Ggra6134.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6134.t1
Unique NameGgra6134.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length206
Homology
BLAST of Ggra6134.t1 vs. uniprot
Match: A0A2V3IFK5 (Staphylococcal-like nuclease CAN1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFK5_9FLOR)

HSP 1 Score: 269 bits (688), Expect = 4.670e-89
Identity = 130/202 (64.36%), Postives = 151/202 (74.75%), Query Frame = 0
Query:    1 MGSCLSICLPADXXXXXXXXXXXXXXXXXXXXXXXXXXXELI-------QQPQHAVPTGAEGKQVIRGAYVFKMPDGDTFNCDYTDASGDKATARVRVMAIDCPETKQNFGQQAKQIGQQLLLRTNVTLYVHTTDRYGRLVADVITSDGVNYGEYLLQQGAAWHYKAYDKREHLAHMETEARNAKIGLWSFPRPLEPWEYRR 195
            MGSCLS+C P++                           + +       QQPQ   P GAEG +VIR AYVFKMPDGDTF CDYTD +G+K TARVR+MAIDCPETKQNFG+QA +IGQQ+LLRTNVTLYVHTTDRYGR+VADVIT DG NYGEY+LQQGAAWHYKAYDKR++LA +E +A+ A++GLWSFPRPLEPWEYRR
Sbjct:    1 MGSCLSLCFPSEKPQQQAQHEPPAQSTLSYAAAVAQTAAQAVADVIKTPQQPQP--PPGAEGMRVIRNAYVFKMPDGDTFTCDYTDTNGEKQTARVRIMAIDCPETKQNFGKQASEIGQQVLLRTNVTLYVHTTDRYGRVVADVITQDGRNYGEYMLQQGAAWHYKAYDKRQNLADLEEQAKQARVGLWSFPRPLEPWEYRR 200          
BLAST of Ggra6134.t1 vs. uniprot
Match: uncharacterized endonuclease-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D38D5 (uncharacterized endonuclease-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D38D5)

HSP 1 Score: 157 bits (398), Expect = 3.160e-45
Identity = 78/157 (49.68%), Postives = 104/157 (66.24%), Query Frame = 0
Query:   42 IQQPQHA-VP-TGAEGKQ-VIRGAYVFKMPDGDTFNCDYTDASGDKATARVRVMAIDCPETKQNFGQQAKQIGQQLLLRTNVTLYVHTTDRYGRLVADVITSDGVNYGEYLLQQGAAWHYKAYDKREHLAHMETEARNAKIGLWSFPRPLEPWEYRR 195
            + +P HA VP + A G Q  I  A V ++PDGDTF  +Y    G    ARVR+M IDCPE  Q FG +A+ IG+ ++    VTL VHTTD+YGRLVAD+ T  G +YG+ +L+ GAAWHY  YD R+ LA +  +A+ A+ GLW++P P  PW+YRR
Sbjct:   38 LDKPSHAGVPQSSAHGVQYTIEDARVVRVPDGDTFYVEYAGPDGRLVEARVRLMGIDCPEKAQEFGLEARNIGRGMVQGRTVTLLVHTTDQYGRLVADIHTEAGQDYGQEMLRAGAAWHYTHYDNRQELASLMQDAKAARRGLWAYPNPQPPWDYRR 194          
BLAST of Ggra6134.t1 vs. uniprot
Match: thermonuclease family protein n=1 Tax=Pedobacter sp. SYSU D00823 TaxID=2810309 RepID=UPI001A9649FE (thermonuclease family protein n=1 Tax=Pedobacter sp. SYSU D00823 TaxID=2810309 RepID=UPI001A9649FE)

HSP 1 Score: 120 bits (301), Expect = 1.080e-30
Identity = 61/139 (43.88%), Postives = 83/139 (59.71%), Query Frame = 0
Query:   57 QVIRGAYVFKMPDGDTFNCDYTDASGDKATARVRVMAIDCPETKQNFGQQAKQIGQQLLLRTNVTLYVHTTDRYGRLVADVITSDGVNYGEYLLQQGAAWHYKAYDKREHLAHMETEARNAKIGLWSFPRPLEPWEYRR 195
            ++I+G  V  + DGDTF    T  + DK   ++R+  +DCPE KQ+FG +AKQ    L     V   V   DRYGR +A VI  DG    + LL  G AWHYK YDK E  A +E +A+ +KIG+WS P P+ PW++R+
Sbjct:   20 KLIKGKVV-SIADGDTF----TILTEDKEQVKIRLYGVDCPEKKQDFGTKAKQFTSNLCFGKAVNAQVKNNDRYGRKIALVILPDGRIVNKELLTAGMAWHYKHYDKSEEFALLELKAKKSKIGIWSAPNPVAPWDFRK 153          
BLAST of Ggra6134.t1 vs. uniprot
Match: A0A1E4HZ41 (TNase-like domain-containing protein n=1 Tax=Planctomycetes bacterium SCN 63-9 TaxID=1660165 RepID=A0A1E4HZ41_9BACT)

HSP 1 Score: 117 bits (294), Expect = 1.830e-29
Identity = 63/133 (47.37%), Postives = 81/133 (60.90%), Query Frame = 0
Query:   64 VFKMPDGDTFNCDYTDASGDKATARVRVMAIDCPETKQNFGQQAKQIGQQLLLRTNVTLYVHTTDRYGRLVADVITSDGVNYGEYLLQQGAAWHYKAYDKREH-LAHMETEARNAKIGLWSFPRPLEPWEYRR 195
            V  + DGDT     T  +G K   RVR+  ID PE+ Q+FGQ+AKQ    L     VT+ VHTTDRYGR VA++I  DG +    L++ G AW Y+ Y   +  LA +E EA+ AK GLWS P P+ PWE+RR
Sbjct:   28 VVGVSDGDTV----TVLTGAKQQVRVRLWGIDAPESGQDFGQRAKQAASDLAFGRQVTVKVHTTDRYGRTVAEIILPDGRSLNRELVRSGWAWWYRQYAPADRELASLEAEAKAAKRGLWSGPNPVAPWEWRR 156          
BLAST of Ggra6134.t1 vs. uniprot
Match: thermonuclease family protein n=2 Tax=Flavobacteriaceae TaxID=49546 RepID=UPI001F2F1B6D (thermonuclease family protein n=2 Tax=Flavobacteriaceae TaxID=49546 RepID=UPI001F2F1B6D)

HSP 1 Score: 116 bits (290), Expect = 5.020e-29
Identity = 61/133 (45.86%), Postives = 76/133 (57.14%), Query Frame = 0
Query:   64 VFKMPDGDTFNCDYTDASGDKATARVRVMAIDCPETKQNFGQQAKQIGQQLLLRTNVTLYVH-TTDRYGRLVADVITSDGVNYGEYLLQQGAAWHYKAYDKREHLAHMETEARNAKIGLWSFPRPLEPWEYRR 195
            V  + DGDTF   Y     D    R+R+  IDCPE+KQ FG  AK+    L     VT+      DRYGR+V  VIT +G+N  E L++ G AWHYK Y   E LA ME EAR  K+GLW+  RP  PW +R+
Sbjct:   66 VVSIKDGDTFEVLY-----DGLAERIRLAEIDCPESKQAFGNVAKKYASDLCFGQTVTVESGGKRDRYGRVVGTVITDNGINVNESLVKAGLAWHYKDYSDSEELAQMEQEARANKVGLWADKRPTAPWNWRK 193          
BLAST of Ggra6134.t1 vs. uniprot
Match: A0A8F9RFT3 (Thermonuclease family protein n=1 Tax=Flavobacterium sp. WSW3-B6 TaxID=2856519 RepID=A0A8F9RFT3_9FLAO)

HSP 1 Score: 115 bits (288), Expect = 1.080e-28
Identity = 61/133 (45.86%), Postives = 78/133 (58.65%), Query Frame = 0
Query:   64 VFKMPDGDTFNCDYTDASGDKATARVRVMAIDCPETKQNFGQQAKQIGQQLLLRTNVTLYVH-TTDRYGRLVADVITSDGVNYGEYLLQQGAAWHYKAYDKREHLAHMETEARNAKIGLWSFPRPLEPWEYRR 195
            V  + DGDTF+  Y     +    RVR+  IDCPE KQ FG+ AK+    L     VT+      DRYGR+V  VIT +G+N  E L+Q G AWHYK Y   + LA ME +AR  K+GLWS   P+ PW+YR+
Sbjct:   67 VVGISDGDTFDVLY-----EGYAERVRLAEIDCPEKKQAFGKAAKKYASDLCFGKIVTVASGGKRDRYGRVVGTVITKEGINVNEALIQAGLAWHYKDYSDSDALAEMENKARVEKVGLWSAKNPVAPWQYRK 194          
BLAST of Ggra6134.t1 vs. uniprot
Match: A0A6L4Z8H3 (TNase-like domain-containing protein n=1 Tax=Prolixibacteraceae bacterium TaxID=2053594 RepID=A0A6L4Z8H3_9BACT)

