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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra5848.t1.start1 | Ggra5848.t1.start1 | Gracilaria gracilis GNS1m male | start_codon | tig00000068_pilon 127811..127813 + |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Ggra5848.t1.stop1 | Ggra5848.t1.stop1 | Gracilaria gracilis GNS1m male | stop_codon | tig00000068_pilon 130487..130489 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ggra5848.t1 ID=Ggra5848.t1|Name=Ggra5848.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=893bp MTQELAGAPAAPDHDAELEREVDRIQRTAEKQLAAVAGLNSSLAKKIRKA EAQTATLLSANKELEDKNAHLVEQLQRAHEDVRVLSVEHERADKLHSRVT ELNSALVAAELALKKSDANVDSLKAERDIASSELHNTKLKLDAQSHELHQ LQQSAENDKAHMDTVVSERTLALDTLTKDKQSVDTENKKLSDQLLERDAR LTDADNHLKQEKEEKERLVTDYDKKLADTTQQITVLQANIKDRTDKLASL ESELNTAVERSKQLEQQIANLQEHTAELEQHKQQADTQIEKLEKHVDTLE TEKSDMNHQIENTTAELATLQSQIASLSDENTSLTEQRSVLQTQVEDSNK EKDHTKAQLESRNLLFVNVDKERNTLKTEKESVDKEIVTLKEKSAGLEND NAELLKRIAELEHTQQRLASTIEQLEKQRQDMIAAHADEMAEAMLKKDQE FALRNAALRKELDDVVDRHADVQRKEIQRDTALVEGTLEEFPATPTPTPV GERSSTQDATKDEIADMGSGNVVMEQDETDATAADSTAPAAAAATIAAAA ATAATATAVTSGEEEVQEVGDQVEKVQEEGGTEEVPTVVERAAQLEVPTE MPAEPTTPVPDEVEEVVQEADDAVSPEGVAVMTREVVEEEVQEQEVVAEK VADPEEGDTNVVTEEVIEEVVVDDRAADVVADDVLEHVEEEELLDDATAA EKREKALGVKAAVEEASGNGAEGDKTVVEDAKDAVEGAAANGAQVASGAK DAVVDGGETAKGSAKKGAEKAKEGAKKVGEKAKEGAEKAKEGAKEGAEKA KEGAKEGAEKAKEVATAVKDKVVDTADKGKDAVRGVAAGATTTVKDKAGA LKSAVASKTDDAQGTKKKTNGKWNKLLCCFAPSSEDGARAAS* back to topspliced messenger RNA >Ggra5848.t1 ID=Ggra5848.t1|Name=Ggra5848.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2679bp|location=Sequence derived from alignment at tig00000068_pilon:127811..130489+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.
ATGACGCAGGAGCTTGCCGGCGCGCCCGCGGCCCCGGACCACGACGCCGA GCTGGAGCGCGAGGTCGACCGCATCCAACGCACCGCCGAGAAGCAGCTGG CCGCCGTCGCCGGCCTCAACTCCTCGCTCGCCAAGAAGATCCGCAAGGCC GAGGCCCAGACCGCCACCCTGCTGTCGGCCAACAAGGAGCTGGAGGACAA GAACGCCCACCTCGTCGAACAGCTGCAGCGCGCCCACGAGGATGTGCGCG TGCTCTCCGTCGAGCACGAGCGTGCCGACAAGTTGCACTCCCGCGTCACA GAGCTCAACTCCGCCCTGGTCGCCGCCGAGCTCGCCTTGAAGAAGAGCGA CGCCAACGTCGACTCGCTCAAGGCCGAGAGGGATATCGCCTCCAGTGAGT TGCATAACACCAAGCTCAAGCTTGATGCCCAGAGCCATGAGTTGCACCAG CTTCAGCAGAGCGCCGAGAACGACAAGGCTCACATGGACACCGTCGTCAG TGAGCGCACCCTCGCCCTGGATACCCTCACAAAGGACAAGCAATCCGTCG ACACCGAGAACAAGAAATTGTCCGATCAGCTGCTGGAGCGAGACGCTCGC CTCACCGACGCCGACAACCACCTCAAGCAGGAGAAGGAGGAAAAGGAACG TCTTGTCACCGACTATGACAAAAAGCTCGCCGATACCACACAACAAATCA CCGTGCTTCAAGCTAACATTAAGGACCGTACCGACAAACTCGCCTCTCTA GAGTCCGAATTGAACACCGCCGTCGAGCGTTCCAAGCAGCTTGAGCAGCA GATTGCAAACCTTCAGGAGCATACCGCCGAGCTTGAGCAGCACAAGCAAC AAGCCGACACCCAAATCGAAAAGCTCGAGAAACATGTAGATACCTTGGAG ACCGAGAAGAGCGACATGAACCACCAGATTGAGAACACCACTGCCGAACT TGCTACCTTGCAATCACAAATTGCCTCGCTGTCGGACGAGAACACCTCGC TTACCGAGCAACGCTCGGTGCTACAGACCCAGGTCGAAGATTCCAACAAG GAGAAGGATCACACAAAGGCCCAACTTGAGTCGCGCAACCTTCTCTTTGT CAACGTGGACAAGGAGCGTAACACGCTCAAGACTGAAAAGGAGTCTGTTG ACAAGGAGATTGTCACCCTCAAGGAAAAGTCCGCCGGCCTGGAGAATGAC AATGCTGAGCTGCTCAAACGCATTGCGGAGCTGGAGCACACTCAACAACG TCTTGCCTCCACCATTGAGCAACTCGAGAAGCAGAGGCAGGATATGATCG CCGCCCATGCGGACGAAATGGCAGAGGCCATGTTGAAGAAGGACCAGGAG TTTGCTCTTCGTAATGCCGCGCTGAGGAAGGAGCTTGATGATGTAGTCGA TCGTCATGCCGATGTGCAGCGCAAGGAAATTCAGCGTGATACCGCTCTGG TCGAGGGAACACTTGAGGAATTCCCGGCCACCCCGACCCCGACACCGGTT GGAGAGCGCTCATCTACGCAGGATGCCACCAAGGACGAGATTGCTGACAT GGGGTCGGGCAATGTTGTTATGGAGCAggacgagactgatgctactgccg ctgattctaccgcccccgccgctgctgctgctactattgccgccgccgcc gccacggctgcgacggccactgcggtcaccTCTGGAGAAGAAGAGGTGCA GGAGGTTGGGGATCAAGTGGAAAAGGTACAGGAAGAAGGAGGAACTGAAG AGGTGCCTACTGTTGTGGAGAGGGCTGCCCAGTTGGAAGTACCTACTGAA ATGCCTGCCGAACCAACCACCCCTGTACCGGACGAGGTCGAAGAGGTTGT CCAAGAGGCTGACGATGCTGTATCTCCCGAGGGTGTGGCCGTCATGACAC GCGAGGTCGTGGAAGAGGAAGTACAAGAGCAGGAGGTCGTAGCCGAAAAG GTGGCTGACCCCGAGGAAGGTGACACCAATGTCGTAACCGAAGAGGTTAT CGAAGAAGTTGTGGTCGACGACCGAGCGGCAGATGTGGTTGCCGATGATG TCCTTGAGCATGTGGAGGAAGAGGAACTTTTGGATGATGCTACTGCCGCT GAGAAGCGTGAGAAGGCGCTTGGTGTCAAGGCTGCAGTCGAAGAAGCTAG TGGAAATGGCGCTGAAGGCGACAAGACCGTCGTGGAGGATGCAAAGGATG CAGTTGAAGGTGCGGCTGCCAACGGCGCTCAAGTTGCTTCTGGCGCAAAG GACGCTGTCGTTGATGGTGGAGAAACCGCAAAGGGAAGCGCGAAGAAGGG CGCTGAGAAAGCAAAGGAAGGCGCCAAGAAAGTCGGGGAGAAAGCAAAGG AGGGTGCTGAGAAAGCAAAGGAAGGCGCCAAAGAGGGCGCTGAGAAGGCA AAGGAAGGCGCCAAGGAGGGCGCGGAGAAAGCAAAGGAAGTCGCAACAGC CGTGAAGGATAAAGTTGTTGATACGGCTGATAAGGGCAAGGACGCTGTGA GGGGTGTTGCTGCTGGTGCAACGACCACTGTGAAAGACAAAGCTGGAGCC CTGAAATCGGCAGTTGCTTCGAAGACCGATGATGCTCAGGGTACAAAGAA GAAGACAAATGGCAAGTGGAACAAGCTGTTGTGCTGCTTCGCCCCTTCAT CAGAGGATGGCGCCCGTGCTGCCTCTTGA back to topprotein sequence of Ggra5848.t1 >Ggra5848.t1 ID=Ggra5848.t1|Name=Ggra5848.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=893bp
MTQELAGAPAAPDHDAELEREVDRIQRTAEKQLAAVAGLNSSLAKKIRKA EAQTATLLSANKELEDKNAHLVEQLQRAHEDVRVLSVEHERADKLHSRVT ELNSALVAAELALKKSDANVDSLKAERDIASSELHNTKLKLDAQSHELHQ LQQSAENDKAHMDTVVSERTLALDTLTKDKQSVDTENKKLSDQLLERDAR LTDADNHLKQEKEEKERLVTDYDKKLADTTQQITVLQANIKDRTDKLASL ESELNTAVERSKQLEQQIANLQEHTAELEQHKQQADTQIEKLEKHVDTLE TEKSDMNHQIENTTAELATLQSQIASLSDENTSLTEQRSVLQTQVEDSNK EKDHTKAQLESRNLLFVNVDKERNTLKTEKESVDKEIVTLKEKSAGLEND NAELLKRIAELEHTQQRLASTIEQLEKQRQDMIAAHADEMAEAMLKKDQE FALRNAALRKELDDVVDRHADVQRKEIQRDTALVEGTLEEFPATPTPTPV GERSSTQDATKDEIADMGSGNVVMEQDETDATAADSTAPAAAAATIAAAA ATAATATAVTSGEEEVQEVGDQVEKVQEEGGTEEVPTVVERAAQLEVPTE MPAEPTTPVPDEVEEVVQEADDAVSPEGVAVMTREVVEEEVQEQEVVAEK VADPEEGDTNVVTEEVIEEVVVDDRAADVVADDVLEHVEEEELLDDATAA EKREKALGVKAAVEEASGNGAEGDKTVVEDAKDAVEGAAANGAQVASGAK DAVVDGGETAKGSAKKGAEKAKEGAKKVGEKAKEGAEKAKEGAKEGAEKA KEGAKEGAEKAKEVATAVKDKVVDTADKGKDAVRGVAAGATTTVKDKAGA LKSAVASKTDDAQGTKKKTNGKWNKLLCCFAPSSEDGARAAS* back to topmRNA from alignment at tig00000068_pilon:127811..130489+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Ggra5848.t1 ID=Ggra5848.t1|Name=Ggra5848.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=2679bp|location=Sequence derived from alignment at tig00000068_pilon:127811..130489+ (Gracilaria gracilis GNS1m male) ATGACGCAGGAGCTTGCCGGCGCGCCCGCGGCCCCGGACCACGACGCCGA
GCTGGAGCGCGAGGTCGACCGCATCCAACGCACCGCCGAGAAGCAGCTGG
CCGCCGTCGCCGGCCTCAACTCCTCGCTCGCCAAGAAGATCCGCAAGGCC
GAGGCCCAGACCGCCACCCTGCTGTCGGCCAACAAGGAGCTGGAGGACAA
GAACGCCCACCTCGTCGAACAGCTGCAGCGCGCCCACGAGGATGTGCGCG
TGCTCTCCGTCGAGCACGAGCGTGCCGACAAGTTGCACTCCCGCGTCACA
GAGCTCAACTCCGCCCTGGTCGCCGCCGAGCTCGCCTTGAAGAAGAGCGA
CGCCAACGTCGACTCGCTCAAGGCCGAGAGGGATATCGCCTCCAGTGAGT
TGCATAACACCAAGCTCAAGCTTGATGCCCAGAGCCATGAGTTGCACCAG
CTTCAGCAGAGCGCCGAGAACGACAAGGCTCACATGGACACCGTCGTCAG
TGAGCGCACCCTCGCCCTGGATACCCTCACAAAGGACAAGCAATCCGTCG
ACACCGAGAACAAGAAATTGTCCGATCAGCTGCTGGAGCGAGACGCTCGC
CTCACCGACGCCGACAACCACCTCAAGCAGGAGAAGGAGGAAAAGGAACG
TCTTGTCACCGACTATGACAAAAAGCTCGCCGATACCACACAACAAATCA
CCGTGCTTCAAGCTAACATTAAGGACCGTACCGACAAACTCGCCTCTCTA
GAGTCCGAATTGAACACCGCCGTCGAGCGTTCCAAGCAGCTTGAGCAGCA
GATTGCAAACCTTCAGGAGCATACCGCCGAGCTTGAGCAGCACAAGCAAC
AAGCCGACACCCAAATCGAAAAGCTCGAGAAACATGTAGATACCTTGGAG
ACCGAGAAGAGCGACATGAACCACCAGATTGAGAACACCACTGCCGAACT
TGCTACCTTGCAATCACAAATTGCCTCGCTGTCGGACGAGAACACCTCGC
TTACCGAGCAACGCTCGGTGCTACAGACCCAGGTCGAAGATTCCAACAAG
GAGAAGGATCACACAAAGGCCCAACTTGAGTCGCGCAACCTTCTCTTTGT
CAACGTGGACAAGGAGCGTAACACGCTCAAGACTGAAAAGGAGTCTGTTG
ACAAGGAGATTGTCACCCTCAAGGAAAAGTCCGCCGGCCTGGAGAATGAC
AATGCTGAGCTGCTCAAACGCATTGCGGAGCTGGAGCACACTCAACAACG
TCTTGCCTCCACCATTGAGCAACTCGAGAAGCAGAGGCAGGATATGATCG
CCGCCCATGCGGACGAAATGGCAGAGGCCATGTTGAAGAAGGACCAGGAG
TTTGCTCTTCGTAATGCCGCGCTGAGGAAGGAGCTTGATGATGTAGTCGA
TCGTCATGCCGATGTGCAGCGCAAGGAAATTCAGCGTGATACCGCTCTGG
TCGAGGGAACACTTGAGGAATTCCCGGCCACCCCGACCCCGACACCGGTT
GGAGAGCGCTCATCTACGCAGGATGCCACCAAGGACGAGATTGCTGACAT
GGGGTCGGGCAATGTTGTTATGGAGCAggacgagactgatgctactgccg
ctgattctaccgcccccgccgctgctgctgctactattgccgccgccgcc
gccacggctgcgacggccactgcggtcaccTCTGGAGAAGAAGAGGTGCA
GGAGGTTGGGGATCAAGTGGAAAAGGTACAGGAAGAAGGAGGAACTGAAG
AGGTGCCTACTGTTGTGGAGAGGGCTGCCCAGTTGGAAGTACCTACTGAA
ATGCCTGCCGAACCAACCACCCCTGTACCGGACGAGGTCGAAGAGGTTGT
CCAAGAGGCTGACGATGCTGTATCTCCCGAGGGTGTGGCCGTCATGACAC
GCGAGGTCGTGGAAGAGGAAGTACAAGAGCAGGAGGTCGTAGCCGAAAAG
GTGGCTGACCCCGAGGAAGGTGACACCAATGTCGTAACCGAAGAGGTTAT
CGAAGAAGTTGTGGTCGACGACCGAGCGGCAGATGTGGTTGCCGATGATG
TCCTTGAGCATGTGGAGGAAGAGGAACTTTTGGATGATGCTACTGCCGCT
GAGAAGCGTGAGAAGGCGCTTGGTGTCAAGGCTGCAGTCGAAGAAGCTAG
TGGAAATGGCGCTGAAGGCGACAAGACCGTCGTGGAGGATGCAAAGGATG
CAGTTGAAGGTGCGGCTGCCAACGGCGCTCAAGTTGCTTCTGGCGCAAAG
GACGCTGTCGTTGATGGTGGAGAAACCGCAAAGGGAAGCGCGAAGAAGGG
CGCTGAGAAAGCAAAGGAAGGCGCCAAGAAAGTCGGGGAGAAAGCAAAGG
AGGGTGCTGAGAAAGCAAAGGAAGGCGCCAAAGAGGGCGCTGAGAAGGCA
AAGGAAGGCGCCAAGGAGGGCGCGGAGAAAGCAAAGGAAGTCGCAACAGC
CGTGAAGGATAAAGTTGTTGATACGGCTGATAAGGGCAAGGACGCTGTGA
GGGGTGTTGCTGCTGGTGCAACGACCACTGTGAAAGACAAAGCTGGAGCC
CTGAAATCGGCAGTTGCTTCGAAGACCGATGATGCTCAGGGTACAAAGAA
GAAGACAAATGGCAAGTGGAACAAGCTGTTGTGCTGCTTCGCCCCTTCAT
CAGAGGATGGCGCCCGTGCTGCCTCTTGA back to topCoding sequence (CDS) from alignment at tig00000068_pilon:127811..130489+ >Ggra5848.t1 ID=Ggra5848.t1|Name=Ggra5848.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=2679bp|location=Sequence derived from alignment at tig00000068_pilon:127811..130489+ (Gracilaria gracilis GNS1m male) ATGACGCAGGAGCTTGCCGGCGCGCCCGCGGCCCCGGACCACGACGCCGA GCTGGAGCGCGAGGTCGACCGCATCCAACGCACCGCCGAGAAGCAGCTGG CCGCCGTCGCCGGCCTCAACTCCTCGCTCGCCAAGAAGATCCGCAAGGCC GAGGCCCAGACCGCCACCCTGCTGTCGGCCAACAAGGAGCTGGAGGACAA GAACGCCCACCTCGTCGAACAGCTGCAGCGCGCCCACGAGGATGTGCGCG TGCTCTCCGTCGAGCACGAGCGTGCCGACAAGTTGCACTCCCGCGTCACA GAGCTCAACTCCGCCCTGGTCGCCGCCGAGCTCGCCTTGAAGAAGAGCGA CGCCAACGTCGACTCGCTCAAGGCCGAGAGGGATATCGCCTCCAGTGAGT TGCATAACACCAAGCTCAAGCTTGATGCCCAGAGCCATGAGTTGCACCAG CTTCAGCAGAGCGCCGAGAACGACAAGGCTCACATGGACACCGTCGTCAG TGAGCGCACCCTCGCCCTGGATACCCTCACAAAGGACAAGCAATCCGTCG ACACCGAGAACAAGAAATTGTCCGATCAGCTGCTGGAGCGAGACGCTCGC CTCACCGACGCCGACAACCACCTCAAGCAGGAGAAGGAGGAAAAGGAACG TCTTGTCACCGACTATGACAAAAAGCTCGCCGATACCACACAACAAATCA CCGTGCTTCAAGCTAACATTAAGGACCGTACCGACAAACTCGCCTCTCTA GAGTCCGAATTGAACACCGCCGTCGAGCGTTCCAAGCAGCTTGAGCAGCA GATTGCAAACCTTCAGGAGCATACCGCCGAGCTTGAGCAGCACAAGCAAC AAGCCGACACCCAAATCGAAAAGCTCGAGAAACATGTAGATACCTTGGAG ACCGAGAAGAGCGACATGAACCACCAGATTGAGAACACCACTGCCGAACT TGCTACCTTGCAATCACAAATTGCCTCGCTGTCGGACGAGAACACCTCGC TTACCGAGCAACGCTCGGTGCTACAGACCCAGGTCGAAGATTCCAACAAG GAGAAGGATCACACAAAGGCCCAACTTGAGTCGCGCAACCTTCTCTTTGT CAACGTGGACAAGGAGCGTAACACGCTCAAGACTGAAAAGGAGTCTGTTG ACAAGGAGATTGTCACCCTCAAGGAAAAGTCCGCCGGCCTGGAGAATGAC AATGCTGAGCTGCTCAAACGCATTGCGGAGCTGGAGCACACTCAACAACG TCTTGCCTCCACCATTGAGCAACTCGAGAAGCAGAGGCAGGATATGATCG CCGCCCATGCGGACGAAATGGCAGAGGCCATGTTGAAGAAGGACCAGGAG TTTGCTCTTCGTAATGCCGCGCTGAGGAAGGAGCTTGATGATGTAGTCGA TCGTCATGCCGATGTGCAGCGCAAGGAAATTCAGCGTGATACCGCTCTGG TCGAGGGAACACTTGAGGAATTCCCGGCCACCCCGACCCCGACACCGGTT GGAGAGCGCTCATCTACGCAGGATGCCACCAAGGACGAGATTGCTGACAT GGGGTCGGGCAATGTTGTTATGGAGCAggacgagactgatgctactgccg ctgattctaccgcccccgccgctgctgctgctactattgccgccgccgcc gccacggctgcgacggccactgcggtcaccTCTGGAGAAGAAGAGGTGCA GGAGGTTGGGGATCAAGTGGAAAAGGTACAGGAAGAAGGAGGAACTGAAG AGGTGCCTACTGTTGTGGAGAGGGCTGCCCAGTTGGAAGTACCTACTGAA ATGCCTGCCGAACCAACCACCCCTGTACCGGACGAGGTCGAAGAGGTTGT CCAAGAGGCTGACGATGCTGTATCTCCCGAGGGTGTGGCCGTCATGACAC GCGAGGTCGTGGAAGAGGAAGTACAAGAGCAGGAGGTCGTAGCCGAAAAG GTGGCTGACCCCGAGGAAGGTGACACCAATGTCGTAACCGAAGAGGTTAT CGAAGAAGTTGTGGTCGACGACCGAGCGGCAGATGTGGTTGCCGATGATG TCCTTGAGCATGTGGAGGAAGAGGAACTTTTGGATGATGCTACTGCCGCT GAGAAGCGTGAGAAGGCGCTTGGTGTCAAGGCTGCAGTCGAAGAAGCTAG TGGAAATGGCGCTGAAGGCGACAAGACCGTCGTGGAGGATGCAAAGGATG CAGTTGAAGGTGCGGCTGCCAACGGCGCTCAAGTTGCTTCTGGCGCAAAG GACGCTGTCGTTGATGGTGGAGAAACCGCAAAGGGAAGCGCGAAGAAGGG CGCTGAGAAAGCAAAGGAAGGCGCCAAGAAAGTCGGGGAGAAAGCAAAGG AGGGTGCTGAGAAAGCAAAGGAAGGCGCCAAAGAGGGCGCTGAGAAGGCA AAGGAAGGCGCCAAGGAGGGCGCGGAGAAAGCAAAGGAAGTCGCAACAGC CGTGAAGGATAAAGTTGTTGATACGGCTGATAAGGGCAAGGACGCTGTGA GGGGTGTTGCTGCTGGTGCAACGACCACTGTGAAAGACAAAGCTGGAGCC CTGAAATCGGCAGTTGCTTCGAAGACCGATGATGCTCAGGGTACAAAGAA GAAGACAAATGGCAAGTGGAACAAGCTGTTGTGCTGCTTCGCCCCTTCAT CAGAGGATGGCGCCCGTGCTGCCTCTTGA back to top
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