTCTATATTT
TCAAACCGATTATCGTCTGATTCCTTGTATGATTGGATTTCTTGTGTGGT
ATGAGATGAACAAGAAAGGAGTTGTTTATCTGCTCGTACTACGCCGTAGA
CTTACTGCTGTCCTTACCGCGGTGCTGCTAATCTCTGCCGATTATTTTTC
TCTCTACTATTTCCATCCGTCATCGAAGACATTTAACAAGTATTTTGGAT
TTATACACGAAGGCTTAGGTTCACTGTTTGTAGTACTTGGACTAGGAATT
TTTGTTATGGCAAGCTGCTCTGTTAATACCGAACAAGATAATGAATCGCA
AGCCAATAAGGCCAGTGATTTGAGTTCTCGCATAAGGCGATTACTCAACA
ACCCCATTACATCTGTATGGAGCCGAAGCTTGTATGCCATTTATCAGCTC
CACCCTATCTTTATGAGGGTAGTAACATGGGTTGGTCCCGATATCACTGA
CACAAACTTCTCTCACGCTACAATACTTGTGAAAGGTCTGATGCTGTACG
TATGTACTCTGGTTTTCTCCGCTCCAGTGACTGCCGTGGAGCAGATACTT
TTAGATCTTAGATCTTTGATGAAGAACAAGGCGAGGCAATTTTCATCTAA
GGAGACCAGGAAGGACATGTAA
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protein sequence of Ggra619.t1

>Ggra619.t1 ID=Ggra619.t1|Name=Ggra619.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=474bp
MSSTFLRRAFATEIPNGTSPLQLFRLFFNSAIVLYHTAFYLAFSLSSSAP
ADALINDFSSFSAMLFQFINFGFRYGVDAFFFLSGFCLAPRLRSCFTDDG
SAISSVAVVRYLFFRWLRLAPLYTITSLIYATIGNSLCPNIPEIFLFGNI
FTIAHDRCLIEGWSTIVDFQAHLAVCLLAIGSRSLLNLQFALAISILGSA
LARMAKWYDAGFPSWPLMFNVQDVTKSYNAKIALATTHKLRMGSFDVNSH
EAVSRRNVFQAYYPLYFQTDYRLIPCMIGFLVWYEMNKKGVVYLLVLRRR
LTAVLTAVLLISADYFSLYYFHPSSKTFNKYFGFIHEGLGSLFVVLGLGI
FVMASCSVNTEQDNESQANKASDLSSRIRRLLNNPITSVWSRSLYAIYQL
HPIFMRVVTWVGPDITDTNFSHATILVKGLMLYVCTLVFSAPVTAVEQIL
LDLRSLMKNKARQFSSKETRKDM*
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mRNA from alignment at tig00000895_pilon:82186..83607-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra619.t1 ID=Ggra619.t1|Name=Ggra619.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1422bp|location=Sequence derived from alignment at tig00000895_pilon:82186..83607- (Gracilaria gracilis GNS1m male)
ATGAGTTCTACATTTCTTAGACGTGCCTTCGCCACCGAGATTCCGAATGG
CACCTCTCCATTGCAACTCTTTCGATTATTCTTCAATTCTGCCATTGTAC
TCTACCACACGGCTTTTTATCTCGCGTTCTCTCTTTCTTCTTCAGCTCCG
GCTGATGCGCTCATAAATGACTTTTCGTCATTCTCAGCGATGTTATTTCA
GTTCATTAACTTTGGGTTTCGATATGGAGTAGATGCGTTCTTTTTTCTAA
GTGGTTTTTGCTTGGCTCCGAGGCTGAGATCATGTTTCACGGATGATGGT
AGTGCCATATCTTCCGTTGCTGTCGTTCGATATCTGTTCTTTAGATGGCT
TCGACTGGCTCCTTTGTACACCATCACATCTCTTATTTACGCTACAATCG
GGAATTCCTTGTGCCCCAACATTCCGGAAATCTTCCTGTTCGGCAACATT
TTCACTATTGCGCATGACAGATGCCTCATCGAAGGGTGGTCTACAATTGT
TGATTTTCAGGCTCATCTTGCGGTTTGTCTATTGGCAATAGGGTCTCGCT
CGTTACTGAACCTGCAGTTTGCATTGGCTATAAGTATTCTAGGTTCCGCG
CTAGCCAGAATGGCCAAGTGGTATGACGCTGGTTTTCCTTCTTGGCCGCT
AATGTTCAACGTTCAAGACGTGACAAAGTCCTACAACGCAAAAATCGCTC
TGGCCACTACGCACAAGTTACGAATGGGTTCTTTCGATGTCAATTCTCAC
GAGGCCGTTAGTCGTCGAAATGTTTTTCAAGCGTACTACCCTCTATATTT
