Ggra6129.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6129.t1
Unique NameGgra6129.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length308
Homology
BLAST of Ggra6129.t1 vs. uniprot
Match: A0A2V3IFH3 (Putative rRNA methyltransferase YlbH n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFH3_9FLOR)

HSP 1 Score: 295 bits (756), Expect = 3.620e-98
Identity = 139/181 (76.80%), Postives = 161/181 (88.95%), Query Frame = 0
Query:  124 MAKVREAVFSMLDTLDALPKNGICLDLFAGCGSVGIEALSRGMNRAIFVDYSRACVDSINDNLATCNFDDRSLAVCSRVEEFLRDGTKYNYGKHYDLITITPPYEEVDYSQLMKSVAESDCVGEQTFVVVEYPVELRTFPPSLGNRLVGIRNRRYGRTVIAIYACQPDVDIELRPDEFISV 304
            MAKVREAVFSML   DAL ++G CLDLFAGCGSVGIEALSRGM +A+FVDYSR CV SI+ NLA C F +R L VCSRVE+F++DG +YN G+HYDLITITPPYEEVDY +LMK V+ES+CVGE TFVVVEYPVEL +FPPS+G+RLVG+RNRRYGRTVIA+YACQPDVDIELRP+EF+S+
Sbjct:    1 MAKVREAVFSMLYMQDALRRDGTCLDLFAGCGSVGIEALSRGMEQAVFVDYSRECVQSIDANLANCEFAERGLTVCSRVEQFVKDGERYNNGRHYDLITITPPYEEVDYGKLMKMVSESNCVGEGTFVVVEYPVELGSFPPSIGHRLVGVRNRRYGRTVIAVYACQPDVDIELRPEEFVSL 181          
BLAST of Ggra6129.t1 vs. uniprot
Match: R7QRG5 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRG5_CHOCR)

HSP 1 Score: 286 bits (732), Expect = 1.580e-92
Identity = 134/223 (60.09%), Postives = 175/223 (78.48%), Query Frame = 0
Query:   55 SVDDEPSSGKVYAPRQQRGGGRRFRGFVRSQGKKLVSERLPPNPPGLRIASGSVKGRRIRSPNVYLRPMMAKVREAVFSMLDTLDALPKNGICLDLFAGCGSVGIEALSRGMNRAIFVDYSRACVDSINDNLATCNFDDRSLAVCSRVEEFLRDGTKYNYGKHYDLITITPPYEEVDYSQLMKSVAESDCVGEQTFVVVEYPVELRTFPPSLGNRLVGIRNRR 277
            S +D+ ++ K+ APR+QRGGGR  RG VR QGK    + LPP PPGLR++SG+ +GR+I+SPNVYLRPMMAKVREA+FSML+    L  + + LDLFAG GS+GIE+LSRGM RA+FVD +  C ++I +NL  C FD +   VC+RVE F+++G K N  +HY+LIT+TPPYEEV+YS LM ++A SDCVGE TFVVVEYPVEL++ PP +G+RL+G+RNRR
Sbjct:   88 STEDKWTTEKIRAPRRQRGGGRERRGSVRIQGKYYRPKALPPQPPGLRVSSGTARGRKIKSPNVYLRPMMAKVREALFSMLEMFQVLRSDCVTLDLFAGSGSIGIESLSRGMGRAVFVDAAHECTETIEENLINCRFDAQGQTVCARVENFVKNGAKLNNNQHYNLITVTPPYEEVNYSDLMTAIALSDCVGEDTFVVVEYPVELKSLPPVIGHRLIGLRNRR 310          
BLAST of Ggra6129.t1 vs. uniprot
Match: A0A6T6ADP0 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6ADP0_9RHOD)

