Ggra6024.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra6024.t1
Unique NameGgra6024.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length487
Homology
BLAST of Ggra6024.t1 vs. uniprot
Match: A0A2V3IHJ5 (Squalene synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHJ5_9FLOR)

HSP 1 Score: 776 bits (2003), Expect = 4.070e-280
Identity = 387/486 (79.63%), Postives = 428/486 (88.07%), Query Frame = 0
Query:    1 MGVLKEAMAAGSLTELIALFRYKRKAAAASALMTAALDEDWSFAYTALSAVSRSFALVIMELDSELRHAICVFYLVLRALDTIEDDTSVNPAVRHQLCTNFWNNLESFVTDESYQPWSSSEFGSGFEKTLCEKFPCVLRCYKSLHTKYQVTIRDITRRMGYGMAEHIEDVSCETVKDYDLYCHYVAGLVGYGLSDIFAQSGYENASFSERTDLSNSMGLFLQKTNIIRDYLEDINEGRTFWPKEIWSNYGNELSDFRDRANRKFALAALNHMVTDALSHVPDCLEYMSRVRTDTVFKFVAIPQVMAIATLAELYNNGKIFEGVVKIRRSKTADLVLRTNNMDVVYKVFFECAQAIIQKIEPHDPNADRTRQRLNCVLDICVPHVPATPDLIIPNVLSIILFCGLSSYVLKRRQEHFDGAVFTWRSAGGIMEPRDMLAIASLFLVCIYMFGFFLLPYMQKLQREEVRRMQESNRHARLRERVVILED 486
            MGVLK+AMAAGSL+ELIAL RYKRKAAAA+ALMTAALD +W +AYTAL AVSRSFALVIMEL +E+RH +C+FYLVLRALDTIEDDTS +P +R QLC+NFW  L+        QPWSSS+FG+G EK LC+ FP VLRCY SLH KYQ  IRDITRRMG GMAEHI DV+C++++DYDLYCHYVAGLVGYGLSDIFAQS  E+ SF+ER DLSNSMGLFLQKTNI+RDYLEDINEGRTFWP+EIWSNYGN LSDF+D ANRKFAL  LNHMVTDAL HVP CLEYMSRVRT+ +FKFVAIPQVMAIATLAE YNNGK+FEGVVKIRRSKTA LVLRT NMD VYKVFF+ A+ I+  +E HDPNA++TRQ LN V+DICVPHVP+TPDLIIPNVLSIILFC LSSYVLKRRQEHFDGAVFTWRSAGGIMEPRDMLA+A+LFLVCIYMFGFFLLPYMQKLQREEVRRMQ S R AR +E +V LED
Sbjct:    1 MGVLKDAMAAGSLSELIALVRYKRKAAAANALMTAALDHNWKYAYTALCAVSRSFALVIMELSTEMRHPVCIFYLVLRALDTIEDDTSADPDLRQQLCSNFWKQLDVNPALPDAQPWSSSQFGTGAEKHLCQNFPSVLRCYHSLHVKYQRIIRDITRRMGNGMAEHIRDVACDSIRDYDLYCHYVAGLVGYGLSDIFAQSALEDKSFAERKDLSNSMGLFLQKTNIVRDYLEDINEGRTFWPQEIWSNYGNSLSDFKDPANRKFALPLLNHMVTDALRHVPHCLEYMSRVRTNDIFKFVAIPQVMAIATLAECYNNGKVFEGVVKIRRSKTAQLVLRTKNMDYVYKVFFDYARTIMTAVESHDPNAEKTRQLLNEVMDICVPHVPSTPDLIIPNVLSIILFCVLSSYVLKRRQEHFDGAVFTWRSAGGIMEPRDMLAVAALFLVCIYMFGFFLLPYMQKLQREEVRRMQTSARLARRQENIVSLED 486          
BLAST of Ggra6024.t1 vs. uniprot
Match: R7Q3V5 (Squalene synthase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3V5_CHOCR)

HSP 1 Score: 679 bits (1753), Expect = 4.310e-242
Identity = 342/488 (70.08%), Postives = 401/488 (82.17%), Query Frame = 0
Query:    1 MGVLKEAMAAG-SLTELIALFRYKRKAAAASALMTAALDEDWSFAYTALSAVSRSFALVIMELDSELRHAICVFYLVLRALDTIEDDTSVNPAVRHQLCTNFWNNLESFVTDESYQPWSSSEFGSGFEKTLCEKFPCVLRCYKSLHTKYQVTIRDITRRMGYGMAEHIEDVSCETVKDYDLYCHYVAGLVGYGLSDIFAQSGYENASFSERTDLSNSMGLFLQKTNIIRDYLEDINEGRTFWPKEIWSNYGNELSDFRDRANRKFALAALNHMVTDALSHVPDCLEYMSRVRTDTVFKFVAIPQVMAIATLAELYNNGKIFEGVVKIRRSKTADLVLRTNNMDVVYKVFFECAQAIIQKIEPHDPNADRTRQRLNCVLDICVPHVPATPDLIIPNVLSIILFCGLSSYVLKRRQEHFDGAVFTWRSAGGIMEPRDMLAIASLFLVCIYMFGFFLLPYMQKLQREEVRRMQESNRHARLR-ERVVILED 486
            MGVLKE +AA  +  E++AL RYKRKA  A   MT +LD DW +AY+ LS VSRSF+LVIMEL   LRH ICVFYLVLRALDT+EDDTS++P +R  +CTNF N LE    +E    WSS+ FG G EK L   FP VLRCY ++   ++  I+DIT+RMG GMAEHIED SC++  DYD YCHYVAGLVG GLSDIFA SG E  +FS+RT+LSNSMGLFLQKTNIIRDYLEDINEGRTFWP+EIW  YGN L+DF+D ANRKF+LA LNHM+TDAL H+PDC+EYMS V+T  VF FVA+PQVMAIATLAELYNNGK+FEGVVKIRRSKTA LVL T NMD +YKVFF+ A  +++ +EPHDPNA++TRQ LN V+D+C+PHVPA+PDL+IPNV+SIILFCGLSSYVLKRRQ+HFDGAVFTWRSAGGIME  DM+AIA+LFLVCIYMFGFFLLPYM KLQ++EVRRM   +R +  R +RVV+LED
Sbjct:    1 MGVLKEVIAARYNPAEVLALLRYKRKAVKAREQMTLSLDPDWVYAYSNLSKVSRSFSLVIMELRPVLRHPICVFYLVLRALDTVEDDTSIHPDIRRDICTNFHNFLEP---EEGENAWSSNSFGDGAEKDLLIHFPIVLRCYNTIDPSFRTVIKDITKRMGAGMAEHIEDTSCDSTADYDQYCHYVAGLVGLGLSDIFAISGCEEPAFSDRTELSNSMGLFLQKTNIIRDYLEDINEGRTFWPREIWVQYGNCLTDFKDPANRKFSLAVLNHMITDALRHMPDCIEYMSHVQTQDVFNFVAVPQVMAIATLAELYNNGKVFEGVVKIRRSKTAQLVLSTKNMDALYKVFFDYAVTMLKNVEPHDPNAEKTRQILNKVIDVCLPHVPASPDLVIPNVISIILFCGLSSYVLKRRQDHFDGAVFTWRSAGGIMEFSDMVAIAALFLVCIYMFGFFLLPYMSKLQQDEVRRMYTESRTSNPRPQRVVMLED 485          
BLAST of Ggra6024.t1 vs. uniprot
Match: A0A1X6P6R7 (Squalene synthase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P6R7_PORUM)

HSP 1 Score: 467 bits (1202), Expect = 6.490e-158
Identity = 246/452 (54.42%), Postives = 312/452 (69.03%), Query Frame = 0
Query:    7 AMAAGSLTELIALFRYKRKAAAASALMTAALDEDWSFAYTALSAVSRSFALVIMELDSELRHAICVFYLVLRALDTIEDDTSVNPAVRHQLCTNFWNNLESFVTDESYQPWSSSEFGSGFEKTLCEKFPCVLRCYKSLHTKYQVTIRDITRRMGYGMAEHIEDVSCETVKDYDLYCHYVAGLVGYGLSDIFAQSGYENASFSE--RTDLSNSMGLFLQKTNIIRDYLEDINEGRTFWPKEIWSNYGNELSDFRDRANRKFALAALNHMVTDALSHVPDCLEYMSRVRTDTVFKFVAIPQVMAIATLAELYNNGKIFEGVVKIRRSKTADLVLRTNNMDVVYKVFFECAQAIIQKIEPHDPNADRTRQRLNCVLDICVPHVPATPDLIIPNVLSIILFCGLSSYVLKRRQEHFDGAVFTWRSAGGIMEPRDMLAIASLFLVCIYMFGFFLLPY 456
            A AA   TEL+AL R++ +  AA A     +D+ W + Y  L  VSRSFALVIMEL++ELR  + +FYLVLRALDT+EDDT+V   VR  LC +F N L           W++  FG G EK L E+F  V  C+  L  +YQ  I DITR MG+GMAEH++D +C T+ DYD YCHYVAGLVG GL+ +FA SG E+ + ++  R  L+NSMGLFLQKTNIIRDYLED+ +GRTFWP+EIWS Y + L  F     RK AL+ LN MVTDAL HVPDCLEYMS +R+ TVF FVAIPQVMA+ATLAE+Y N  +F GVVK+RR KTA L+ R  +++ V+ +FF  A  +   + P DP+ + TR  L  ++   +PHVPATPDL +PN LS+I F  LS+Y+L+RR EH DG  F+WR  GGI EP DMLA A+LFLV +++F FF L +
Sbjct:   13 ATAARRPTELLALLRFRARGKAAIAAALGGMDDRWRWCYGILGQVSRSFALVIMELEAELRDPVAIFYLVLRALDTVEDDTAVEAVVRRALCIDFHNKLAPEAGG-----WTTDGFGKGAEKELLERFDTVHSCFSDLKPEYQRVIADITREMGFGMAEHMDDTACVTIADYDRYCHYVAGLVGLGLTRMFAVSGLESPALADPRRDHLANSMGLFLQKTNIIRDYLEDLTDGRTFWPEEIWSVYADRLGAFAAPEQRKAALSCLNAMVTDALRHVPDCLEYMSAIRSPTVFHFVAIPQVMAMATLAEVYANPGVFAGVVKLRRGKTAVLIARATSVESVHALFFGSAVGMRAALAPADPSVEETRSALERIIRRSLPHVPATPDLTVPNRLSLIAFVTLSTYLLRRRAEHNDGTSFSWRR-GGIPEPLDMLAAAALFLVMMWLFSFFGLQF 458          
BLAST of Ggra6024.t1 vs. uniprot
Match: A0A7S1THX1 (Squalene synthase n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1THX1_9RHOD)

HSP 1 Score: 437 bits (1123), Expect = 9.770e-147
Identity = 231/453 (50.99%), Postives = 300/453 (66.23%), Query Frame = 0
Query:   15 ELIALFRYKRKAAAASALM-----TAALDEDWSFAYTALSAVSRSFALVIMELDSELRHAICVFYLVLRALDTIEDDTSVNPAVRHQLCTNFWNNLESFVTDESYQPWSSSEFGSGFEKTLCEKFPCVLRCYKSLHTKYQVTIRDITRRMGYGMAEHIEDVSCETVKDYDLYCHYVAGLVGYGLSDIFAQSGYENASFSERTDLSNSMGLFLQKTNIIRDYLEDINEGRTFWPKEIWSNYGNELSDFRDRANRKFALAALNHMVTDALSHVPDCLEYMSRVRTDTVFKFVAIPQVMAIATLAELYNNGKIFEGVVKIRRSKTADLVLRTNNMDVVYKVFFECAQAIIQKIEPHDPNADRTRQRLNCVLDICVPHVPATPDLIIPNVLSIILFCGLSSYVLKRRQEHFDGAVFTWRSAGGIMEPRDMLAIASLFLVCIYMFGFFLLPYMQKLQR 462
            EL+A+ +YK KA  A                  F Y  L  VSRSFALVIMEL  +LR  +C+FYLVLR LDT+EDDT+V+P VR  L   F+  ++        + W+   FG+     L + F  V+ C+++L  KYQ  IRDITR MG GMA+H+ D +C T+ DYDLYCHYVAGLVG GL+ +F +SG E+     R DLSNSMGLFLQKTNIIRDYLED+NE RTFWP EIWS +GNEL DF++   R  A+A LN MVTDAL HVPDC+EYM R+R + VF FVAIPQVMAI TLAE +NN  +FEGVVK+RR  TA LVLRT  M  +++++F+ A  +++K+EP DP+A  TR  LN V+++ +PHVP TPDL +PN  ++++F  LS Y+L RR    DG     R  G +    D+ A+++LFL   Y+  FF L Y++  +R
Sbjct:   13 ELVAMVQYKLKARQAEKETKRPGRAPVRPGSREFCYGILKDVSRSFALVIMELAEDLRDPVCIFYLVLRGLDTVEDDTAVDPDVRVPLLREFYKKIDQ-------EGWTLDGFGTNHYLRLLQGFDRVIDCFRALEPKYQAVIRDITRMMGAGMADHVRDEACVTIADYDLYCHYVAGLVGVGLTRMFVESGNEDPYLLNREDLSNSMGLFLQKTNIIRDYLEDMNEARTFWPSEIWSRFGNELGDFQNPEKRDDAVACLNAMVTDALRHVPDCIEYMVRIRNEHVFNFVAIPQVMAIGTLAECFNNPMVFEGVVKLRRGLTAKLVLRTKAMPALFRLYFDFANVMLKKLEPSDPSASATRTSLNQVVELSLPHVPGTPDLTVPNGAAVVVFAVLSFYLLGRRGAG-DGIEVGSRRTGQLPSLGDIAAMSALFLAISYLLTFFGLQYVKPTRR 457          
BLAST of Ggra6024.t1 vs. uniprot
Match: A0A5J4YXY5 (Squalene synthase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YXY5_PORPP)

HSP 1 Score: 416 bits (1070), Expect = 2.110e-138
Identity = 237/473 (50.11%), Postives = 314/473 (66.38%), Query Frame = 0
Query:    3 VLKEAMAAG-SLTELIALFRYKRKAAAA---------SALMTAALDEDWSFAYTALSAVSRSFALVIMELDSELRHAICVFYLVLRALDTIEDDTSVNPAVRHQLCTNFWNNL----ESFVTDESYQPWSSSEFGSGFEKTLCEKFPCVLRCYKSLHTKYQVTIRDITRRMGYGMAEHIEDVSCETVKDYDLYCHYVAGLVGYGLSDIFAQSGYENASFSERTDLSNSMGLFLQKTNIIRDYLEDINEGRTFWPKEIWSNYG--NELSDFRDRANRKFALAALNHMVTDALSHVPDCLEYMSRVRTDTVFKFVAIPQVMAIATLAELYNNGKIFEGVVKIRRSKTADLVLRTNNMDVVYKVFFECAQAIIQKIEPHDPNADRTRQRLNCVLDICVPHVPATPDLIIPNVLSIILFCGLSSYVLKRRQE-HFDGAVFTWRSAGGIMEPRDMLAIASLFLVCIYMFGFFLLPYMQ 458
            ++K+ MA+G  + E++A+ R+K KA+ A         +    AA    W F Y  L  VSRSFALVIMELD ELR  +C+FYLVLRALDTIEDDTS +   R  LC  F+  L    E  V + +++   SSEFG   EK L EKFP V+ C++SL  KYQ  IRDIT++MG GMAEHI D  C TV++YD YC YVAGLVG GLS++F  SG E+  F++   LS SMGLFLQKTNIIRDYLEDI++ RTFWPKEIWS +     L+DF+D  NR  A+  LN MV DAL HVPDC+EYMS+V+ + VF FVAIPQVMAI T++E  NN  +FEGVVK+R+  TA L+++T +M  +  ++F+ A  + +K+E  DP+ +    RL+ V D+ V ++  TP+L++PN +  IL   LS Y+++RR+E   +G        GG+   +DMLA+A LFL   YM GFF L +M+
Sbjct:    4 MMKDVMASGWRVDEVLAMLRFKVKASRAGTAAQARRHAGAADAAAAAHWDFCYEYLKLVSRSFALVIMELDDELRDPVCIFYLVLRALDTIEDDTSHDAERRIALCKQFYTFLDVASEQNVAEVAFR---SSEFGKLHEKVLLEKFPVVIECFRSLAPKYQSVIRDITQKMGAGMAEHIHDKECITVEEYDTYCFYVAGLVGLGLSEMFVVSGRESDFFTKNEHLSISMGLFLQKTNIIRDYLEDIHDARTFWPKEIWSAHAPNQSLADFKDPDNRVHAVECLNAMVADALRHVPDCIEYMSQVQNEHVFNFVAIPQVMAIGTISECLNNSLVFEGVVKLRKGLTAKLIMQTKSMPALSSLYFDFACVMQKKLESSDPSYELVCDRLSQVKDLSVAYMRTTPNLMVPNWVVAILSVLLSYYLVQRRRELDLEGLPH-----GGLPSGQDMLAMAGLFLGVAYMLGFFGLQFMK 468          
BLAST of Ggra6024.t1 vs. uniprot
Match: A0A7S0ZHI8 (Squalene synthase n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZHI8_9RHOD)

HSP 1 Score: 409 bits (1050), Expect = 1.180e-135
Identity = 233/467 (49.89%), Postives = 301/467 (64.45%), Query Frame = 0
Query:    1 MGVLKEAM-AAGSLTELIALFRYKRKAAAASALMTAA------LDEDWSFAYTALSAVSRSFALVIMELDSELRHAICVFYLVLRALDTIEDDTSVNPAVRHQLCTNFWNNLESFVTDESYQPWSSSEFGSGFEKTLCEKFPCVLRCYKSLHTKYQVTIRDITRRMGYGMAEHIEDVSCETVKDYDLYCHYVAGLVGYGLSDIFAQSGYENASFSERTDLSNSMGLFLQKTNIIRDYLEDINEGRTFWPKEIWSNYG--NELSDFRDRANRKFALAALNHMVTDALSHVPDCLEYMSRVRTDTVFKFVAIPQVMAIATLAELYNNGKIFEGVVKIRRSKTADLVLRTNNMDVVYKVFFECAQAIIQKIEPHDPNADRTRQRLNCVLDICVPHVPATPDLIIPNVLSIILFCGLSSYVLKRRQEHFDGAVFTWRSAGGIMEPRDMLAIASLFLVCIYMFGFFLLPYMQ 458
            MG++KE + AA    E +A+ R+K KA AA A   A       +   W F Y  L  VSRSFA+VIMELD ELR  +C+FYLVLRALDT+EDDT+ +   R  LCT F+  LE          WS+SE+G   EK L E+F  VL C+ SL  KY+  I DITRRMG GMAEHI D  C +V DYD YC YVAGLVG GLS +F  SG E+  F E   LS SMGLFLQK NIIRDYLEDI++ RTFWP+EIWS +    ELS F+    R  A+  LN M+TDAL HVPDC++YMSR++   VF FVAIPQVMAI TLAE +NN  +FEG+VK+RR  TA LV++T  M  ++K++F+ A  + +K +  D + + T  RLN + D+ +P++ ++ DL   N L  +L   LS Y++ RR++ FD  V+    AG + E +DM A+ +LFL   YM  FF L +M+
Sbjct:    1 MGIVKELVGAAHRPDEALAMVRFKLKARAAYAASVALRSASDPMTAKWEFCYEYLGKVSRSFAMVIMELDDELRDPVCIFYLVLRALDTVEDDTAKDSQARIDLCTQFYKKLE-------LPEWSTSEYGYAHEKELLEQFSAVLACFGSLPEKYRKVISDITRRMGKGMAEHIHDKECISVADYDQYCFYVAGLVGIGLSSMFVASGREDRFFVENDHLSISMGLFLQKVNIIRDYLEDIHDARTFWPREIWSEFSPTGELSAFKHPEYRMEAVECLNAMITDALRHVPDCIQYMSRIQNSFVFNFVAIPQVMAIGTLAECFNNPLVFEGIVKLRRGLTAKLVMKTKTMSALFKLYFDFAMNMKKKCQVADASYELTAMRLNSICDLSLPYIVSSHDLQASNWLFALLLVFLSVYLVNRRRD-FD--VYGIAQAG-LPEIQDMAALGALFLCLAYMLVFFGLQFMR 456          
BLAST of Ggra6024.t1 vs. uniprot
Match: M1UQ86 (Squalene synthase n=2 Tax=cellular organisms TaxID=131567 RepID=M1UQ86_CYAM1)

HSP 1 Score: 386 bits (991), Expect = 1.880e-126
Identity = 234/485 (48.25%), Postives = 298/485 (61.44%), Query Frame = 0
Query:   15 ELIALFRYKRKAAAASALMTAALDE---------DWSFAYTALSAVSRSFALVIMELDSELRHAICVFYLVLRALDTIEDDTSVNPAVRHQLCTNFWNNLESFVTDESYQPWSSSEFGSGFEKTLCEKFPCVLRCYKSLHTKYQVTIRDITRRMGYGMAEHIEDVSCETVKDYDLYCHYVAGLVGYGLSDIFAQSGYENASF---SERTD-LSNSMGLFLQKTNIIRDYLEDINEGRTFWPKEIWSNYGN--ELSDFRDRANRKFALAALNHMVTDALSHVPDCLEYMSRVRTDTVFKFVAIPQVMAIATLAELYNNGKIFEGVVKIRRSKTADLVLRTNNMDVVYKVFFECAQAIIQKIEPHDPNADRTRQRLNCVLDIC--------------VPHVPA-TPDLIIP--NVLSIILFCGLSSYVLKRRQEHFDGAVFTWRSA-GGIMEPRDMLAIASLFLVCIYMFGFFLLPYMQKLQREEVR 466
            EL AL +Y+ K+  A  +    L +         DW F Y  L  VSRSFALVIMELDSELR  +C+FYL+LRALDTIEDDTSV+  +R +LC   + +L+          ++  + GS  E+ L E+FP VL C+  L   Y+  I DITR MG GMA+HI   +C T+ DYDLYCHYVAGLVG GLS +FA SGYE+      S+  D L+NSMGLFLQKTNIIRDYLED  +GRTFWP+EIW  +G   EL+D     +R+ A+  LN MVTDAL HVPDCL+YMS+VR+++VF FVAIPQVMAIATLA  YNN  +F   VK+RR +TA LVLR  +M  V  +F E  +AI   ++P DP+   T   +   L +               V  VPA  P L +   N ++++LF  LS YVL RR++  DG    WR+A GGI    D+ AIA LF V  Y+ G F L Y+      E++
Sbjct:   13 ELWALVKYREKSRKAVNVQEEGLRQRVGDAERIADWRFCYEYLRRVSRSFALVIMELDSELRDPVCIFYLILRALDTIEDDTSVDATLRMRLCQELYTHLQG-------NSYAVHDIGSADERKLLEEFPRVLGCFHELKPAYREIITDITRCMGDGMAQHIHHKACATIADYDLYCHYVAGLVGIGLSAMFAASGYESREVFVESKLADALANSMGLFLQKTNIIRDYLEDQRDGRTFWPQEIWGRFGKDMELADLARPEHRRVAVECLNAMVTDALRHVPDCLQYMSQVRSESVFYFVAIPQVMAIATLALCYNNADVFVRRVKLRRGQTAKLVLRARDMPAVLTIFTEYCEAIASSVDPCDPSYAETVAAVEHALTVAARIRDELIYRPMATVYRVPAYRPPLGLKYANRIAVLLFIILSLYVLYRRKQQ-DGGGLGWRAAFGGIPSLGDLAAIALLFAVLSYLLGVFGLQYVSLAPPNEIK 489          
BLAST of Ggra6024.t1 vs. uniprot
Match: A0A7J7ICJ5 (Squalene synthase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ICJ5_9RHOD)

HSP 1 Score: 383 bits (984), Expect = 2.070e-125
Identity = 233/474 (49.16%), Postives = 286/474 (60.34%), Query Frame = 0
Query:   15 ELIALFRYKRKAAAASALMTAALDE---------DWSFAYTALSAVSRSFALVIMELDSELRHAICVFYLVLRALDTIEDDTSVNPAVRHQLCTNFWNNLESFVTDESYQPWSSSEFGSGFEKTLCEKFPCVLRCYKSLHTKYQVTIRDITRRMGYGMAEHIEDVSCETVKDYDLYCHYVAGLVGYGLSDIFAQSGYENASF---SERTD-LSNSMGLFLQKTNIIRDYLEDINEGRTFWPKEIWSNYGN--ELSDFRDRANRKFALAALNHMVTDALSHVPDCLEYMSRVRTDTVFKFVAIPQVMAIATLAELYNNGKIFEGVVKIRRSKTADLVLRTNNMDVVYKVFFECAQAIIQKIEPHDPNADRTRQRLNCVLDICV----------------PHVPATPDLIIPNVLSIILFCGLSSYVLKRRQEHFDGAVFTWRSA-GGIMEPRDMLAIASLFLVCIYMFGFFLLPY 456
            E++AL +YK K+  A+     AL           DW F Y  L  VSRSFALVIMELDS LR  +CVFYLVLRALDTIEDDT+++  +R +LC   + +L           +     G   E+ L E+ P V  C++ L   YQ  I DITRRMG GMA+HI   +CETV DYDLYCHYVAGLVG GLS +FA SG+E+      S+  D L+NSMGLFLQKTNIIRD+LED  EGRTFWP+EIWS +G   EL       NR+ A+  LN M+TDAL HVPDCL YMS+VR+ +VF FVAIPQVMAIATLA  YNN ++FE  VK+RR +TA LVLRT +M  V  +F E  + I    +P DP+   T   +   L +                  P   A  DL   N +++ILF  LS YVL RR++  DG    WR+A GGI    D+ AIA LF V  Y+ G F L Y
Sbjct:   13 EVVALVQYKHKSRKAAYEQERALRRRVCDTKRVCDWRFCYDYLQRVSRSFALVIMELDSHLRDPVCVFYLVLRALDTIEDDTNLDATLRMRLCREMYTHLGETA-------YVLHGIGEADERALLEQLPRVFGCFRELDPAYQEIISDITRRMGDGMAQHIHQCACETVADYDLYCHYVAGLVGIGLSAMFAASGHESREVFVESKLADTLANSMGLFLQKTNIIRDFLEDHTEGRTFWPREIWSQFGKGMELGALALPENRRAAVECLNAMITDALRHVPDCLLYMSQVRSKSVFYFVAIPQVMAIATLALCYNNPEVFERRVKLRRGQTAKLVLRTRDMSAVLSIFRERCEEIASSADPCDPSYAETVAAVEHALSVTTQIGNDLVFCPVGSQRAPAYRAPLDLKYANRIAVILFIVLSLYVLYRRKQQ-DGGGLGWRAAFGGIPSLGDLAAIALLFAVLSYLLGVFGLQY 478          
BLAST of Ggra6024.t1 vs. uniprot
Match: A0A833R042 (Squalene synthase n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833R042_9POAL)

HSP 1 Score: 325 bits (832), Expect = 6.170e-104
Identity = 184/361 (50.97%), Postives = 231/361 (63.99%), Query Frame = 0
Query:   23 KRKAAAASALMTAALDEDWSFAYTALSAVSRSFALVIMELDSELRHAICVFYLVLRALDTIEDDTSVNPAVRHQLCTNFWNNLESFVTDESYQPWSSSEFGSGFEKTLCEKFPCVLRCYKSLHTKYQVTIRDITRRMGYGMAEHIEDVSCETVKDYDLYCHYVAGLVGYGLSDIFAQSGYENASFSERTDLSNSMGLFLQKTNIIRDYLEDINE---GRTFWPKEIWSNYGNELSDFRDRANRKFALAALNHMVTDALSHVPDCLEYMSRVRTDTVFKFVAIPQVMAIATLAELYNNGKIFEGVVKIRRSKTADLVLRTNNMDVVYKVFFECAQAIIQKIEPHDPNADRTRQRLNCVLDIC 380
            K K AAA        +E W+FAYT L  VSRSFALVI +L  ELR+A+CVFYL+LRALDT+EDDTSV   V+  +  +F+ +L           WS S  G+   K L +KF  V   +  L+  YQ  I +I RRMG GMA  I+    ETV DYD YCHYVAGLVG GLS +F  +G E+ +      LSNSMGLFLQKTNIIRDYLEDINE    R FWP+EIWS Y N+L DF+   N + ++  LN MVT+AL HV DCL+YM+ ++    F+F AIPQVMAI TLA  YNN  +F+GVVK+RR  TA ++  TN M  VY  F+E + ++  KIE  DPN+  TR+R+  +   C
Sbjct:   19 KLKMAAARISKQIPAEEHWAFAYTMLQKVSRSFALVIQQLGPELRNAVCVFYLILRALDTVEDDTSVATEVKVPILESFYRHLYDLN-------WSFS-CGTKDYKILMDKFQLVQTSFLELNKDYQEAIEEIARRMGAGMAIFIQK-EVETVDDYDEYCHYVAGLVGLGLSKLFYVAGLEDLASDS---LSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYANKLEDFKYEENFEKSVQCLNDMVTNALIHVKDCLQYMALLKDQATFRFCAIPQVMAIGTLALCYNNVNVFKGVVKMRRGLTARVIAETNTMKDVYDAFYELSASLESKIEDKDPNSSLTRKRVEEIKKAC 367          
BLAST of Ggra6024.t1 vs. uniprot
Match: O22106 (Squalene synthase n=18 Tax=PACMAD clade TaxID=147370 RepID=O22106_MAIZE)

HSP 1 Score: 323 bits (827), Expect = 4.350e-103
Identity = 175/346 (50.58%), Postives = 227/346 (65.61%), Query Frame = 0
Query:   38 DEDWSFAYTALSAVSRSFALVIMELDSELRHAICVFYLVLRALDTIEDDTSVNPAVRHQLCTNFWNNLESFVTDESYQPWSSSEFGSGFEKTLCEKFPCVLRCYKSLHTKYQVTIRDITRRMGYGMAEHIEDVSCETVKDYDLYCHYVAGLVGYGLSDIFAQSGYENASFSERTDLSNSMGLFLQKTNIIRDYLEDINE---GRTFWPKEIWSNYGNELSDFRDRANRKFALAALNHMVTDALSHVPDCLEYMSRVRTDTVFKFVAIPQVMAIATLAELYNNGKIFEGVVKIRRSKTADLVLRTNNMDVVYKVFFECAQAIIQKIEPHDPNADRTRQRLNCVLDIC 380
            +E W+FAY+ L  VSRSFALVI +L  ELR+A+C+FYLVLRALDT+EDDTS+   V+  +   F+ ++ +       + W  S  G+   K L +KF  V   +  L   YQ  I ++TRRMG GMA+ I     ETV DYD YCHYVAGLVGYGLS +F  +G E+ +      LSNSMGLFLQKTNIIRDYLEDINE    R FWP+EIWS Y ++L DF+   N K A+  LN+MVTDAL H  +CL+YMS ++   +F+F AIPQ+MAI T A  YNN  +F GVVK+RR  TA ++  TN+M  VY  F+E +  I  KI+  DPNA  T++R++ +   C
Sbjct:   30 EEHWAFAYSMLQKVSRSFALVIQQLGPELRNAVCIFYLVLRALDTVEDDTSIPTEVKVPILQEFYRHIYN-------RDWHYS-CGTNHYKMLMDKFRHVSTAFLELGEGYQKAIEEVTRRMGAGMAKFICK-EVETVDDYDEYCHYVAGLVGYGLSRLFYAAGTEDLALDS---LSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYADKLEDFKYEENSKKAVQCLNNMVTDALIHAEECLQYMSALKDPAIFRFCAIPQIMAIGTCALCYNNVHVFRGVVKMRRGLTARIIDETNSMTDVYTAFYEFSSLIESKIDDSDPNAALTQRRVDSIKQTC 363          
The following BLAST results are available for this feature:
BLAST of Ggra6024.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHJ54.070e-28079.63Squalene synthase n=1 Tax=Gracilariopsis chorda Ta... [more]
R7Q3V54.310e-24270.08Squalene synthase n=1 Tax=Chondrus crispus TaxID=2... [more]
A0A1X6P6R76.490e-15854.42Squalene synthase n=1 Tax=Porphyra umbilicalis Tax... [more]
A0A7S1THX19.770e-14750.99Squalene synthase n=1 Tax=Compsopogon caeruleus Ta... [more]
A0A5J4YXY52.110e-13850.11Squalene synthase n=1 Tax=Porphyridium purpureum T... [more]
A0A7S0ZHI81.180e-13549.89Squalene synthase n=1 Tax=Timspurckia oligopyrenoi... [more]
M1UQ861.880e-12648.25Squalene synthase n=2 Tax=cellular organisms TaxID... [more]
A0A7J7ICJ52.070e-12549.16Squalene synthase n=1 Tax=Cyanidiococcus yangmings... [more]
A0A833R0426.170e-10450.97Squalene synthase n=1 Tax=Carex littledalei TaxID=... [more]
O221064.350e-10350.58Squalene synthase n=18 Tax=PACMAD clade TaxID=1473... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 460..486
NoneNo IPR availableSFLDSFLDS00005Isoprenoid_Synthase_Type_Icoord: 36..338
e-value: 0.0
score: 227.1
NoneNo IPR availablePANTHERPTHR11626:SF2SQUALENE SYNTHASEcoord: 12..411
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 410..434
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 435..457
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 458..486
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..389
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 390..409
NoneNo IPR availableTMHMMTMhelixcoord: 435..457
IPR008949Isoprenoid synthase domain superfamilyGENE3D1.10.600.10Farnesyl Diphosphate Synthasecoord: 38..381
e-value: 4.2E-109
score: 366.8
IPR008949Isoprenoid synthase domain superfamilySUPERFAMILY48576Terpenoid synthasescoord: 40..376
IPR002060Squalene/phytoene synthasePFAMPF00494SQS_PSYcoord: 49..328
e-value: 2.8E-44
score: 151.6
IPR002060Squalene/phytoene synthaseSFLDSFLDG01018Squalene/Phytoene_Synthase_Licoord: 36..338
e-value: 0.0
score: 227.1
IPR006449Squalene synthase-likeTIGRFAMTIGR01559TIGR01559coord: 40..376
e-value: 4.0E-126
score: 418.7
IPR044844Trans-isoprenyl diphosphate synthases, eukaryotic-typePANTHERPTHR11626FARNESYL-DIPHOSPHATE FARNESYLTRANSFERASEcoord: 12..411
IPR019845Squalene/phytoene synthase, conserved sitePROSITEPS01045SQUALEN_PHYTOEN_SYN_2coord: 217..242
IPR019845Squalene/phytoene synthase, conserved sitePROSITEPS01044SQUALEN_PHYTOEN_SYN_1coord: 181..196
IPR033904Trans-isoprenyl diphosphate synthases, head-to-headCDDcd00683Trans_IPPS_HHcoord: 42..332
e-value: 2.16211E-69
score: 220.569

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000045_piloncontigtig00000045_pilon:160202..161662 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra6024.t1Ggra6024.t1Gracilaria gracilis GNS1m malemRNAtig00000045_pilon 160202..161662 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra6024.t1 ID=Ggra6024.t1|Name=Ggra6024.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=487bp
MGVLKEAMAAGSLTELIALFRYKRKAAAASALMTAALDEDWSFAYTALSA
VSRSFALVIMELDSELRHAICVFYLVLRALDTIEDDTSVNPAVRHQLCTN
FWNNLESFVTDESYQPWSSSEFGSGFEKTLCEKFPCVLRCYKSLHTKYQV
TIRDITRRMGYGMAEHIEDVSCETVKDYDLYCHYVAGLVGYGLSDIFAQS
GYENASFSERTDLSNSMGLFLQKTNIIRDYLEDINEGRTFWPKEIWSNYG
NELSDFRDRANRKFALAALNHMVTDALSHVPDCLEYMSRVRTDTVFKFVA
IPQVMAIATLAELYNNGKIFEGVVKIRRSKTADLVLRTNNMDVVYKVFFE
CAQAIIQKIEPHDPNADRTRQRLNCVLDICVPHVPATPDLIIPNVLSIIL
FCGLSSYVLKRRQEHFDGAVFTWRSAGGIMEPRDMLAIASLFLVCIYMFG
FFLLPYMQKLQREEVRRMQESNRHARLRERVVILED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008949Isoprenoid_synthase_dom_sf
IPR002060Squ/phyt_synthse
IPR006449Squal_synth-like
IPR044844Trans_IPPS_euk-type
IPR019845Squalene/phytoene_synthase_CS
IPR033904Trans_IPPS_HH