TCAAACCGATTATCGTCTGATTCCTTGTATGATTGGATTTCTTGTGTGGT
ATGAGATGAACAAGAAAGGAGTTGTTTATCTGCTCGTACTACGCCGTAGA
CTTACTGCTGTCCTTACCGCGGTGCTGCTAATCTCTGCCGATTATTTTTC
TCTCTACTATTTCCATCCGTCATCGAAGACATTTAACAAGTATTTTGGAT
TTATACACGAAGGCTTAGGTTCACTGTTTGTAGTACTTGGACTAGGAATT
TTTGTTATGGCAAGCTGCTCTGTTAATACCGAACAAGATAATGAATCGCA
AGCCAATAAGGCCAGTGATTTGAGTTCTCGCATAAGGCGATTACTCAACA
ACCCCATTACATCTGTATGGAGCCGAAGCTTGTATGCCATTTATCAGCTC
CACCCTATCTTTATGAGGGTAGTAACATGGGTTGGTCCCGATATCACTGA
CACAAACTTCTCTCACGCTACAATACTTGTGAAAGGTCTGATGCTGTACG
TATGTACTCTGGTTTTCTCCGCTCCAGTGACTGCCGTGGAGCAGATACTT
TTAGATCTTAGATCTTTGATGAAGAACAAGGCGAGGCAATTTTCATCTAA
GGAGACCAGGAAGGACATGTAA
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Coding sequence (CDS) from alignment at tig00000895_pilon:82186..83607-

>Ggra619.t1 ID=Ggra619.t1|Name=Ggra619.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1422bp|location=Sequence derived from alignment at tig00000895_pilon:82186..83607- (Gracilaria gracilis GNS1m male)
ATGAGTTCTACATTTCTTAGACGTGCCTTCGCCACCGAGATTCCGAATGG
CACCTCTCCATTGCAACTCTTTCGATTATTCTTCAATTCTGCCATTGTAC
TCTACCACACGGCTTTTTATCTCGCGTTCTCTCTTTCTTCTTCAGCTCCG
GCTGATGCGCTCATAAATGACTTTTCGTCATTCTCAGCGATGTTATTTCA
GTTCATTAACTTTGGGTTTCGATATGGAGTAGATGCGTTCTTTTTTCTAA
GTGGTTTTTGCTTGGCTCCGAGGCTGAGATCATGTTTCACGGATGATGGT
AGTGCCATATCTTCCGTTGCTGTCGTTCGATATCTGTTCTTTAGATGGCT
TCGACTGGCTCCTTTGTACACCATCACATCTCTTATTTACGCTACAATCG
GGAATTCCTTGTGCCCCAACATTCCGGAAATCTTCCTGTTCGGCAACATT
TTCACTATTGCGCATGACAGATGCCTCATCGAAGGGTGGTCTACAATTGT
TGATTTTCAGGCTCATCTTGCGGTTTGTCTATTGGCAATAGGGTCTCGCT
CGTTACTGAACCTGCAGTTTGCATTGGCTATAAGTATTCTAGGTTCCGCG
CTAGCCAGAATGGCCAAGTGGTATGACGCTGGTTTTCCTTCTTGGCCGCT
AATGTTCAACGTTCAAGACGTGACAAAGTCCTACAACGCAAAAATCGCTC
TGGCCACTACGCACAAGTTACGAATGGGTTCTTTCGATGTCAATTCTCAC
GAGGCCGTTAGTCGTCGAAATGTTTTTCAAGCGTACTACCCTCTATATTT
TCAAACCGATTATCGTCTGATTCCTTGTATGATTGGATTTCTTGTGTGGT
ATGAGATGAACAAGAAAGGAGTTGTTTATCTGCTCGTACTACGCCGTAGA
CTTACTGCTGTCCTTACCGCGGTGCTGCTAATCTCTGCCGATTATTTTTC
TCTCTACTATTTCCATCCGTCATCGAAGACATTTAACAAGTATTTTGGAT
TTATACACGAAGGCTTAGGTTCACTGTTTGTAGTACTTGGACTAGGAATT
TTTGTTATGGCAAGCTGCTCTGTTAATACCGAACAAGATAATGAATCGCA
AGCCAATAAGGCCAGTGATTTGAGTTCTCGCATAAGGCGATTACTCAACA
ACCCCATTACATCTGTATGGAGCCGAAGCTTGTATGCCATTTATCAGCTC
CACCCTATCTTTATGAGGGTAGTAACATGGGTTGGTCCCGATATCACTGA
CACAAACTTCTCTCACGCTACAATACTTGTGAAAGGTCTGATGCTGTACG
TATGTACTCTGGTTTTCTCCGCTCCAGTGACTGCCGTGGAGCAGATACTT
TTAGATCTTAGATCTTTGATGAAGAACAAGGCGAGGCAATTTTCATCTAA
GGAGACCAGGAAGGACATGTAA
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