Ggra5912.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5912.t1
Unique NameGgra5912.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length236
Homology
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BLAST of Ggra5912.t1 vs. uniprot
Match: A0A2V3INQ8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INQ8_9FLOR)

HSP 1 Score: 188 bits (477), Expect = 2.960e-56
Identity = 101/220 (45.91%), Postives = 146/220 (66.36%), Query Frame = 0 
Query:    9 EQPAHIRLNAKQVEALLDCVGDTVFKPALVREIRRNVRVIHPSDFPVKPVEPSQITRLAESTKRAQAMVAKLHAVRQAHTDLLRREIQRTHEQATQL--PSVPAQQLEPNVQLQSLAGQVNEHINGTVDFIYKLVAASEDTNKRVQNVSKALEIANSDVNVADHSIIADWTGTFTDIG--DQDIEIPIKPTEEVESYPDSPFVTPRSKMRKRAAMMSRMS 224
            EQ  HI LN K+V+ALL C   TV +  LV++ RR++R++HPSD+P+ P+  S+  +LA+ST RA  ++ +L  VRQ H   L+  ++R+H++A +   P  P    E  + LQSLA Q++  I  T  FI+ L  AS DTN+RV+NV+ AL IA++     +H ++ DWT TF DI   + D  IP +PTEE+++YPD PFVTPRSKMRKR A MS+++
Sbjct:    8 EQSKHIPLNEKRVDALLQCFEGTVLEQQLVKQARRSIRLVHPSDYPLSPIPDSKRKQLADSTNRAAQLLNRLQQVRQTHAQQLQLNVERSHKRAAEFSPPPSPPSFDENRIILQSLAEQLDTRITHTAHFIHNLAVASADTNRRVENVTNALAIASNSAPDQNH-LVNDWTDTFADINHHEHDYHIPNEPTEEIDTYPDEPFVTPRSKMRKRVAAMSKLA 226
The following BLAST results are available for this feature:
BLAST of Ggra5912.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3INQ82.960e-5645.91Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..235

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000068_piloncontigtig00000068_pilon:496171..496878 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5912.t1Ggra5912.t1Gracilaria gracilis GNS1m malemRNAtig00000068_pilon 496171..496878 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5912.t1 ID=Ggra5912.t1|Name=Ggra5912.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=236bp
MSALAPEPEQPAHIRLNAKQVEALLDCVGDTVFKPALVREIRRNVRVIHP
SDFPVKPVEPSQITRLAESTKRAQAMVAKLHAVRQAHTDLLRREIQRTHE
QATQLPSVPAQQLEPNVQLQSLAGQVNEHINGTVDFIYKLVAASEDTNKR
VQNVSKALEIANSDVNVADHSIIADWTGTFTDIGDQDIEIPIKPTEEVES
YPDSPFVTPRSKMRKRAAMMSRMSPGKRSISKLPR*
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