Ggra5848.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5848.t1
Unique NameGgra5848.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length893
Homology
BLAST of Ggra5848.t1 vs. uniprot
Match: A0A2V3IDD0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDD0_9FLOR)

HSP 1 Score: 241 bits (615), Expect = 9.640e-64
Identity = 446/931 (47.91%), Postives = 513/931 (55.10%), Query Frame = 0
Query:    1 MTQELAGAP-AAPDHDAELEREVDRIQRTAEKQLAAVAGLNSSLAKKIRKAEAQTATLLSANKELEDKNAHLVEQLQRAHEDVRVLSVEHERADKLHSRVTELNSALVAAELALKKSDANVDSLKAERDIASSELHNTKLKLDAQSHELHQLQQSAENDKAHMDTVVSERTLALDTLTKDKQSVDTENKKLSDQLLERDARLTDADNHLKQEKEEKERLVTDYDKKLADTTQQITVLQANIKDRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSNKEKDHTKAQLESRNLLFVNVDKERNTLKTEKESVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQDMIAAHADEMAEAMLKKDQEFALRNAALRKELDDVVDRHADVQR-----------------KEIQRDTALVEGTLEEFPATPTPTPV---GERSSTQDATKDEIADMGSGNVVMEQDETDATAAXXXXXXXXXXXXXXXXXXXXXXXXXXSGEEEVQEV-GDQVEKVQEEGGTEEVPTVVERAAQLEVPTEMPAEPTTPVPDEVEEVVQEADDAVSPEGVAVM--------TREV------VEEXXXXXXXXXXXXADPEEGDTNVVXXXXXXXXXXXXRAAD-VVADDVLEHVEEEELLDDATAAEKREKALGVKAAVEEASGNGAEGDKTVVEDAKDAVEGAAANGAQVASGAKD-AVVDGGETAKGSAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVAAGATTTVKDKAGALKSAVASKTDDAQGTKKKTNGKWNKLLCCFAPSS-EDGARAAS 892
            MTQ+ A  P    DHDAELEREVDRIQRTAEKQLAAVAGLNSSLAKKI K+EAQTATLLS NKELEDKNAHLV QL  A ++V+ LS EH RADKL   +   +++L  A+L L+                                                                                                         ++Y+ KL+   QQI +L               XXXXXXXXXXXXXXXXXXXXXXXXXXXXX   XX             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         + KEKDHTK +L+SRNL FV ++ E   LK++K+ +       XXXXXXXXXXXXXXXXXXXXXXXXXXXXX        Q+  MIAAH  EMA+AMLKKDQE+ALR+AALRKE+DDVVDRHAD Q                  KE Q+     EG   EFP TP PTPV   G+ ++  D    +   M  G+VV+E+ +T                                 EE++ E  GD   K+Q+   TE+V + VE+A  LE PT+MP++P  P+   V +   + +DA+SP+G AVM        T EV      VEE             DP EGDTN++            R  +  V DDVLEHVEEEELLDDATAAE+REKALGVKAA  +A G G         DA  A E AAAN  +   G K  AVV+G E A            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  SA  +++ DA  +KKKTNGKWNKLLCCFAPS+ ED  RAAS
Sbjct:    1 MTQQTAAVPPVGTDHDAELEREVDRIQRTAEKQLAAVAGLNSSLAKKILKSEAQTATLLSVNKELEDKNAHLVTQLSVAQQEVKSLSAEHARADKLDRHLQLSSASLATAQLDLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEYESKLSSLQQQILILTDKENHLNNQLHASNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDQLTRADTQIDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDLQTQVETTTKEKDHTKTELQSRNLAFVGIENESTALKSDKQKLEKELVHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTIDQLEQQKTVMIAAHQKEMADAMLKKDQEYALRHAALRKEVDDVVDRHADSQXXXXXXXXXXXXXXXXXDKE-QQTVHTEEGASREFPLTPAPTPVAEDGDAAAAGDVEPPQPIPMMEGDVVVERRDTSTADTGAEPDLVVV-------------------EEKLTEPEGDT--KLQQ---TEQV-SAVEKARALEPPTDMPSDPVVPLSTHVAD---DVEDAISPDGTAVMVAEDEKQPTEEVEERFEDVEEKVVEEVTTDKGAVDPGEGDTNIISEEVLDEVVVDDRGGEHPVDDDVLEHVEEEELLDDATAAERREKALGVKAAAPDAEGAG---------DA--AAEAAAANATE---GEKTKAVVEGAEAAAEKTVQAGTEVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-----------SAAQTQSRDADDSKKKTNGKWNKLLCCFAPSAVEDTPRAAS 877          
BLAST of Ggra5848.t1 vs. uniprot
Match: R7QQC0 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQC0_CHOCR)

HSP 1 Score: 127 bits (320), Expect = 1.940e-26
Identity = 191/489 (39.06%), Postives = 255/489 (52.15%), Query Frame = 0
Query:    1 MTQELAGAPAAPDHDAELEREVDRIQRTAEKQLAAVAGLNSSLAKKIRKAEAQTATLLSANKELEDKNAHLVEQLQRAHEDVRVLSVEHERADKLHSRVTELNSALVAAELALKKSDANVDSLKAERDIASSELHNTKLKLDAQSHELHQLQQSAENDKAHMDTVVSERTLALDTLTKDKQSVDTENKKLSDQLLERDARLTDADNHLKQEKEEKERLVTDYDKKLADTTQQITVLQANIKDRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHK-------QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSNKEKDHTKAQLESRNLLFVNVDKERNTLKTEKESVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQDMIAAHADEMAEAMLKKDQEFALRNAALRKELDDVVDRHADVQRKEIQRDTA 482
            M Q L   PA  D D +LEREVD IQ+T EKQLA+V GL++SL KK RK+EAQ+A LL+ N  LE KNAHLV QL RA++D+R LS+  +R +   + + + N A+VAAELALKK  AN D++ A                   S +L + +  A+ ++A + + V +R L L  +T ++   D E   L   + +++A L D ++           +  D +K  A+   +I  L A  +  T                      XXXXXXXXXXX    K                                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXX + ++    +A+L+SR   F   + +R  L TEK ++             XXXXXXXXXXXXXXXXXXXXXX         +R  ++  H  EM E + K +QE  L +A LRKELDDVVDRHA ++R E++R+ A
Sbjct:    1 MAQLLPATPAL-DGDPDLEREVDLIQKTTEKQLASVHGLHNSLVKKFRKSEAQSAALLAENHSLEKKNAHLVAQLGRANDDIRHLSIREDRLNDAEASLAQSNKAVVAAELALKKETANRDAVAAXXXXXXXXXXXXXXXXXXVSRDLAENKDLADKERADLKSQVEQRNLNLAAVTVERDERDKEKLALETAVADKEAELADLNHRAAA-------VTADLEKTKAEAEAEIAALTATREKLTSEKDVVDRDFAALQTDRDAVVHXXXXXXXXXXXVTAAKLALQTKADDAEKGLAETRESLAILEKEHQQVTAQLEEKAAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAQDVADMQAELDSRTAAF---ESDRALLVTEKTTLEKDFSETRDRSLAXXXXXXXXXXXXXXXXXXXXXXKQNVDTLIAERDALVVEHRREMTEQLAKTEQEIELSHAELRKELDDVVDRHAALRRAEMEREAA 478          
The following BLAST results are available for this feature:
BLAST of Ggra5848.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IDD09.640e-6447.91Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QQC01.940e-2639.06Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 794..814
NoneNo IPR availableCOILSCoilCoilcoord: 173..193
NoneNo IPR availableCOILSCoilCoilcoord: 47..81
NoneNo IPR availableCOILSCoilCoilcoord: 455..475
NoneNo IPR availableCOILSCoilCoilcoord: 106..154
NoneNo IPR availableCOILSCoilCoilcoord: 373..442
NoneNo IPR availableCOILSCoilCoilcoord: 559..579
NoneNo IPR availableCOILSCoilCoilcoord: 201..344
NoneNo IPR availableCOILSCoilCoilcoord: 15..35
NoneNo IPR availableGENE3D1.10.287.1490coord: 224..365
e-value: 2.5E-10
score: 41.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 602..626
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 715..809
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 484..536
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 762..809
NoneNo IPR availableSUPERFAMILY90257Myosin rod fragmentscoord: 207..306

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000068_piloncontigtig00000068_pilon:127811..130489 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5848.t1Ggra5848.t1Gracilaria gracilis GNS1m malemRNAtig00000068_pilon 127811..130489 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5848.t1 ID=Ggra5848.t1|Name=Ggra5848.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=893bp
MTQELAGAPAAPDHDAELEREVDRIQRTAEKQLAAVAGLNSSLAKKIRKA
EAQTATLLSANKELEDKNAHLVEQLQRAHEDVRVLSVEHERADKLHSRVT
ELNSALVAAELALKKSDANVDSLKAERDIASSELHNTKLKLDAQSHELHQ
LQQSAENDKAHMDTVVSERTLALDTLTKDKQSVDTENKKLSDQLLERDAR
LTDADNHLKQEKEEKERLVTDYDKKLADTTQQITVLQANIKDRTDKLASL
ESELNTAVERSKQLEQQIANLQEHTAELEQHKQQADTQIEKLEKHVDTLE
TEKSDMNHQIENTTAELATLQSQIASLSDENTSLTEQRSVLQTQVEDSNK
EKDHTKAQLESRNLLFVNVDKERNTLKTEKESVDKEIVTLKEKSAGLEND
NAELLKRIAELEHTQQRLASTIEQLEKQRQDMIAAHADEMAEAMLKKDQE
FALRNAALRKELDDVVDRHADVQRKEIQRDTALVEGTLEEFPATPTPTPV
GERSSTQDATKDEIADMGSGNVVMEQDETDATAADSTAPAAAAATIAAAA
ATAATATAVTSGEEEVQEVGDQVEKVQEEGGTEEVPTVVERAAQLEVPTE
MPAEPTTPVPDEVEEVVQEADDAVSPEGVAVMTREVVEEEVQEQEVVAEK
VADPEEGDTNVVTEEVIEEVVVDDRAADVVADDVLEHVEEEELLDDATAA
EKREKALGVKAAVEEASGNGAEGDKTVVEDAKDAVEGAAANGAQVASGAK
DAVVDGGETAKGSAKKGAEKAKEGAKKVGEKAKEGAEKAKEGAKEGAEKA
KEGAKEGAEKAKEVATAVKDKVVDTADKGKDAVRGVAAGATTTVKDKAGA
LKSAVASKTDDAQGTKKKTNGKWNKLLCCFAPSSEDGARAAS*
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