HSP 1 Score: 113 bits (283), Expect = 1.470e-28
Identity = 57/132 (43.18%), Postives = 78/132 (59.09%), Query Frame = 0
Query:   64 VFKMPDGDTFNCDYTDASGDKATARVRVMAIDCPETKQNFGQQAKQIGQQLLLRTNVTLYVHTTDRYGRLVADVITSDGVNYGEYLLQQGAAWHYKAYDKREHLAHMETEARNAKIGLWSFPRPLEPWEYRR 195
            V K+ DGDT        + DK   ++R+  IDCPE+ Q+FG +AKQ   +L     V +     D+YGR +  V+  D VN  E LL+ G  WHYK Y+K E LA +E +AR  K+GLWS P P+ PW++RR
Sbjct:   22 VIKITDGDTI----VVLTDDKEQIKIRLEGIDCPESSQDFGTKAKQATSELCFGKQVKIIKSGEDKYGRTLGYVLVGD-VNVNEELLRLGMDWHYKQYNKDEELAKIEMQARTKKVGLWSQPNPVAPWDFRR 148          
BLAST of Ggra6134.t1 vs. uniprot
Match: thermonuclease family protein n=1 Tax=Winogradskyella aurantiaca TaxID=2219558 RepID=UPI000E1C9ABC (thermonuclease family protein n=1 Tax=Winogradskyella aurantiaca TaxID=2219558 RepID=UPI000E1C9ABC)

HSP 1 Score: 113 bits (283), Expect = 1.950e-28
Identity = 58/133 (43.61%), Postives = 77/133 (57.89%), Query Frame = 0
Query:   62 AYVFKMPDGDTFNCDYTDASGDKATARVRVMAIDCPETKQNFGQQAKQIGQQLLLRTNVTLYVHTTDRYGRLVADVITSDGVNYGEYLLQQGAAWHYKAYDKREHLAHMETEARNAKIGLWSFPRPLEPWEYR 194
            A V  + DGDT      D++    T ++R++ IDCPE KQ F  +AKQ     +   NV + V  TDRYGRLVA++I    +N  + LL+ G AWHY+ Y     L  +E EAR  KIGLWS P  + PW+YR
Sbjct:   24 AKVIGITDGDTVKVLKLDST----TVKIRLVNIDCPERKQAFSTKAKQFTSDAVFSKNVRIEVIKTDRYGRLVANIIYDQDLNLSKELLKAGLAWHYQKYSNDASLQQLEDEARAQKIGLWSDPHAIAPWQYR 152          
BLAST of Ggra6134.t1 vs. uniprot
Match: A0A4P5U5F7 (Endonuclease n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A4P5U5F7_9BACT)

HSP 1 Score: 112 bits (280), Expect = 5.180e-28
Identity = 54/126 (42.86%), Postives = 72/126 (57.14%), Query Frame = 0
Query:   69 DGDTFNCDYTDASGDKATARVRVMAIDCPETKQNFGQQAKQIGQQLLLRTNVTLYVHTTDRYGRLVADVITSDGVNYGEYLLQQGAAWHYKAYDKREHLAHMETEARNAKIGLWSFPRPLEPWEYR 194
            DGD+F    T  +      ++R+  +DCPE KQ++GQ+AKQ     +    VT+     DRYGR +  V  ++G    E LLQ G AWHYK YD   + A +ET ARNAK GLW+   P+ PW YR
Sbjct:   33 DGDSF----TLLAPGNVEMKIRLHGVDCPELKQDYGQRAKQFTSSQIFGKTVTVKSSKKDRYGRTIGTVYLANGQILNELLLQNGLAWHYKKYDSNAYWAQLETNARNAKRGLWAISNPIPPWTYR 154          
BLAST of Ggra6134.t1 vs. uniprot
Match: thermonuclease family protein n=1 Tax=Ornithobacterium rhinotracheale TaxID=28251 RepID=UPI001C87A4AB (thermonuclease family protein n=1 Tax=Ornithobacterium rhinotracheale TaxID=28251 RepID=UPI001C87A4AB)

HSP 1 Score: 112 bits (281), Expect = 8.990e-28
Identity = 61/151 (40.40%), Postives = 85/151 (56.29%), Query Frame = 0
Query:   46 QHAVPTGAEGKQVIRGAYVFKMPDGDTFNCDYTDASGDKATARVRVMAIDCPETKQNFGQQAKQIGQQLLLRTNVTLYVH-TTDRYGRLVADVITSDGVNYGEYLLQQGAAWHYKAYDKREHLAHMETEARNAKIGLWSFPRPLEPWEYRR 195
            + ++P GA  K       V  + DGDT          D    +VR+  IDCPE KQ FG  AK+    L+   NV L  +   DRYGRL+A++IT DG+N  + L+++G AWH+K Y K +  A +E EAR  K+GLW  P P+ PW +R+
Sbjct:   37 KQSIPQGAAFK-------VIGVIDGDTVKLLI-----DGLEQKVRLAHIDCPEKKQAFGNVAKKAISDLIFGKNVYLVWNGERDRYGRLIAEIITEDGINVNKLLVKKGLAWHFKKYSKNQDYAQLEIEARQNKVGLWVDPNPIPPWIFRQ 175          
The following BLAST results are available for this feature:
BLAST of Ggra6134.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFK54.670e-8964.36Staphylococcal-like nuclease CAN1 n=1 Tax=Gracilar... [more]
uncharacterized endonuclease-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D38D53.160e-4549.68uncharacterized endonuclease-like n=1 Tax=Mercenar... [more]
thermonuclease family protein n=1 Tax=Pedobacter sp. SYSU D00823 TaxID=2810309 RepID=UPI001A9649FE1.080e-3043.88thermonuclease family protein n=1 Tax=Pedobacter s... [more]
A0A1E4HZ411.830e-2947.37TNase-like domain-containing protein n=1 Tax=Planc... [more]
thermonuclease family protein n=2 Tax=Flavobacteriaceae TaxID=49546 RepID=UPI001F2F1B6D5.020e-2945.86thermonuclease family protein n=2 Tax=Flavobacteri... [more]
A0A8F9RFT31.080e-2845.86Thermonuclease family protein n=1 Tax=Flavobacteri... [more]
A0A6L4Z8H31.470e-2843.18TNase-like domain-containing protein n=1 Tax=Proli... [more]
thermonuclease family protein n=1 Tax=Winogradskyella aurantiaca TaxID=2219558 RepID=UPI000E1C9ABC1.950e-2843.61thermonuclease family protein n=1 Tax=Winogradskye... [more]
A0A4P5U5F75.180e-2842.86Endonuclease n=1 Tax=Bacteroidetes bacterium TaxID... [more]
thermonuclease family protein n=1 Tax=Ornithobacterium rhinotracheale TaxID=28251 RepID=UPI001C87A4AB8.990e-2840.40thermonuclease family protein n=1 Tax=Ornithobacte... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016071Staphylococcal nuclease (SNase-like), OB-foldSMARTSM00318SNASE_2coord: 55..184
e-value: 1.2E-21
score: 87.9
IPR016071Staphylococcal nuclease (SNase-like), OB-foldPFAMPF00565SNasecoord: 88..183
e-value: 1.3E-21
score: 77.1
IPR016071Staphylococcal nuclease (SNase-like), OB-foldPROSITEPS50830TNASE_3coord: 62..184
score: 27.456638
IPR035437SNase-like, OB-fold superfamilyGENE3D2.40.50.90coord: 55..185
e-value: 1.1E-30
score: 108.5
IPR035437SNase-like, OB-fold superfamilySUPERFAMILY50199Staphylococcal nucleasecoord: 62..191
NoneNo IPR availablePANTHERPTHR12302:SF3SERINE/THREONINE-PROTEIN KINASE 31coord: 29..197
NoneNo IPR availablePANTHERPTHR12302EBNA2 BINDING PROTEIN P100coord: 29..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:630921..631623 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6134.t1Ggra6134.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 630921..631623 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6134.t1 ID=Ggra6134.t1|Name=Ggra6134.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=206bp
MGSCLSICLPADKPQQQPQQQSPLSYAAAVAQTAAQTVSELIQQPQHAVP
TGAEGKQVIRGAYVFKMPDGDTFNCDYTDASGDKATARVRVMAIDCPETK
QNFGQQAKQIGQQLLLRTNVTLYVHTTDRYGRLVADVITSDGVNYGEYLL
QQGAAWHYKAYDKREHLAHMETEARNAKIGLWSFPRPLEPWEYRRRKRNN
NNNNK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016071Staphylococal_nuclease_OB-fold
IPR035437SNase_OB-fold_sf