Ggra5932.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5932.t1
Unique NameGgra5932.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length190
Homology
BLAST of Ggra5932.t1 vs. uniprot
Match: R7QQ84 (Protein-S-isoprenylcysteine O-methyltransferase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQ84_CHOCR)

HSP 1 Score: 193 bits (491), Expect = 1.320e-59
Identity = 103/190 (54.21%), Postives = 130/190 (68.42%), Query Frame = 0
Query:    4 IVIFSASLLFYHLSELFLVYTYTPEELSPSSALLSVPYLIAMALGILEYKITLSLFPDIKTYFLRVLQLPAIILLVI----GESLRKAAWLTAKPSFTHLIKETRRPSHKLVTHGVYAFCRHPGYLGWFLWAVATQLLLANFLCTPAFAIIAWKFFRERIPIEEFYLRRMFGSSYDQYRIKTPTFFPGVP 189
            +++FS SLL YH  E+ LV  +TP E   SS L S  Y++AM L +LEY +T   FP  KT     L+LP ++L  +    G+ LRK AWLTA+ SFTH I+ TRRP+H LV  GVYA+ RHP YLGWF+WAV TQ+LLAN + + AFA+ AW+FFR RIP+EE YL RMFG  Y+ YR  TPT  PG+P
Sbjct:   11 LILFSLSLLVYHALEVLLVLFHTPAEFDRSSFLFSPAYVLAMTLSLLEYLLTWRFFPAFKT----TLRLPGLLLGAVLAFSGDLLRKLAWLTARHSFTHRIQTTRRPAHVLVRKGVYAWARHPAYLGWFVWAVGTQVLLANLVSSVAFALAAWRFFRHRIPVEEHYLVRMFGREYELYRQNTPTRIPGIP 196          
BLAST of Ggra5932.t1 vs. uniprot
Match: A0A2V0PKZ2 (Protein-S-isoprenylcysteine O-methyltransferase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PKZ2_9CHLO)

HSP 1 Score: 186 bits (471), Expect = 1.770e-56
Identity = 100/178 (56.18%), Postives = 123/178 (69.10%), Query Frame = 0
Query:    7 FSASLLFYHLSELFLVYTYTPEELSPSSALLSVPYLIAMALGILEYKITLSLFPDIKTYFLRVLQLPAIILLVIGESLRKAAWLTAKPSFTHLIKETRRPSHKLVTHGVYAFCRHPGYLGWFLWAVATQLLLANFLCTPAFAIIAWKFFRERIPIEEFYLRRMFGSSYDQYRIKTPTF 184
            F+A+L F+H SE  +      E LS  S L+S PY+IAMA G+ E+    SL PD+K      L L  + LLV GE+LRKAA LTA+ +FTH I+  RRP H+LVT GVY + RHPGYLGWF+WAVA QLLLAN +C  AFA ++W+FFRERI  EE  LRRMFG++YD Y   TPTF
Sbjct:    8 FAAALAFFHTSEFLIAAATDRENLSSRSLLISRPYVIAMASGLGEFAAEASLAPDLKRRLAERLSLLGLALLVAGEALRKAAMLTARRAFTHDIQYERRPGHELVTRGVYRYIRHPGYLGWFVWAVAGQLLLANPVCAVAFAYVSWRFFRERIAFEESTLRRMFGAAYDAYATATPTF 185          
BLAST of Ggra5932.t1 vs. uniprot
Match: A0A7J7PQE3 (Protein-S-isoprenylcysteine O-methyltransferase n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PQE3_9CHLO)

