Ggra6170.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6170.t1
Unique NameGgra6170.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length440
Homology
The following BLAST results are available for this feature:
BLAST of Ggra6170.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 271..290
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 260..270
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..239
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 240..259
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 291..439
NoneNo IPR availableTMHMMTMhelixcoord: 240..259
NoneNo IPR availableTMHMMTMhelixcoord: 272..291

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:877664..878983 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6170.t1Ggra6170.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 877664..878983 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6170.t1 ID=Ggra6170.t1|Name=Ggra6170.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=440bp
MRPDIGYNDAGEVVAAHASIRQEEVLKARAYDDQIDAALSHLEVIEAWHC
DAAKDIFTSELSTGMSNNLGDYVWDRLLPYSYKIMHATKTPARSVEEIQE
YIKSFSNTSNLLKHVFAVELNTLLKKKVIDGTRELLLVNGSNRTPISAAK
VIRAMLRRAEVRDATERRANVLNSIIDCSFSEMLYALRQPNICFSIAHDS
RHQHAITTARGVDSSVSAKLRRAERRFNENGEILIGLREWISLASSFSLA
VAIGILVGVKNWAKRENALERVFDAFGAASIVSATLVAVASRKLDIVDLL
YALGGKRRFITSYTELLALVGASEEEIKTCLTFEGHHLPPIAGEGACFTA
EKHDGVFPLRTGLSSTERKSNIIIGNFAAVLLRETDTRCYRVYGKGDTRH
LLVSDDALYRLVAPGEVFTAGSLSALTTTPTASLTKQDR*
back to top