Ggra6143.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6143.t1
Unique NameGgra6143.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length447
Homology
BLAST of Ggra6143.t1 vs. uniprot
Match: A0A2V3IFE9 (Desert hedgehog protein A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFE9_9FLOR)

HSP 1 Score: 421 bits (1082), Expect = 3.280e-140
Identity = 247/455 (54.29%), Postives = 285/455 (62.64%), Query Frame = 0
Query:    7 LGLLVAILSFCGTALGVKSPRVFSESYIEGVYGRFFEFSDEGNSAPCPQVIDHYHRGRPTALGDSWIIPHANIVQSGAKCRDGGVLVLNSYNESSRMPNVLESNRIAEETFTLMKEESTGFWMGADERRCGKWVFPSRTYIFFVKEFDRTLTTSFRLTLSPGKKYMFAVADQFTCIYVDIPRTKPVSPVTIATPGGSTPSASTGPSAEDGTSTDKEPSNGPTPTPTSANTADETDEASADGGQDSTXXXXXXXXXXDEGSDP-----------------------------------------------NGGLSIVDVDNGQLPEETEDVAGGTIADIGT---GSNDEESVEATPDSFGVDVNNGESLCFPGDAQVEMIDGTFKQMTDLAIGDEVRVGKQFSRVFMFTHKKAGSFNRFVQLETTSGRRLALTSGHMLYVNGIIKAAKEVRVGDRL 411
            L + +  LS   TA G KSPRVFSESYIEGVYGRFFEFSD GNSAPCPQVIDH++RG P+ALGDSWIIPH NIVQSGAKCRDGGVLVLNSYNESS MP  LESN+IAEETFTLMKEESTGFWMGAD+R+CGKW+FP RTY+FFVKEFDR LTTSFRLTLS GKKYMF V+D FTCIYVDIPR++P S V I TP G                 + +PS+   P+P                     XXXXXXXXXX                                                     + G+SI+DVDNGQ P                     N+E+  +AT +SF V+ + GESLCFP DA VEMIDG+ K+M +L IGDE+RVG QFS VF+FTH +  +   FVQ+ET S R+LALT+GHMLY NGI+KAA  V+  D L
Sbjct:    7 LSVFIGFLSIWSTASGAKSPRVFSESYIEGVYGRFFEFSDRGNSAPCPQVIDHFNRGEPSALGDSWIIPHGNIVQSGAKCRDGGVLVLNSYNESSAMPKALESNQIAEETFTLMKEESTGFWMGADDRKCGKWLFPKRTYVFFVKEFDRNLTTSFRLTLSAGKKYMFVVSDYFTCIYVDIPRSRPGSDVVI-TPSGE----------------NVKPSDASKPSPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSGXXXXXXXXXXSSNGVSIIDVDNGQAPXXXXXXXXXXXXXXXXXXXSGNNEDDAQATDESFDVETSTGESLCFPSDATVEMIDGSSKRMDELVIGDEIRVGDQFSPVFLFTHNQKETLRSFVQIETESHRKLALTAGHMLYANGILKAAMHVKTDDHL 444          
BLAST of Ggra6143.t1 vs. uniprot
Match: R7QFF2 (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFF2_CHOCR)