HSP 1 Score: 177 bits (449), Expect = 2.320e-53
Identity = 95/186 (51.08%), Postives = 125/186 (67.20%), Query Frame = 0
Query:    4 IVIFSASLLFYHLSELFLVYTYTPEELSPSSALLSVPYLIAMALGILEYKITLSLFPDIKTYFLRVLQLPAIILLVIGESLRKAAWLTAKPSFTHLIKETRRPSHKLVTHGVYAFCRHPGYLGWFLWAVATQLLLANFLCTPAFAIIAWKFFRERIPIEEFYLRRMFGSSYDQYRIKTPTFFPGVP 189
            +++F+ SL F+H SE  L  TY  +ELS  S L+S  Y+IAM+ G+LEY +  +L P +K   L  +    + LLV+GE +RKAA +TA  +FTH I+ TR+P H LVT G+Y   RHPGY+GWFLW+V TQLLL N  CT AFA ++W+FF +RI  EEFYLRR FG  Y QY   TP+   G+P
Sbjct:    4 LLVFAGSLAFFHASEFLLAATYMRDELSTRSLLISKAYIIAMSCGVLEYLLESALLPSLKQ--LHAVSYCGLALLVLGEFVRKAAMITAASNFTHDIRRTRQPGHVLVTRGIYRCVRHPGYMGWFLWSVGTQLLLVNPGCTLAFAYVSWRFFYDRIQYEEFYLRRFFGEQYLQYSDCTPS---GIP 184          
BLAST of Ggra5932.t1 vs. uniprot
Match: C1E5R5 (Protein-S-isoprenylcysteine O-methyltransferase n=2 Tax=Micromonas TaxID=38832 RepID=C1E5R5_MICCC)

HSP 1 Score: 175 bits (443), Expect = 3.390e-52
Identity = 91/186 (48.92%), Postives = 128/186 (68.82%), Query Frame = 0
Query:    7 FSASLLFYHLSELFLVYTYTPEELSPSSALLSVPYLIAMALGILEYKITLSLFPDIKTYFLRVLQLPAII---LLVIGESLRKAAWLTAKPSFTHLIKETRRPSHKLVTHGVYAFCRHPGYLGWFLWAVATQLLLANFLCTPAFAIIAWKFFRERIPIEEFYLRRMFGSSYDQYRIKTPTFFPGVP 189
            F ++L FYHLSE  + + +  E LS  S LLS  Y++AM+ G +EY + L+LFP  K   L  L+  A I   ++V G++LRKAA +TA+ +FTH I+ +RRP+H++V+HGVYA+CRHPGYLGW  W+V TQ++L N +C   FA+ +W+FF  RIP EE  LRRMF   Y+ Y  +T T+ PG+P
Sbjct:   21 FVSALCFYHLSEYGIAWAFNRETLSRDSWLLSRQYVVAMSAGCVEYFVELALFPGFKRGDLGALRWIARIGLAMVVWGDALRKAAQITARHNFTHQIQFSRRPTHRVVSHGVYAWCRHPGYLGWLTWSVGTQVMLMNPICAVGFAVASWRFFATRIPFEEGLLRRMFPGEYEAYAARTRTWIPGIP 206          
BLAST of Ggra5932.t1 vs. uniprot
Match: A0A7S1TIP3 (Protein-S-isoprenylcysteine O-methyltransferase n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIP3_9RHOD)

HSP 1 Score: 172 bits (436), Expect = 2.860e-51
Identity = 92/177 (51.98%), Postives = 121/177 (68.36%), Query Frame = 0
Query:   14 YHLSELFLVYTYTPEELSPSSALLSVPYLIAMALGILEYKITLSLFPDIKT-YFLRVLQLP-AIILLVIGESLRKAAWLTAKPSFTHLIKETRRPSHKLVTHGVYAFCRHPGYLGWFLWAVATQLLLANFLCTPAFAIIAWKFFRERIPIEEFYLRRMFGSSYDQYRIKTPTFFPGV 188
            YHLSE  LV  +TPEE    S L S  Y+ AM +  +E+ +    +P  K  ++ R    P A+ ++V+GE LRKAAWLT K +FTH I+  RRP H LVTHGVYA+ RHPGYLGW+ W++ TQLLLAN + T  FA+I W FFR+RIPIE+++L +MFG+ Y+ Y   TPT FPG+
Sbjct:   19 YHLSEALLVRWWTPEEFGLDSFLFSRGYVGAMLIAWMEFAVESWTWPGAKERWWWRPGGFPLALAVVVLGEMLRKAAWLTGKAAFTHRIQTRRRPHHVLVTHGVYAWSRHPGYLGWWWWSIGTQLLLANPISTILFAVIGWNFFRKRIPIEDYHLHKMFGNEYNSYYRNTPTRFPGI 195          
BLAST of Ggra5932.t1 vs. uniprot
Match: A0A1X6NJ20 (Protein-S-isoprenylcysteine O-methyltransferase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJ20_PORUM)

HSP 1 Score: 170 bits (431), Expect = 1.360e-50
Identity = 94/177 (53.11%), Postives = 113/177 (63.84%), Query Frame = 0
Query:    7 FSASLLFYHLSELFLVYTYTPEELSPSSALLSVPYLIAMALGILEYKITLSLFPDIKTYFLRVLQLPAIILLVIGESLRKAAWLTAKPSFTHLIKETRRPSHKLVTHGVYAFCRHPGYLGWFLWAVATQLLLANFLCTPAFAIIAWKFFRERIPIEEFYLRRMFGSSYDQYRIKTPT 183
            F+A LL YH SEL LV TYTPE LS +S LLS  YL+AMAL + E+    +L P  K   L     P + +  +GE+LR AAW TA+  FTH I+  RRP H L+THGVYA+ RHPGYLGW +WAV TQL+L N     AFA ++W FFR RI  EE  L  MFG  Y  YR + PT
Sbjct:    9 FAALLLLYHGSELALVATYTPEHLSAASLLLSPSYLLAMALALAEHAAERALVPAYKAQVLAATFGPGLAVTAVGEALRIAAWATARGCFTHRIQHKRRPGHVLITHGVYAWVRHPGYLGWGVWAVGTQLVLGNVAAAVAFAGVSWVFFRRRIRTEEAALVAMFGDEYRAYRRRVPT 185          
BLAST of Ggra5932.t1 vs. uniprot
Match: A0A8J4C5E6 (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4C5E6_9CHLO)

HSP 1 Score: 167 bits (423), Expect = 2.420e-49
Identity = 87/187 (46.52%), Postives = 122/187 (65.24%), Query Frame = 0
Query:    5 VIFSASLLFYHLSELFLVYTYTPEELSPSSALLSVPYLIAMALGILEYKITLSLFPDIKTYF--LRVLQLPAIILLVIGESLRKAAWLTAKPSFTHLIKETRRPSHKLVTHGVYAFCRHPGYLGWFLWAVATQLLLANFLCTPAFAIIAWKFFRERIPIEEFYLRRMFGSSYDQYRIKTPTFFPGVP 189
            ++F ASL F+H SE  L   +T +ELS +S L+S PY+ AMA  +LEY       P +K     +  +    +IL+V+GE +RK    TAK +FTH ++ TR+P+H LV  G+Y + RHPGYLGW++W + TQ+LL N LC   FA +AW+FF  RI IEE+YLR+ FGS+Y  Y  +TPT+ P +P
Sbjct:    7 ILFFASLAFFHCSEFLLALIFTRDELSMNSWLISKPYVTAMAFAVLEYVFESWATPALKVGSGGMGYVSWLGLILIVLGEGIRKLGIFTAKSNFTHNMRTTRQPTHVLVMRGIYRYIRHPGYLGWYIWCLGTQVLLGNPLCFFGFAAVAWRFFSTRIKIEEYYLRQFFGSAYLAYAARTPTWIPMIP 193          
BLAST of Ggra5932.t1 vs. uniprot
Match: A8HPP9 (Protein-S-isoprenylcysteine O-methyltransferase n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8HPP9_CHLRE)