HSP 1 Score: 260 bits (665), Expect = 4.140e-81
Identity = 132/250 (52.80%), Postives = 177/250 (70.80%), Query Frame = 0
Query:   62 SGKVYAPRQQR------GGGRRFR---GFVRSQGKKLVSERLPPNPPGLRIASGSVKGRRIRSPNVYLRPMMAKVREAVFSMLDTLDALPKNGICLDLFAGCGSVGIEALSRGMNRAIFVDYSRACVDSINDNLATCNFDDRSLAVCSRVEEFLRDGTKYNYGKHYDLITITPPYEEVDYSQLMKSVAESDCVGEQTFVVVEYPVELRTFPPSLGNRLVGIRNRRYGRTVIAIYACQPDVDIELRPDEFI 302
            +G++ APR+ R      GG  + +   G  R QGK +    +PP    LR+  G+++GRR+RSP+VY+RPMM +VREA+FSML  LDA+   G  LD F+G G+VGIEALSRGM+ A F+D+SR CV++   NLA C    R   VC+RVE+   + T++      D+I++TPPYEEVDY QL+  +A SD VGE T +VVEYP+EL+T PPSL +R+VG+RNRRYGRTV+A+YACQPDVD+  RP+EFI
Sbjct:  169 TGRIVAPRRSRYGLPVTGGKEKDKSSLGRGRVQGKPVEGYYVPPQ---LRVMGGALRGRRLRSPSVYMRPMMGRVREALFSMLTQLDAVKNGGRFLDCFSGSGAVGIEALSRGMSTATFIDFSRDCVEATEANLAHCGLRARGTTVCARVEDVFANPTRFGLYDPIDVISVTPPYEEVDYGQLLTLMASSDLVGEGTHLVVEYPIELKTLPPSLVHRMVGLRNRRYGRTVVAVYACQPDVDVRPRPEEFI 415          
BLAST of Ggra6129.t1 vs. uniprot
Match: A0A7S1ESE5 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ESE5_9RHOD)

HSP 1 Score: 255 bits (651), Expect = 2.200e-80
Identity = 134/254 (52.76%), Postives = 173/254 (68.11%), Query Frame = 0
Query:   55 SVDDEPS-------SGKVYAPRQQRGGGRRFRGFVRSQGKKLVSERLPPNPPGLRIASGSVKGRRIRSPNVYLRPMMAKVREAVFSMLDTLDALPKNGICLDLFAGCGSVGIEALSRGMNRAIFVDYSRACVDSINDNLATCNFDDRSLAVCSRVEEFLRDGTKYNYGKHYDLITITPPYEEVDYSQLMKSVAESDCVGEQTFVVVEYPVELRTFPPSLGNRLVGIRNRRYGRTVIAIYACQPDVDIELRPDEF 301
            S+DD P        +GK+ APR+   G ++    +R+QG+ L           LRI  GS KGR+I SP+VYLRPMM KVREA+FSML+  D L      LDL++G GSV IEALSRG+  A+FVD+S +    I+ NLA C F +R  +VC++VE+ L++   +   +H+DL+TITPPYEEVDY +L+ S+A+SDCVGE T VV+EYPVEL T P  + NRL+G+RNRRYGRTVIAIYACQP  D E R  EF
Sbjct:   56 SLDDIPQEAEADWRTGKIDAPRRGVVGAKKAN--IRTQGRPLQRGVPEKKRNVLRIFGGSAKGRKIISPDVYLRPMMGKVREALFSMLNEFDLLRPENSALDLYSGSGSVCIEALSRGIGSAVFVDFSHSSTQVIDGNLAACGFTERGRSVCAKVEDVLKEPQIHGIRRHFDLVTITPPYEEVDYGELITSIAQSDCVGEGTHVVIEYPVELGTLPSVIMNRLIGMRNRRYGRTVIAIYACQPSTDYEPRSSEF 307          
BLAST of Ggra6129.t1 vs. uniprot
Match: A0A7S1TKC5 (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKC5_9RHOD)

HSP 1 Score: 251 bits (642), Expect = 5.020e-79
Identity = 133/248 (53.63%), Postives = 169/248 (68.15%), Query Frame = 0
Query:   54 SSVDDEPSSGKVYAPRQQRGGGRRFRGFVRSQGKKLVSERLPPNPPGLRIASGSVKGRRIRSPNVYLRPMMAKVREAVFSMLDTLDALPKNGICLDLFAGCGSVGIEALSRGMNRAIFVDYSRACVDSINDNLATCNFDDRSLAVCSRVEEFLRDGTKYNYGKHYDLITITPPYEEVDYSQLMKSVAESDCVGEQTFVVVEYPVELRTFPPSLGNRLVGIRNRRYGRTVIAIYACQPDVDIELRPDEF 301
            S V  +  +GKV APR+   G   ++  V +QG+ L   +       LR+  GS KGR+IRSP VY RPMM KVREA+FSML   + L ++   LDL++G GSV IEALSRG+  A+FVDYS      I+DNLA C F  R  +VC+ VE+ LRD   +   +  DLIT+TPPYEEVDY +L+ S+A+SDCVGE TF+V+EYPVELR  PP + +RL+G+RNRRYGRT +AIYACQP  D E R DEF
Sbjct:   65 SEVGADWRAGKVSAPRKGVVGA--YKAEVNAQGRLLRGVKQQQLNV-LRVFGGSAKGRKIRSPEVYHRPMMGKVREALFSMLADFEVLREDCAALDLYSGSGSVCIEALSRGIGSAVFVDYSAESAAVIDDNLAVCGFGTRGRSVCASVEDVLRDPAPFGIDRPLDLITVTPPYEEVDYGELITSIAQSDCVGEGTFIVIEYPVELRALPPVVMSRLIGMRNRRYGRTALAIYACQPGQDFEPRHDEF 309          
BLAST of Ggra6129.t1 vs. uniprot
Match: A0A7S1H813 (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H813_HEMAN)

HSP 1 Score: 243 bits (619), Expect = 2.140e-76
Identity = 127/248 (51.21%), Postives = 172/248 (69.35%), Query Frame = 0
Query:   59 EPSSGKVYAPRQQRGG-GRRFRGFVRSQGKKLVSERLPPNPPGLRIASGSVKGRRIRSPNVYLRPMMAKVREAVFSMLDTLDALPKNGICLDLFAGCGSVGIEALSRGMNRAIFVDYSRACVDSINDNLATCNFDDRSLAVCSRVEEFLRDGTKYNYG---KHYDLITITPPYEEVDYSQLMKSVAESDCV-GEQTFVVVEYPVELRTFPPSLGNRLVGIRNRRYGRTVIAIYACQPDVDIELRPDEF 301
            E  + KV A RQ+RGG     R  V++QGKK   + + P PP +R+++GS KGR+++SP+VYLRPMM KV+EA+FS L   D L +     D FAGCGSVGIEALS+G+ RAIFVDYS+   + I +NLA C FD+R+L +CS+ E F     +          D+++ITPPYEEV YS L+  VAE+D + G+ +FVVVEYPVEL   PP +G R+VG++NR+YGRT++AIY  +P VD+  RP+EF
Sbjct:    2 EGKTDKVVADRQRRGGKSTGTRQTVKTQGKKW--DTVKPTPPTIRVSTGSAKGRKLKSPDVYLRPMMGKVKEALFSFLREWDVLQEESTFCDTFAGCGSVGIEALSQGVGRAIFVDYSKEACNVIGENLALCGFDERALVICSKAESFYTSPERALARIERPRVDVLSITPPYEEVVYSDLLTMVAEADALLGDGSFVVVEYPVELGLLPPVIGGRMVGMKNRKYGRTMLAIYCIRPGVDLYPRPEEF 247          
BLAST of Ggra6129.t1 vs. uniprot
Match: A0A5J4YUW6 (Putative rRNA methyltransferase YlbH n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUW6_PORPP)

HSP 1 Score: 242 bits (617), Expect = 2.960e-75
Identity = 130/263 (49.43%), Postives = 175/263 (66.54%), Query Frame = 0
Query:   41 RRVPPEGLREEATSSVDDEPSSGKVYAPRQQRGGGRRFRGFVRSQGKKLVSERLPPNPPG-LRIASGSVKGRRIRSPNVYLRPMMAKVREAVFSMLDTLDALPKNGICLDLFAGCGSVGIEALSRGMNRAIFVDYSRACVDSINDNLATCNFDDRSLAVCSRVEEFLRDGTKYNYGKHYDLITITPPYEEVDYSQLMKSVAESDCVGEQTFVVVEYPVELRTFPPSLGNRLVGIRNRRYGRTVIAIYACQPDVDIELRPDEFI 302
            RR    G   +     D++   G+V APR+   G +R     R QG+ L    +P      LR+  G+ KGR+I SP VY RPMM KVREA+FS+L   D L      LDL++G GSV IEALSRG   A FVD+S +   +I +NL  C F +R +A+C++VE+ L+   ++   +H DLIT+TPPYEEVDY +L+ ++A+SDCVGE +FVVVEYP+EL + PP + +RL+G+RNR+YGRTV+AIYACQP VD+E R DEFI
Sbjct:   52 RRQDGRGADVDRVERADEDFRLGRVKAPRRGVVGAKRAN--TREQGRLLRG--VPEKKLNVLRVFGGTAKGRKIMSPEVYHRPMMGKVREALFSILYDFDVLRPECSALDLYSGSGSVCIEALSRGTGFAHFVDFSESSCSAIAENLERCQFAERGVAICAKVEDVLQRPREFGIERHADLITVTPPYEEVDYGELLVALAKSDCVGEGSFVVVEYPIELGSLPPVVMDRLIGMRNRKYGRTVLAIYACQPPVDMEPRQDEFI 310          
BLAST of Ggra6129.t1 vs. uniprot
Match: L1JRE4 (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JRE4_GUITC)

HSP 1 Score: 241 bits (616), Expect = 5.860e-75
Identity = 130/275 (47.27%), Postives = 179/275 (65.09%), Query Frame = 0
Query:   37 ISAKRRVPPEGLREEA---TSSVDDE--PSSGKVY-APRQQRGGGRRFRGFVRSQGKKLVSERLPPNPPGLRIASGSVKGRRIRSPNVYLRPMMAKVREAVFSMLDTLDALPKNGICLDLFAGCGSVGIEALSRGMNRAIFVDYSRACVDSINDNLATCNFDDRSLAVCSRVEEFLRDGTKYNY---GKHYDLITITPPYEEVDYSQLMKSVAESD-CVGEQTFVVVEYPVELRTFPPSLGNRLVGIRNRRYGRTVIAIYACQPDVDIELRPDEF 301
            ++ KR VP     +++   +  VD +  P  G++    RQ RG     RG V+ QGK    + + P PP +R+A G+ KGR++  P VYLRPMM KV+EA+FS+L   D L  + I LD FAGCGSVGIEALSRG+ +A+FVDYS+   ++I  NL  C F+DR + VCS+ E    D  +      GK +DL+T+TPPYEEVDY  L+  + +S+  + +   VVVEYP+EL + PP +GNRLVG+RNR+YGRT++AIYAC P  ++E RP EF
Sbjct:   43 LAMKRHVPRSSRGQDSEPESIEVDHDGIPKIGRLKNVVRQTRGDIVGTRGSVKVQGKGW--DNILPKPPTIRVAGGTAKGRKLNRPEVYLRPMMGKVKEALFSILTEFDVLRDDAIALDTFAGCGSVGIEALSRGVGKAVFVDYSKEACNTIRGNLEVCEFEDRGMVVCSKAEAIYDDPVQVLAKMGGKGFDLLTMTPPYEEVDYGDLLGRITKSEHLMNDGCIVVVEYPIELGSLPPVVGNRLVGMRNRKYGRTMLAIYACNPGSNMEPRPQEF 315          
BLAST of Ggra6129.t1 vs. uniprot
Match: A0A7S3ADP2 (Hypothetical protein n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ADP2_9RHOD)

HSP 1 Score: 239 bits (609), Expect = 6.250e-74
Identity = 137/285 (48.07%), Postives = 176/285 (61.75%), Query Frame = 0
Query:   50 EEATSSVDDEPSSGKVYAPRQQRGGGRRFR-GFVRSQGKKLVSERLPPNPPGLRIASGSVKGRRIRSPNVYLRPMMAKVREAVFSMLDTL------------------------------DALPKNGICLDLFAGCGSVGIEALSRGMNRAIFVDYSRACVDSINDNLATCNFDDRSLAVCSRVEEFLRDGTKYNYGKHYDLITITPPYEEVDYSQLMKSVAESDCVGEQTFVVVEYPVELRTFPPSLGNRLVGIRNRRYGRTVIAIYACQPDVDIELRPDEFIS 303
            E   SS  ++   GKV APR  + G R+F+ G V+ QGKK V E +P   P LRI  GS KGR++ SP+VY+RPMM KVREAV+SM+  L                              DAL + G+ +D+F G GSVG+EALSRG+++A+FVD S  C ++   N+  C F+ R  A+    E+ L    +Y    H  LIT+TPPYEEVDY +LM + A SD VGE TF+VVEYPVEL +  P+  +RLVGIRNR+YGRTVIAIYACQP   ++ RPDEF S
Sbjct:   39 ESEASSEKEKYKLGKVSAPRASKYGKRKFQVGNVKQQGKKYV-EYVPA--PQLRITGGSAKGRKLTSPDVYMRPMMGKVREAVYSMVGLLSFRNENEVLGFQLVFLLTHALAGDKQLYQFDAL-EGGMAVDMFCGSGSVGLEALSRGLDQAVFVDLSPVCTETCEKNVVHCGFEGRGRAINCTAEQMLLHPERYGVEGHAKLITLTPPYEEVDYGELMYAAAGSDLVGEGTFLVVEYPVELGSLEPAYRHRLVGIRNRKYGRTVIAIYACQPPRFVDPRPDEFAS 319          
BLAST of Ggra6129.t1 vs. uniprot
Match: M2VUV8 (Putative N6-adenine-specific methylase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VUV8_GALSU)

HSP 1 Score: 216 bits (549), Expect = 8.280e-65
Identity = 104/220 (47.27%), Postives = 149/220 (67.73%), Query Frame = 0
Query:   82 VRSQGKKLVSERLPPNPPGLRIASGSVKGRRIRSPNVYLRPMMAKVREAVFSMLDTLDALPKNGICLDLFAGCGSVGIEALSRGMNRAIFVDYSRACVDSINDNLATCNFDDRSLAVCSRVEEFLRDGTKYNYGKHYDLITITPPYEEVDYSQLMKSVAESDCVGEQTFVVVEYPVELRTFPPSLGNRLVGIRNRRYGRTVIAIYACQPDVDIELRPDEF 301
            + SQGK++   R+   PP L + +GSVKGRR+ +P VY+RPMM+KVR A+F ML  +  L      LD+FAG G+VGIEALS+ + +A+FVD S  C  ++ +NL  C F DR  A CS  E+F+ +  ++     ++L+T+TPPYEE+DY+ LM ++A S  +G  + VVVEYP+EL   PP +  RLVG+RNRRYGRTV+ +Y   P+  ++ RP+EF
Sbjct:   81 IYSQGKRI---RMDLPPPRLYVNAGSVKGRRLLNPPVYIRPMMSKVRSALFCMLTDMKLLRPEYRILDIFAGTGAVGIEALSQNVGKAVFVDSSPDCCATVRENLERCRFSDRGDAFCSTYEDFVDNPGRFQVKGTFELVTLTPPYEEIDYNTLMSTIATSSLIGPGSVVVVEYPIELGVMPPVIMERLVGLRNRRYGRTVLGLYGVDPEPPLDARPEEF 297          
The following BLAST results are available for this feature:
BLAST of Ggra6129.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFH33.620e-9876.80Putative rRNA methyltransferase YlbH n=1 Tax=Graci... [more]
R7QRG51.580e-9260.09Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A6T6ADP04.140e-8152.80Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S1ESE52.200e-8052.76Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S1TKC55.020e-7953.63Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7S1H8132.140e-7651.21Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A5J4YUW62.960e-7549.43Putative rRNA methyltransferase YlbH n=1 Tax=Porph... [more]
L1JRE45.860e-7547.27Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S3ADP26.250e-7448.07Hypothetical protein n=4 Tax=Rhodosorus marinus Ta... [more]
M2VUV88.280e-6547.27Putative N6-adenine-specific methylase n=1 Tax=Gal... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF03602Cons_hypoth95coord: 101..286
e-value: 2.3E-40
score: 138.2
NoneNo IPR availableGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 95..295
e-value: 1.2E-45
score: 157.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..79
NoneNo IPR availablePANTHERPTHR43542:SF1METHYLTRANSFERASEcoord: 101..289
NoneNo IPR availablePANTHERPTHR43542METHYLTRANSFERASEcoord: 101..289
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 101..286

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:622064..622987 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6129.t1Ggra6129.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 622064..622987 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6129.t1 ID=Ggra6129.t1|Name=Ggra6129.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=308bp
MAFVNSFLGSDFKSRNNKVGSLQTCPSTPTKTLRMKISAKRRVPPEGLRE
EATSSVDDEPSSGKVYAPRQQRGGGRRFRGFVRSQGKKLVSERLPPNPPG
LRIASGSVKGRRIRSPNVYLRPMMAKVREAVFSMLDTLDALPKNGICLDL
FAGCGSVGIEALSRGMNRAIFVDYSRACVDSINDNLATCNFDDRSLAVCS
RVEEFLRDGTKYNYGKHYDLITITPPYEEVDYSQLMKSVAESDCVGEQTF
VVVEYPVELRTFPPSLGNRLVGIRNRRYGRTVIAIYACQPDVDIELRPDE
FISVGRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases