Ggra5904.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5904.t1
Unique NameGgra5904.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length694
Homology
The following BLAST results are available for this feature:
BLAST of Ggra5904.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 459..477
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 441..477
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 644..665
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 651..665
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 441..458
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..669
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 691..693
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 670..690
NoneNo IPR availableTMHMMTMhelixcoord: 670..692

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000068_piloncontigtig00000068_pilon:475049..477130 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5904.t1Ggra5904.t1Gracilaria gracilis GNS1m malemRNAtig00000068_pilon 475049..477130 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5904.t1 ID=Ggra5904.t1|Name=Ggra5904.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=694bp
MSQGKSDIGSEQTDSGKAAVKVAAVVEWAVKALPNDYVELDHNGRSGQPG
CQDEMANNGKREIMRKKFSSLRIKCTGGKLPRMPSSTSMESTRRRISNLV
KSMPCLRRTFKERNGGTRNCDPSRSGFHVAAENADRQGKPGGAPRLNGHV
VPLSMAQAPINRAVESTKLADCSKWAVYPTKYGTLHRMESMKGGEEALRS
GNSSMLLSSPPADVFPGRVARLRDIFEKDGAPLFQGMTGQERERQESASS
SIGAVLSRSENVCSAHVGTNAATHGDGSRLTYRSECFTEKDADFGNLESG
WSGRTESPPVKSWLSDEEKAGSGEREAIVNRTIYENGTVSAGCDVGSPAI
EGQQTTNIMPKTQGCEGEDHWELFDKNQLAFKGDERSYADSTNETFSFSN
LNKLNDTPLKATPIEDACATSFSSLHSKAFETSKPVSPVELKTTSPCHSS
ISEKRSHISPQSASDDEVRENSVKGGRTKERNALLRCHISGNLSSLQHQD
SCSRINPNELSKKCVQTPKCLTSRDVEEMTCSSTERKTSKPSVVNSRKKS
TENSCLNEMLKTSGNHVTTWKENSHDELNKEISVDQSYQISVLENDALEI
DHASSGEFSSDWLHFIDEPKEEEWDEYVDHYVDSGDESCGQCIGPEPEKL
PTRNPEGEEKEEQHGKAKMFATHFSVIFILLTLHLLSINIELR*
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