Ggra6135.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6135.t1
Unique NameGgra6135.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length377
Homology
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BLAST of Ggra6135.t1 vs. uniprot
Match: A0A2V3IFD5 (Thioredoxin domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFD5_9FLOR)

HSP 1 Score: 219 bits (559), Expect = 6.630e-64
Identity = 137/383 (35.77%), Postives = 192/383 (50.13%), Query Frame = 0 
Query:   13 QLARVLLSATVTVLLLCSPFSSESECAVRTLSRAASLTTCPSVQYVQYVLRPGESVQAAPRRWLPFGAASHAAVANLTQLPPLFPFVRVFHSQLPPHVHHFGDSLDAFVLARFICDVCGVDVDLPPVLSRDAFARAVRRNALGALLIVPMHQARLQPKHRRLADAILNGALSAASWWELSLVDSLKDELFARRVGDHSLLFVQLGDDKAVLHALSHVTEHNVRALMQRFERLPPRTVLPDAALVADKQLSYFDGVSGARAL----------------------------------TWCAHCQRIMPVYERFARVARASEADVRVLLLQEADALPPFLERLVDGFPTVLRLQQSHGVREVHEYVGQHELHHLMHEHEREQSERL 361
            +L R L + ++TVLLL +P++SE+  A + LSRAA+L  C   QY+ Y LR  E+V    R W  F + S     NL+ +PP FP +RVF +Q  P V  +  + D + LA F+ DVC     L    SRD FA  VRR  +G L++VPM   R +     +A+++ +  +     W   +VDS  D LF R V D SLL V L  D AV+HALS V   +V  L  R E +  +        V    L YF+  + +  L                                  +WCA+CQRI+P Y RF+    +S+ DV VL +   D LP FL+ LVDG+PTVLR++   GV +V E +  H    L+ +H   QS+ L
Sbjct:   62 ELLRALYATSITVLLLTTPYTSETPAAEQALSRAAALVNCSRTQYLSYYLRLNETVLPPRRSW--FFSTSPDPPTNLSFVPPFFPHIRVFKNQQHPVVRDYRGAFDVYSLAAFLADVCDSPRSLLSFSSRDEFAEGVRRGMMGVLMVVPMKNGRFREDDLHVAESV-SDVVQRRKGWVFGVVDSENDVLFLRNVPDRSLLMVDLRRDLAVVHALSDVKTQSVSLLFDRVEGIADKK-RSQHRFVRSSHLKYFEPFASSSPLFDYPTCYISLSSFLRAEYHQQQVEPSVVWVVVYQSWCAYCQRILPTYRRFSSTVSSSDVDVHVLFVDNVDELPSFLDDLVDGYPTVLRIELLRGVMDVRERLYGHRQDLLISDHCDRQSDAL 440
The following BLAST results are available for this feature:
BLAST of Ggra6135.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IFD56.630e-6435.77Thioredoxin domain-containing protein n=1 Tax=Grac... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 274..350
e-value: 2.0E-5
score: 24.5
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 273..365
e-value: 7.5E-7
score: 31.1
NoneNo IPR availableCDDcd02961PDI_a_familycoord: 275..342
e-value: 2.24565E-6
score: 43.7534
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 274..348

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:632035..633285 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6135.t1Ggra6135.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 632035..633285 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6135.t1 ID=Ggra6135.t1|Name=Ggra6135.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=377bp
MGAQVQLAADGAQLARVLLSATVTVLLLCSPFSSESECAVRTLSRAASLT
TCPSVQYVQYVLRPGESVQAAPRRWLPFGAASHAAVANLTQLPPLFPFVR
VFHSQLPPHVHHFGDSLDAFVLARFICDVCGVDVDLPPVLSRDAFARAVR
RNALGALLIVPMHQARLQPKHRRLADAILNGALSAASWWELSLVDSLKDE
LFARRVGDHSLLFVQLGDDKAVLHALSHVTEHNVRALMQRFERLPPRTVL
PDAALVADKQLSYFDGVSGARALTWCAHCQRIMPVYERFARVARASEADV
RVLLLQEADALPPFLERLVDGFPTVLRLQQSHGVREVHEYVGQHELHHLM
HEHEREQSERLLAAERALRLLQAASL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf