Ggra600.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra600.t1
Unique NameGgra600.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length352
Homology
BLAST of Ggra600.t1 vs. uniprot
Match: A0A833SXF7 (HAT family C-terminal dimerization region n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SXF7_PHYIN)

HSP 1 Score: 160 bits (404), Expect = 3.500e-41
Identity = 94/261 (36.02%), Postives = 137/261 (52.49%), Query Frame = 0
Query:    4 RLLQVKSVITFIPYVLLHERHSLGVDSDYQLPGELVQINSDSQYWNGVQKARALFAQICSCIGVLEGDSAPMSLAYACFLYIRVLLWTQKGFQEDTVAFENRSLYQWSRISSPVHALAFFCDSLFKSMRHSLTETYGDGFIGLGNGPLATQCHEALAMMAEEGF-YLEILTEEFMRHC------------------------------VSPKTLKRIYKGPASTSGIERSHKVEKRIHTSRRARTGEKKIKKQVAVAHNAA 233
            RL +VK  +T +   +++E+    +D  YQLP E      D Q+W  V     +F  IC CIGV+E +SA MS AYACF+Y  V +  ++ F  D +    + +++W+RI SPVHALAF+CD  +   R ++ + YG   I LG G +  QC  A+ ++  EG        ++F+R C                              V  + L ++Y  PAST+G+ER HKV KRIH+S R R G   +++Q AVAHNAA
Sbjct:  125 RLAKVKRPMTAVVTAVMNEKVERNIDPSYQLPSEFTSKVMDPQFWGNVSWHVKVFDPICKCIGVMESNSATMSTAYACFVY--VFIHARETFPGDALL--TKLIHRWNRIQSPVHALAFYCDPFYHPFRLAVAKLYGQDPIELGKGDICAQCRFAIELVCREGQDQKRRALDDFLRFCTTEAEIASEWSSITQFPPQKIWTQGRSKFPVLAELLVKVYTSPASTAGVERQHKVGKRIHSSARNRLGAGLVEEQAAVAHNAA 381          
BLAST of Ggra600.t1 vs. uniprot
Match: A0A833TLY3 (HAT family C-terminal dimerization region n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TLY3_PHYIN)

HSP 1 Score: 156 bits (395), Expect = 2.690e-39
Identity = 96/249 (38.55%), Postives = 139/249 (55.82%), Query Frame = 0
Query:    1 MFERLLQVKSVITFIPYVLLHERHSLGVDSDYQLPGELVQINSDSQYWNGVQKARALFAQICSCIGVLEGDSAPMSLAYACFLYIRVLLWTQKGFQEDTVAFENRSLYQWSRISSPVHALAFFCDSLFKSMRHSLTETYGDGFIGLGNGPLATQCHEAL----------AMMAEEGFYL------EILTEEFMRHCVSPKTLKRIYKGPASTSGIERSHKVEKRIHTSRRARTGEKKIKKQVAVAHNAA 233
            MF+RL +VK  +T +   +++E+    +D  YQLP E   I  D Q+W  V     +F  IC CIGV+E +SA MS AYACF+Y  V +  ++ F  D +    + +++W+RI SPVHA AF+CD  +   R ++ + YG   I LG G +  Q   AL          A +A E   +      +I T+   +  V  + L ++Y  PAST+G+ER HKV KRIH+S R R G   +++Q AVAHNAA
Sbjct:  297 MFQRLAKVKRPMTAVVTAVMNEKVERNIDPSYQLPSEFTSIAMDPQFWGNVSWHIKVFDPICKCIGVMESNSATMSTAYACFVY--VFIHARETFPGDALL--TKLIHRWNRIQSPVHASAFYCDPFYHPFRLAVAKLYGQDPIELGKGDIY-QKRRALDDFLRFCTTEAEIASEWSSITQFPPQKIWTQGRSKFPVLAELLVKVYTSPASTAGVERQHKVGKRIHSSARNRLGAGLVEEQAAVAHNAA 540          
BLAST of Ggra600.t1 vs. uniprot
Match: A0A6A3YRQ0 (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3YRQ0_9STRA)

HSP 1 Score: 154 bits (389), Expect = 2.810e-39
Identity = 92/280 (32.86%), Postives = 138/280 (49.29%), Query Frame = 0
Query:    1 MFERLLQVKSVITFIPYVLLHERHSLGVDSDYQLPGELVQINSDSQYWNGVQKARALFAQICSCIGVLEGDSAPMSLAYACFLYIRVLLWTQKGFQEDTVAFENRSLYQWSRISSPVHALAFFCDSLFKSMRHSL---TETYGDGFIGLGNGPLATQCHEALAMMA----EEGFYLEILTEEFMRHCVSP------------------------------KTLKRIYKGPASTSGIERSHKVEKRIHTSRRARTGEKKIKKQVAVAHNAAPLRKTLISKR 243
            MF RL  VK  IT +   +L+E+    +D  Y+LP E V    D  +W  +  + ++F  IC CIGVLE +SA +   YACF+Y+ + +       +D      +  Y+W RI+SPVHALAF+CD  +   R S+   T+      + LG G L TQC  A+  +     + G     + +EF+   +S                               K + +++  PAST+G+ER HKV KRIH++ R R    K ++Q+AVAHNAA     L++ R
Sbjct:  186 MFVRLRHVKRAITGVVSAVLNEKEERAIDEAYELPAEFVTTVMDGSFWRSISTSVSIFDPICKCIGVLENNSASLGAVYACFVYVYLHIGRVMD-DKDATYLRKKLEYRWDRIASPVHALAFYCDPFYFPFRRSVAASTDQVSKKALQLGKGDLYTQCRNAIETLCRLDDDSGVECTSILQEFLTFSLSDSEVATMWGDPTKFWSEKLWSQGQGDFPLLGKLMMKVFSAPASTAGVERHHKVAKRIHSAPRNRMTSGKAEQQIAVAHNAAVADMVLLNHR 464          
BLAST of Ggra600.t1 vs. uniprot
Match: A0A1V9YJH7 (DUF659 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YJH7_9STRA)

HSP 1 Score: 116 bits (291), Expect = 5.140e-25
Identity = 87/296 (29.39%), Postives = 135/296 (45.61%), Query Frame = 0
Query:    1 MFERLLQVKSVITFIPYVLLHERHSLGVDSDYQLPGELVQINSDSQYWNGVQKARALFAQICSCIGVLEGDSAPMSLAYACFLYIRVLL-------WTQKGFQEDTVA-FENRSLYQWSRISSPVHALAFFCDSLFKSMRHSLTETYGDGFIGLGNGPLATQCHEALAMMA----EEGFYLEILTEEFMRHCV-SPKT-----------------------------LKRIYKGPASTSGIERSHKVEKRIHTSRRARTGEKKIKKQVAVAHNAAPLRKTLISKRTNCFDLKIASL 254
            M ER+L+++ V+  +P       H  G D DY++   L    +D  YW  V    ++   I   +  LEGD  P+S  YA F++I+V +       WT   ++ D  A    R +YQ+ RIS+PVHALAF CD +F  MR  +   YG  FI +G+  L +    A+ ++     EE  Y  +  EEF   C   P T                             L  ++  P S +  ER+HK  K I T  RA     K++ Q A+A+NA+   +  +++R++ F+  +  L
Sbjct:  347 MLERVLKLRPVLAALP------GHVAGQDVDYEIEEPLAATVNDRGYWKSVDVMCSIMKSITDALVYLEGDGTPLSAVYATFVWIKVHIHEIAPAAWTALRYKGDAKAHLLGRFVYQFDRISTPVHALAFRCDPVFDGMRQRVASKYGVNFINIGSKELLSTARSAIDLLLRKENEERQYATL--EEFCAFCEREPSTFDVFAAMANLMPRLVWGQARGLYSNLADLLVPVFSCPTSAAAGERNHKTSKAILTRNRASLMAAKVEMQCAIAYNASQKTRLHVTRRSSKFNKTLIDL 634          
BLAST of Ggra600.t1 vs. uniprot
Match: A0A833SMH8 (HAT family C-terminal dimerization region n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SMH8_PHYIN)

