Ggra6131.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6131.t1
Unique NameGgra6131.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length685
Homology
BLAST of Ggra6131.t1 vs. uniprot
Match: A0A2V3IFF1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFF1_9FLOR)

HSP 1 Score: 670 bits (1729), Expect = 4.070e-231
Identity = 368/762 (48.29%), Postives = 477/762 (62.60%), Query Frame = 0
Query:    1 MLYSDHVVFHVGAQKLKNAGPNTTYRPKGFFSSSNSTALLHMVNPYIRRAKNSFRRLKFSTRFAVFPIALSILVAFFVSS-------------NTISPSLTIEPHFKPSSND----STEYTNWEMKGT------DFGMNGEKTLQDSKL-------VYAHDSRPNT----------SG-------------------------------PLHSALTPSTKPNT-----VIDDKNHHPSLSLDKEPKITTPAENHASHQ----SKQKSRIHNRESHVMSATAKKPSNGKKSNDAISTPPRHPHEKTSQSNIGHKHRRFHFDETSFSELPDGKPLIDKEFTAFKPTRSRTTDVRLISLQNVCYCTQRNKFLVPRLSRDRKTRFPGYLYRYGAALSVSWKRKSQILASPDQKVVHIDGTTIIWRGRSIHSYTNHLQPSLIPMRSLLDTLKKTKYTGNVRVAAESFTPSAGQEIVVRKAYDYFLGDVPEENRIELARLRPRLLCFERVLALGSEFEGHAKSVESYEAVKGLIEKHEGSALKGKLARTCKDVGTTKKTIWVLERQEQHTHAGTVSNSAEVREAIQHELVKAHIDDKVDIQFIQSPSLPCPKGTKRAGCFDSMCSRDEHIRNGAEDQHCHHHPSILPEALTFNKMTFLVTVTGRVNEGVIYMPRGAQVIEVLPHGILDHSFESLAKDARLKHYRLENRHFKNTELLMYDRFGDVARNLHSCWADLECREFRRTRATHIDVHHLKLLVRKALVDWKKTC 682
            MLYSDHV +HVG  +  +         +G F +S S A L+MVNPY+RRAKNS +RL+ S R A+ PI LSI +AF +S+             +T S S  I  H+  +  D    +     WE+  T      D G     T  D K        +++  S P+           SG                               P HS+L      N       ++D+    +LSL     +  P  + +SHQ    ++ +    N  +H       KP   K  ++  S  P  P+   ++ +  HK   F  +ET+F ELP  + L++KEF  FKP   R TDVR+I+L++VCYCT+RNKFLVPR S+D+KT+FPGYLYRYGAALSVSW R+  ILASPDQKVVH  GTTI+WRGRSIH+Y  HL  SLIP+RSLLD L+KT Y+ +V+VAAESFTP   QE VVRKA++YFLGDVPE+NRIEL R+RPRLLCFE  L+ G+E+EGHA SVESY+ +KGLIEKHE S  K +L R CKD   +KKTIW++ERQ  H H GT+SN+  V+EA++HEL KA +   VDIQFIQ+PS+PCP GT RAGC+ S+C +     N AE Q C  HP ILPE LT+N+MTFL+T++G  NEGV+YMPRG+ ++EV P+G+L +S E LAKDA L HYR+ENR F++TE  ++D+FGD+AR+ HSCWADLECREFR  +ATH+DVHHLK+L+RK L  WK TC
Sbjct:    1 MLYSDHVAYHVGVHRAADTQLEAALSREGVFLTSQSKAFLYMVNPYLRRAKNSLQRLRLSNRSALIPIFLSIGIAFLLSARARAPTPKPADYYHTASASTHIGEHYDTNGQDEPLDNVYGGQWELYDTEKLSQRDNGHKSISTPPDMKQNSHSGSDIHSFGSPPSNHVYRQSGHQESGHSAVPEHDKHRAKHPTYDRLVREVAGHLRVHPTHSSLHRRVPHNAKYGYKTVEDR----ALSLGLADNLKNPPNHLSSHQYFASTENQKDTQNGVTHNTHHDHNKP---KHRSNPTSHTPNAPNAHGNKQHSIHKSPHFKINETTFKELPQTELLLEKEFLLFKPLNYRRTDVRVIALKHVCYCTRRNKFLVPRFSKDKKTKFPGYLYRYGAALSVSWNRRKSILASPDQKVVHFSGTTILWRGRSIHTYNQHLHRSLIPIRSLLDVLRKTNYSIDVKVAAESFTPPTEQETVVRKAHEYFLGDVPEQNRIELGRIRPRLLCFENALSFGAEYEGHAASVESYDNIKGLIEKHERSTSKMELTRKCKDASGSKKTIWIMERQHVHGHEGTMSNAPAVKEAVEHELKKAGLASAVDIQFIQAPSIPCPHGTSRAGCYGSICDKRNGKWNNAESQRCRRHPEILPEVLTYNRMTFLITLSGSANEGVVYMPRGSHILEVAPYGVLGNSLERLAKDAHLSHYRMENRAFRDTETHIFDQFGDIARSAHSCWADLECREFRLRQATHVDVHHLKMLLRKTLGFWKATC 755          
The following BLAST results are available for this feature:
BLAST of Ggra6131.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IFF14.070e-23148.29Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..230
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..230
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..174
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 79..684
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..58
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..78
NoneNo IPR availableTMHMMTMhelixcoord: 59..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:624398..626452 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6131.t1Ggra6131.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 624398..626452 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6131.t1 ID=Ggra6131.t1|Name=Ggra6131.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=685bp
MLYSDHVVFHVGAQKLKNAGPNTTYRPKGFFSSSNSTALLHMVNPYIRRA
KNSFRRLKFSTRFAVFPIALSILVAFFVSSNTISPSLTIEPHFKPSSNDS
TEYTNWEMKGTDFGMNGEKTLQDSKLVYAHDSRPNTSGPLHSALTPSTKP
NTVIDDKNHHPSLSLDKEPKITTPAENHASHQSKQKSRIHNRESHVMSAT
AKKPSNGKKSNDAISTPPRHPHEKTSQSNIGHKHRRFHFDETSFSELPDG
KPLIDKEFTAFKPTRSRTTDVRLISLQNVCYCTQRNKFLVPRLSRDRKTR
FPGYLYRYGAALSVSWKRKSQILASPDQKVVHIDGTTIIWRGRSIHSYTN
HLQPSLIPMRSLLDTLKKTKYTGNVRVAAESFTPSAGQEIVVRKAYDYFL
GDVPEENRIELARLRPRLLCFERVLALGSEFEGHAKSVESYEAVKGLIEK
HEGSALKGKLARTCKDVGTTKKTIWVLERQEQHTHAGTVSNSAEVREAIQ
HELVKAHIDDKVDIQFIQSPSLPCPKGTKRAGCFDSMCSRDEHIRNGAED
QHCHHHPSILPEALTFNKMTFLVTVTGRVNEGVIYMPRGAQVIEVLPHGI
LDHSFESLAKDARLKHYRLENRHFKNTELLMYDRFGDVARNLHSCWADLE
CREFRRTRATHIDVHHLKLLVRKALVDWKKTCEL*
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