HSP 1 Score: 290 bits (743), Expect = 1.880e-89
Identity = 182/435 (41.84%), Postives = 242/435 (55.63%), Query Frame = 0
Query:   27 RVFSESYIEGVYGRFFEFSDEGNSAPCPQVIDHYHRGRPTALGDSWIIPHANIVQSGAKCRDGGVLVLNSYNESSRMPNVLESNRIAEETFTLMKEESTGFWMGADERRCGKWVFPSRTYIFFVKEFDRTLTTSFRLTLSPGKKYMFAVADQFTCIYVDIPRTKPVSPVTIATPGGSTPSASTGPSAEDGTSTDKEPSNGPTPT----PTSANTADETDEASADGGQD--STXXXXXXXXXXDEGSDPNG----------GLSIVDVDNGQ---LPEETEDVAGGTIADI------------------------------GTGSNDEESVEATPDSFGVDVNNGESLCFPGDAQVEMIDGTFKQMTDLAIGDEVRVG-KQFSRVFMFTHKKAGSFNRFVQLETTSGRRLALTSGHMLYVNGIIKAAKEVRVGDRL 411
            R FS+ YI+GVYGRFFE S +GNSAPCP VI+H+ +G P+A G +W +PH  IVQ+G  C   G LVL +Y++ S+ P  L+ N IA++TF +MK ESTGFWMG D R CGKW+FP+ ++IFF++EF+R L + F L L+PGKKYMF  A  FTCIY +IP+      V  ATP G T        A      +K  SNG   T    P  A  +D TD  SA G Q+  ST           + ++ N            +SIVD+ NG     P+        +IADI                              GTG  D ES+      F ++ N+GESLCFP  A+VE+++G+  +M  L IG+EV+V  ++FSR+FMFTH        FV++ T  G+ L LT GH+LY+NG +K A E RVGD L
Sbjct:   57 RAFSQGYIKGVYGRFFELSQQGNSAPCPIVINHFEQGSPSASGHTWTVPHDKIVQNGVLCDGDGDLVLYAYDQKSQSPAPLKENDIAQQTFEIMKNESTGFWMGIDSRTCGKWIFPNPSFIFFIREFERELKSFFNLQLAPGKKYMFVAAPTFTCIYSEIPKPGG-GLVPPATPSGGT-DTEVNSEATSSPMQEKPISNGSAATSNLVPPGAQGSD-TDANSAIGEQNEVSTTGDGPTPSMLPDENEENAQAITNPASPQDISIVDIANGSDAPSPDTGLGTGNESIADINGSSAGNSGEDAEIAISSPAEDGGDDGLIDGTGEADGESL------FDLESNSGESLCFPASAKVELLNGSVVEMRSLTIGEEVKVAPERFSRIFMFTHSSEDGTYLFVRIGTRCGKNLRLTPGHLLYINGALKRASEARVGDFL 482          
BLAST of Ggra6143.t1 vs. uniprot
Match: R7Q619 (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q619_CHOCR)

HSP 1 Score: 99.4 bits (246), Expect = 3.770e-20
Identity = 59/134 (44.03%), Postives = 80/134 (59.70%), Query Frame = 0
Query:  282 LPEETEDVAGGTIADIGTGSNDEESVEATPDSFGVDVNNGESLCFPGDAQVEMIDGTFKQMTDLAIGDEVRVG-KQFSRVFMFTHKKAGSFNRFVQLETTSGRRLALTSGHMLYVNGIIKAAKEVRVGDRLSLS 414
            +P E+E  A   ++D+        S   + D  G D  + +S+CFP +A VE+ +G  K M+ + +GD VRVG   FS VFMFTHK A     FV L T SG  L+LT GH LYVNG++ AAK VR GD ++L+
Sbjct:   36 VPGESEPAATDDLSDL--------SPSPSLDDEGED--DDDSVCFPANALVELENGATKMMSQVQLGDRVRVGPNDFSDVFMFTHKTAAIKYSFVTLATQSGHTLSLTKGHYLYVNGVVAAAKTVRSGDFITLA 159          
BLAST of Ggra6143.t1 vs. uniprot
Match: A0A7S3AAJ1 (Hypothetical protein n=2 Tax=Eukaryota TaxID=2759 RepID=A0A7S3AAJ1_9RHOD)

HSP 1 Score: 88.6 bits (218), Expect = 1.280e-16
Identity = 44/95 (46.32%), Postives = 62/95 (65.26%), Query Frame = 0
Query:  322 ESLCFPGDAQVEMIDGTFKQMTDLAIGDEVRVG-KQFSRVFMFTHKKAGSFNRFVQLETTSGRRLALTSGHMLYVNGIIKAAKEVRVGDRLSLST 415
            E +CFPGDA VE+ DG+ K M +L +GD VRVG  ++S V+ F HK +     F+ +E      ++L+S H LYVNG + +A+EV+ GD L LST
Sbjct:   31 EPICFPGDASVELADGSMKTMRELQVGDSVRVGASEYSDVYFFGHKDSFGSAEFITIEGRDSVSISLSSLHYLYVNGSLVSAEEVKEGDVLELST 125          
BLAST of Ggra6143.t1 vs. uniprot
Match: A0A2V3IRZ6 (Indian hedgehog B protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRZ6_9FLOR)

HSP 1 Score: 91.7 bits (226), Expect = 2.340e-16
Identity = 44/91 (48.35%), Postives = 63/91 (69.23%), Query Frame = 0
Query:  324 LCFPGDAQVEMIDGTFKQMTDLAIGDEVRVG-KQFSRVFMFTHKKAGSFNRFVQLETTSGRRLALTSGHMLYVNGIIKAAKEVRVGDRLSL 413
            +CFP +A VEM DG+ K+M  + IGD V+VG   FS VFMFTHK +   ++FV+L+  SG  ++ TSGH +Y+NG + AA+  +VGD + L
Sbjct:  271 ICFPAEATVEMEDGSTKRMDQVQIGDRVKVGYDMFSEVFMFTHKVSKRVSQFVKLDMASGASISATSGHYVYLNGRLAAARTAKVGDVMEL 361          
BLAST of Ggra6143.t1 vs. uniprot
Match: A0A2V3IKI5 (Tyramine beta-hydroxylase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKI5_9FLOR)

HSP 1 Score: 89.4 bits (220), Expect = 2.820e-15
Identity = 51/126 (40.48%), Postives = 72/126 (57.14%), Query Frame = 0
Query:  292 GTIADIGTGSNDEESVEATPDSFGVDVNNGES-LCFPGDAQVEMIDGTFKQMTDLAIGDEVRVGK-QFSRVFMFTHKKAGSFNRFVQLETTSGRRLALTSGHMLYVNGIIKAAKEVRVGDRLSLST 415
            G+I D  T    EES  +  D            +CFP  A VE+ DG+ K+M +L IGD + VG  ++S VF+FTH+ +    RFVQL T+SG  + LTSGH LY+NG +  A   R GD +++ +
Sbjct:  628 GSITDSETTDETEESQTSPNDXXXXXXXXXXXXVCFPASASVELRDGSRKRMDELQIGDSILVGPGEYSEVFLFTHRTSRVLYRFVQLTTSSGATVKLTSGHFLYLNGKLAMAGSAREGDEVTVGS 753          
BLAST of Ggra6143.t1 vs. uniprot
Match: A0A2V3IKL0 (DBH-like monooxygenase protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKL0_9FLOR)

HSP 1 Score: 89.4 bits (220), Expect = 2.830e-15
Identity = 51/126 (40.48%), Postives = 72/126 (57.14%), Query Frame = 0
Query:  292 GTIADIGTGSNDEESVEATPDSFGVDVNNGES-LCFPGDAQVEMIDGTFKQMTDLAIGDEVRVGK-QFSRVFMFTHKKAGSFNRFVQLETTSGRRLALTSGHMLYVNGIIKAAKEVRVGDRLSLST 415
            G+I D  T    EES  +  D            +CFP  A VE+ DG+ K+M +L IGD + VG  ++S VF+FTH+ +    RFVQL T+SG  + LTSGH LY+NG +  A   R GD +++ +
Sbjct:  632 GSITDSETTDETEESQTSPNDXXXXXXXXXXXXVCFPASASVELRDGSRKRMDELQIGDSILVGPGEYSEVFLFTHRTSRVLYRFVQLTTSSGATVKLTSGHFLYLNGKLAMAGSAREGDEVTVGS 757          
BLAST of Ggra6143.t1 vs. uniprot
Match: A0A7S3EMA0 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EMA0_9RHOD)

HSP 1 Score: 82.8 bits (203), Expect = 1.180e-14
Identity = 44/94 (46.81%), Postives = 60/94 (63.83%), Query Frame = 0
Query:  324 LCFPGDAQVEMIDGTFKQMTDLAIGDEVRV-GKQFSRVFMFTHKKAGSFNRFVQLETTSGRRLALTSGHMLYVNGIIKAAKEVRVGDRLSLSTY 416
            +CFPGDA V M DG+ K MT L  GD V V G +FS VF F HK A +   FV++ET SG  + L+  H + V G +  A+EV VGD+L+++ +
Sbjct:   25 VCFPGDAVVSMADGSKKPMTLLEAGDRVLVAGGKFSDVFAFGHKDASTVAEFVRIETESGHAVELSRSHYILVAGNLVPAREVEVGDQLTVAGF 118          
BLAST of Ggra6143.t1 vs. uniprot
Match: A0A2V3IR48 (Protein hedgehog n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR48_9FLOR)

HSP 1 Score: 79.7 bits (195), Expect = 2.940e-12
Identity = 44/116 (37.93%), Postives = 73/116 (62.93%), Query Frame = 0
Query:  308 EATPDSFGVDVNNGESLCFPGDAQVEMIDGTFKQMTDLAIGDEVRV-GKQFSRVFMFTHKKAGSFNRFVQLETTSGRRLALTSGHMLYVNGIIKAAKEVRVGDRLSLS--TYKLLT 420
            EATP++     +  +S+CFP  A VE+  G  K + D++IGD V V G+ +S V++FTH+ +     F +++ +SG  ++LTS H + V+G +K A+ V VGD L+L   T+ ++T
Sbjct:  430 EATPEA-----DEDDSVCFPESAHVELECGEVKAIGDISIGDRVLVSGRAYSEVYLFTHRDSNVLYNFYRIKVSSGAVISLTSTHYIPVDGRLKTAESVHVGDVLTLGNGTFDVVT 540          
BLAST of Ggra6143.t1 vs. uniprot
Match: A0A5J4YWA1 (Protein hedgehog n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YWA1_PORPP)