HSP 1 Score: 163 bits (412), Expect = 4.050e-48
Identity = 82/162 (50.62%), Postives = 106/162 (65.43%), Query Frame = 0
Query:   28 EELSPSSALLSVPYLIAMALGILEYKITLSLFPDIKTYFLRVLQLPAIILLVIGESLRKAAWLTAKPSFTHLIKETRRPSHKLVTHGVYAFCRHPGYLGWFLWAVATQLLLANFLCTPAFAIIAWKFFRERIPIEEFYLRRMFGSSYDQYRIKTPTFFPGVP 189
             ELS +S L S PY +AM   ILEY +   L P +K Y    L    ++L+V+GE +RK   LTA+ +FTH I+  R   H LVTHG+Y + RHPGYLGW++W V TQ+LL N     AFAI+AW+FFRERI  EE+YLRR FG  Y+ Y  +TPT+ P +P
Sbjct:    3 HELSWNSWLFSRPYTVAMGFAILEYSVEALLVPGLKGY----LPWLGVVLIVLGEGIRKVGMLTAQSNFTHNIRVRRDERHALVTHGIYRYVRHPGYLGWYIWCVGTQVLLCNPFSIVAFAIVAWRFFRERIEYEEYYLRRFFGYQYEAYAARTPTWLPFIP 160          
BLAST of Ggra5932.t1 vs. uniprot
Match: protein-S-isoprenylcysteine O-methyltransferase A n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F9B1F (protein-S-isoprenylcysteine O-methyltransferase A n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F9B1F)

HSP 1 Score: 163 bits (413), Expect = 8.910e-48
Identity = 82/183 (44.81%), Postives = 122/183 (66.67%), Query Frame = 0
Query:    7 FSASLLFYHLSELFL-VYTYTPEELSPSSALLSVPYLIAMALGILEYKITLSLFPDIKTYFLRVLQLPAIILLVIGESLRKAAWLTAKPSFTHLIKETRRPSHKLVTHGVYAFCRHPGYLGWFLWAVATQLLLANFLCTPAFAIIAWKFFRERIPIEEFYLRRMFGSSYDQYRIKTPTFFPGV 188
            F A++LF+H+SE FL ++ +    ++  S L++  Y++A+   +LEY + ++ FP +K Y+   +    + +++IGE++RK A +TA  +FTHLIK      H+LVTHG+Y F RHPGY G+F+W+V TQ++L N +CTPAFAI+ WKFF  RIP EEF+LR  F   YD Y  K P+  P V
Sbjct:   16 FLAAILFFHISEYFLSIFVHGRSNVTLKSLLITKNYIVAIVCSLLEYWLEVTYFPALKEYWW--ISNLGLAMVIIGETIRKVAMVTAGRAFTHLIKIHHEEQHRLVTHGIYGFVRHPGYCGFFIWSVGTQIMLLNPICTPAFAIVVWKFFAGRIPYEEFFLREFFEDEYDSYAQKVPSGIPFV 196          
BLAST of Ggra5932.t1 vs. uniprot
Match: D8UDG1 (Protein-S-isoprenylcysteine O-methyltransferase n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UDG1_VOLCA)

HSP 1 Score: 161 bits (407), Expect = 5.160e-47
Identity = 83/185 (44.86%), Postives = 115/185 (62.16%), Query Frame = 0
Query:    7 FSASLLFYHLSELFLVYTYTPEELSPSSALLSVPYLIAMALGILEYKITLSLFPDIKTYF--LRVLQLPAIILLVIGESLRKAAWLTAKPSFTHLIKETRRPSHKLVTHGVYAFCRHPGYLGWFLWAVATQLLLANFLCTPAFAIIAWKFFRERIPIEEFYLRRMFGSSYDQYRIKTPTFFPGVP 189
            F A L F+H SE  L   +  +ELS  S L+S  Y+ AMA  +LEY +     P IK     +  +    + L+++GE +RK   +TA+ +FTH I+  R P+H LVT G+Y F RHPGYLGWF+W + TQ+LL N +C   FA++AW+FF  RI  EE YLR+ FG +YD Y  +TPT+ P +P
Sbjct:    2 FIAVLAFFHCSEFLLACIFMRDELSIRSWLISKAYVTAMAFALLEYLLEACAVPSIKIGDGGMGTISWLGLSLVLLGEGIRKLGMITARSNFTHNIRTKRHPTHVLVTRGIYRFIRHPGYLGWFMWCLGTQMLLGNPICVIGFAVVAWRFFSSRIATEETYLRQFFGDAYDTYAARTPTWIPFIP 186          
The following BLAST results are available for this feature:
BLAST of Ggra5932.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QQ841.320e-5954.21Protein-S-isoprenylcysteine O-methyltransferase n=... [more]
A0A2V0PKZ21.770e-5656.18Protein-S-isoprenylcysteine O-methyltransferase n=... [more]
A0A7J7PQE32.320e-5351.08Protein-S-isoprenylcysteine O-methyltransferase n=... [more]
C1E5R53.390e-5248.92Protein-S-isoprenylcysteine O-methyltransferase n=... [more]
A0A7S1TIP32.860e-5151.98Protein-S-isoprenylcysteine O-methyltransferase n=... [more]
A0A1X6NJ201.360e-5053.11Protein-S-isoprenylcysteine O-methyltransferase n=... [more]
A0A8J4C5E62.420e-4946.52Uncharacterized protein n=1 Tax=Volvox reticulifer... [more]
A8HPP94.050e-4850.62Protein-S-isoprenylcysteine O-methyltransferase n=... [more]
protein-S-isoprenylcysteine O-methyltransferase A n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F9B1F8.910e-4844.81protein-S-isoprenylcysteine O-methyltransferase A ... [more]
D8UDG15.160e-4744.86Protein-S-isoprenylcysteine O-methyltransferase n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.120.1630coord: 3..188
e-value: 5.7E-32
score: 113.0
NoneNo IPR availablePANTHERPTHR12714:SF9PROTEIN-S-ISOPRENYLCYSTEINE O-METHYLTRANSFERASEcoord: 5..187
NoneNo IPR availablePANTHERPTHR12714PROTEIN-S ISOPRENYLCYSTEINE O-METHYLTRANSFERASEcoord: 5..187
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 85..126
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..53
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 153..189
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 127..152
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 65..84
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 54..64
NoneNo IPR availableTMHMMTMhelixcoord: 64..81
NoneNo IPR availableTMHMMTMhelixcoord: 127..149
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
NoneNo IPR availableTMHMMTMhelixcoord: 37..59
IPR007269Isoprenylcysteine carboxyl methyltransferasePFAMPF04140ICMTcoord: 75..166
e-value: 1.3E-26
score: 92.8
IPR025770Protein-S-isoprenylcysteine O-methyltransferasePROSITEPS51564SAM_ICMTcoord: 6..189
score: 20.89695

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000068_piloncontigtig00000068_pilon:600987..601556 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5932.t1Ggra5932.t1Gracilaria gracilis GNS1m malemRNAtig00000068_pilon 600987..601556 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5932.t1 ID=Ggra5932.t1|Name=Ggra5932.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=190bp
MDAIVIFSASLLFYHLSELFLVYTYTPEELSPSSALLSVPYLIAMALGIL
EYKITLSLFPDIKTYFLRVLQLPAIILLVIGESLRKAAWLTAKPSFTHLI
KETRRPSHKLVTHGVYAFCRHPGYLGWFLWAVATQLLLANFLCTPAFAII
AWKFFRERIPIEEFYLRRMFGSSYDQYRIKTPTFFPGVP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007269ICMT_MeTrfase
IPR025770PPMT_MeTrfase