HSP 1 Score: 107 bits (268), Expect = 6.670e-24
Identity = 66/190 (34.74%), Postives = 98/190 (51.58%), Query Frame = 0
Query:   75 MSLAYACFLYIRVLLWTQKGFQEDTVAFENRSLYQWSRISSPVHALAFFCDSLFKSMRHSLTETYGDGFIGLGNGPLATQCHEALAMMA-EEGFYLEILTEEFMRHC------------------------------VSPKTLKRIYKGPASTSGIERSHKVEKRIHTSRRARTGEKKIKKQVAVAHNAA 233
            MS AYACF+Y  V +  ++ F  D +    + +++W+RI SPVHALAF+CD  +   R ++ + YG     LG G +  QC  A+ ++  E+        ++F+R C                              V  + L ++Y  PAST+G+ER HKV KRIH+S R R G   +++Q AVAHNAA
Sbjct:    1 MSTAYACFVY--VFIHARETFPGDALL--TKLIHRWNRIQSPVHALAFYCDPFYHPFRLTVAKLYGQDPTELGKGDICAQCRFAIELVCREDQDQKRRALDDFLRFCTTEAEIASEWSSITQFPPQKIWTQGRSKFPVLAELLVKVYTSPASTAGVERQHKVGKRIHSSARNRLGAGLVEEQAAVAHNAA 186          
BLAST of Ggra600.t1 vs. uniprot
Match: A0A329RQ41 (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RQ41_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 3.750e-8
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 0
Query:  188 RIYKGPASTSGIERSHKVEKRIHTSRRARTGEKKIKKQVAVAHNAAPLRKTLISKRTNCFDLKIASLSFATSPETS 263
            ++Y  PAST+G+ER+HKV KRIH++ R RT   K+++QVAVAHN+  L   + S R   F+  I    F  + ETS
Sbjct:    2 KVYSAPASTAGVERNHKVAKRIHSASRNRTSRGKVEEQVAVAHNSVVLDLEIDSYRQK-FEEYIVRNPFGANTETS 76          
BLAST of Ggra600.t1 vs. uniprot
Match: A0A6A3G631 (Dimer_Tnp_hAT domain-containing protein n=13 Tax=Phytophthora TaxID=4783 RepID=A0A6A3G631_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 2.080e-6
Identity = 31/76 (40.79%), Postives = 49/76 (64.47%), Query Frame = 0
Query:  184 KTLKRIYKGPASTSGIERSHKVEKRIHTSRRARTGEKKIKKQVAVAHNAAPLRKTLISKRTNCFDLKIASLSFATS 259
            K + +++  PAST+G+ER HKV KRIH++ R R    K ++Q+AVA+NAA     L++ R  CF++ +    F +S
Sbjct:   26 KLMMKVFSAPASTAGVERHHKVAKRIHSAPRNRMTSGKAEQQIAVAYNAAVADMVLLNHR-QCFEVYMREYPFGSS 100          
The following BLAST results are available for this feature:
BLAST of Ggra600.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A833SXF73.500e-4136.02HAT family C-terminal dimerization region n=1 Tax=... [more]
A0A833TLY32.690e-3938.55HAT family C-terminal dimerization region n=1 Tax=... [more]
A0A6A3YRQ02.810e-3932.86Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ph... [more]
A0A1V9YJH75.140e-2529.39DUF659 domain-containing protein n=1 Tax=Achlya hy... [more]
A0A833SMH86.670e-2434.74HAT family C-terminal dimerization region n=1 Tax=... [more]
A0A329RQ413.750e-846.05Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
A0A6A3G6312.080e-640.79Dimer_Tnp_hAT domain-containing protein n=13 Tax=P... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 316..343
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..343
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..310

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000203_piloncontigtig00000203_pilon:68811..69947 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra600.t1Ggra600.t1Gracilaria gracilis GNS1m malemRNAtig00000203_pilon 68811..69947 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra600.t1 ID=Ggra600.t1|Name=Ggra600.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=352bp
MFERLLQVKSVITFIPYVLLHERHSLGVDSDYQLPGELVQINSDSQYWNG
VQKARALFAQICSCIGVLEGDSAPMSLAYACFLYIRVLLWTQKGFQEDTV
AFENRSLYQWSRISSPVHALAFFCDSLFKSMRHSLTETYGDGFIGLGNGP
LATQCHEALAMMAEEGFYLEILTEEFMRHCVSPKTLKRIYKGPASTSGIE
RSHKVEKRIHTSRRARTGEKKIKKQVAVAHNAAPLRKTLISKRTNCFDLK
IASLSFATSPETSPDTLQTSASNENTNGLVTSSPPEESQDTAASTSELNQ
ISTSGADGIATVVESFNHEEPEEELHLEAGLDSIETADDNPDHAIYNLED
W*
back to top