HSP 1 Score: 78.2 bits (191), Expect = 1.010e-11
Identity = 48/121 (39.67%), Postives = 69/121 (57.02%), Query Frame = 0
Query:  297 IGTGSNDEESVEATPDSFGVDVNNGESLCFPGDAQVEMIDGTFKQMTDLAIGDEVRVG-KQFSRVFMFTHKKAGSFNRFVQLETTSGRR---LALTSGHMLYVNGIIKAAKEVRVGDRLSL 413
            + +GSND      TP   G   + G  +CFP DA VE+ DG+ + M+ LA+GD VRV   +FS +  F HK A  F +F +L   +  R   L L++ HM+ V+G +K A +V VG+ L L
Sbjct:  501 VTSGSND-----TTPSPVGEPADGG--VCFPADATVELEDGSVRTMSQLAVGDRVRVSDSEFSEIHFFGHKLASGFFKFERLTWRAPGRTGALTLSASHMVLVDGALKRAGDVVVGEHLHL 614          
The following BLAST results are available for this feature:
BLAST of Ggra6143.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A2V3IFE93.280e-14054.29Desert hedgehog protein A n=1 Tax=Gracilariopsis c... [more]
R7QFF21.880e-8941.84HintN domain-containing protein n=1 Tax=Chondrus c... [more]
R7Q6193.770e-2044.03HintN domain-containing protein n=1 Tax=Chondrus c... [more]
A0A7S3AAJ11.280e-1646.32Hypothetical protein n=2 Tax=Eukaryota TaxID=2759 ... [more]
A0A2V3IRZ62.340e-1648.35Indian hedgehog B protein n=1 Tax=Gracilariopsis c... [more]
A0A2V3IKI52.820e-1540.48Tyramine beta-hydroxylase n=1 Tax=Gracilariopsis c... [more]
A0A2V3IKL02.830e-1540.48DBH-like monooxygenase protein 1 n=1 Tax=Gracilari... [more]
A0A7S3EMA01.180e-1446.81Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A2V3IR482.940e-1237.93Protein hedgehog n=1 Tax=Gracilariopsis chorda Tax... [more]
A0A5J4YWA11.010e-1139.67Protein hedgehog n=1 Tax=Porphyridium purpureum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003587Hint domain N-terminalSMARTSM00306hint_7coord: 323..415
e-value: 1.9E-9
score: 47.4
NoneNo IPR availableGENE3D2.170.16.10Hedgehog/Intein (Hint) domaincoord: 325..421
e-value: 1.2E-19
score: 73.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..309
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..242
NoneNo IPR availablePANTHERPTHR46706FAMILY NOT NAMEDcoord: 192..413
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..446
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availableCDDcd00081Hintcoord: 325..411
e-value: 2.61243E-13
score: 64.983
IPR001767Hedgehog protein, Hint domainPFAMPF01079Hintcoord: 323..397
e-value: 5.0E-16
score: 58.8
IPR006141Intein N-terminal splicing regionPROSITEPS50817INTEIN_N_TERcoord: 325..395
score: 10.59149
IPR036844Hint domain superfamilySUPERFAMILY51294Hedgehog/intein (Hint) domaincoord: 325..417

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:654679..656143 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6143.t1Ggra6143.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 654679..656143 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6143.t1 ID=Ggra6143.t1|Name=Ggra6143.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=447bp
MLMATNLGLLVAILSFCGTALGVKSPRVFSESYIEGVYGRFFEFSDEGNS
APCPQVIDHYHRGRPTALGDSWIIPHANIVQSGAKCRDGGVLVLNSYNES
SRMPNVLESNRIAEETFTLMKEESTGFWMGADERRCGKWVFPSRTYIFFV
KEFDRTLTTSFRLTLSPGKKYMFAVADQFTCIYVDIPRTKPVSPVTIATP
GGSTPSASTGPSAEDGTSTDKEPSNGPTPTPTSANTADETDEASADGGQD
STDGDSGSNETDDEGSDPNGGLSIVDVDNGQLPEETEDVAGGTIADIGTG
SNDEESVEATPDSFGVDVNNGESLCFPGDAQVEMIDGTFKQMTDLAIGDE
VRVGKQFSRVFMFTHKKAGSFNRFVQLETTSGRRLALTSGHMLYVNGIIK
AAKEVRVGDRLSLSTYKLLTRCYSPYAPYGMHLAWVLFRTVLTGQA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003587Hint_dom_N
IPR001767Hedgehog_Hint
IPR006141Intein_N
IPR036844Hint_dom_sf