Ggra5836.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5836.t1
Unique NameGgra5836.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length426
Homology
BLAST of Ggra5836.t1 vs. uniprot
Match: R7QKF5 (Uncharacterized protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QKF5_CHOCR)

HSP 1 Score: 285 bits (728), Expect = 3.340e-82
Identity = 169/425 (39.76%), Postives = 246/425 (57.88%), Query Frame = 0
Query:   24 TVEIESLHAPSVSQRN---KTNVSEACNAFEAANSATEDIWAALFCDPAEYMNDI--LEEEVKEID-HVGENENAENNMTTAERSNAHKIGGLQGWNYANAFEEVKLQLDNADSILGIRFRKEGNTVIKNVVKEIRVNDNN--PQFFDESNISS---------------LDMFDVFFPASLLEKLRAYINRVLCARKEKATTAMELKGVIVTHVLAASYGTTVSVMTSPENREFCYQTGLSGKRYSEIWAALSGTRKRRQPVEDCDSGWFNKPILGNQFITELEHKLSAINRVYLHVVGQTVFSLDDDHQRLRSRAVKELTNLSHVNNLQKALGRVNNALCSGLISGFIASHYSRPGEKLIHVWKRLVQLLQGAATPDSRKPMEKAIFAADRGYNGKQTVDFITDKLGASGIGTPKRSLDYPFVF 425
            T E+E+   P+  Q+    ++ +S   N    A +  ED+W+ +F D  E    +  L      +D H+   +  E+ +   ER+  H+ GGLQ W Y + F EV++ +D  DS+L +RF  E N+++ NV++E+   ++    +  D   +SS               L +   F P SLLEKL+A  NR L +R +K TT  EL G++V HVL ASY    SV+   +  +F +  GLS  RY ++W+AL+G R++R  V+   +GW          IT++E +++A+NR  L++ G TV SLDDDH R+ SRAV  L+ L   NN +K LG V N L S L S F A H++R GEKL+H W+RL  LLQGA+T  + KPM  AIFAADRGYN K+T++F++  LGAS +GT KR + YPFVF
Sbjct:   83 TGEVEATVTPAELQQLQPLRSFISNNANINSDAGALCEDLWSGIFHDYDEERCALGALHAPTSTVDAHMSGGDITEDLLE--ERAVNHQEGGLQDWTYESPFAEVEVIVDEVDSVLEVRFITEANSILDNVLEEVNSRESACPHETMDSMTVSSRNDCSTPRQVKPLSRLSVLRTFIPDSLLEKLKAVANRALHSRGQKLTTVQELLGLLVLHVLCASYNEGPSVVCGAKMSDFFFHMGLSAARYRQVWSALTGCREKRTAVDYSTTGWCRTASRTTSLITDIESEVAAVNRELLYIPGATVLSLDDDHLRMASRAVSSLSFLQQHNNPKKGLGPVGNTLGSALTSVFFACHFTRRGEKLLHTWERLAPLLQGASTTGALKPMADAIFAADRGYNTKETLNFVSKTLGASLLGTHKRDMTYPFVF 505          
BLAST of Ggra5836.t1 vs. uniprot
Match: R7QLD7 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLD7_CHOCR)

HSP 1 Score: 207 bits (527), Expect = 7.370e-62
Identity = 96/176 (54.55%), Postives = 127/176 (72.16%), Query Frame = 0
Query:  230 ENREFCYQTGLSGKRYSEIWAALSGTRKRRQPVEDCDSGWFNKPILGNQFITELEHKLSAINRVYLHVVGQTVFSLDDDHQRLRSRAVKELTNLSHVNNLQKALGRVNNALCSGLISGFIASHYSRPGEKLIHVWKRLVQLLQGAATPDSRKPMEKAIFAADRGYNGKQTVDFITD 405
            + + F ++  +SG RY E+W+ALSGT+++R+  E  + GW NKP+ GN  IT +E +L+AINR  +HV G T++S+DDDH RL SRAV  LTNLS V N +KALG VNNA CS L   FIASHYSRP EK+ HVW RLVQL+QG  T  + +PM  +IFA+DRGYN  +T+ F+ +
Sbjct:   12 KTKHFSFRCKISGSRYKEVWSALSGTKRKREGFEQSECGWLNKPVAGNALITYMEGELAAINRRLVHVEGVTIYSVDDDHNRLSSRAVLHLTNLSQVTNPKKALGPVNNAACSALTHAFIASHYSRPHEKITHVWHRLVQLIQGVPTVGALRPMVDSIFASDRGYNEVETISFLNE 187          
BLAST of Ggra5836.t1 vs. uniprot
Match: A0A2V3IV24 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV24_9FLOR)

HSP 1 Score: 156 bits (395), Expect = 2.690e-43
Identity = 76/111 (68.47%), Postives = 90/111 (81.08%), Query Frame = 0
Query:  170 LDMFDVFFPASLLEKLRAYINRVLCARKEKATTAMELKGVIVTHVLAASYGTTVSVMTSPENREFCYQTGLSGKRYSEIWAALSGTRKRRQPVE---DCDSGWFNKPILGN 277
            +++FDVFFP SLL KLR+Y+NRVL ARKEK TT ME KG+IV HVLAASYGTTVSVMT  E+ EF YQTG+ GKRY+EIWAAL GT+KR Q  E   + + GWFNKP++GN
Sbjct:    1 MNVFDVFFPTSLLGKLRSYVNRVLSARKEKPTTVMEFKGIIVNHVLAASYGTTVSVMTYTESEEFYYQTGILGKRYAEIWAALRGTKKRPQRAEVYGNSEKGWFNKPVVGN 111          
BLAST of Ggra5836.t1 vs. uniprot
Match: R7Q9D7 (EF-hand domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9D7_CHOCR)

HSP 1 Score: 97.4 bits (241), Expect = 5.370e-18
Identity = 47/69 (68.12%), Postives = 55/69 (79.71%), Query Frame = 0
Query:  357 GEKLIHVWKRLVQLLQGAATPDSRKPMEKAIFAADRGYNGKQTVDFITDKLGASGIGTPKRSLDYPFVF 425
            GEKLIH W+RLVQLLQG +T  S +PM  AIFAADRGYN K T++FI+D LGAS +GT KR L +PFVF
Sbjct:  424 GEKLIHTWERLVQLLQGVSTTGSLRPMPGAIFAADRGYNSKVTIEFISDVLGASLLGTHKRDLWFPFVF 492          
The following BLAST results are available for this feature:
BLAST of Ggra5836.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
R7QKF53.340e-8239.76Uncharacterized protein n=2 Tax=Chondrus crispus T... [more]
R7QLD77.370e-6254.55Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IV242.690e-4368.47Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q9D75.370e-1868.12EF-hand domain-containing protein n=1 Tax=Chondrus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000068_piloncontigtig00000068_pilon:69461..70738 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5836.t1Ggra5836.t1Gracilaria gracilis GNS1m malemRNAtig00000068_pilon 69461..70738 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5836.t1 ID=Ggra5836.t1|Name=Ggra5836.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=426bp
MQSTEPEIYSEDSSLISEAMQVDTVEIESLHAPSVSQRNKTNVSEACNAF
EAANSATEDIWAALFCDPAEYMNDILEEEVKEIDHVGENENAENNMTTAE
RSNAHKIGGLQGWNYANAFEEVKLQLDNADSILGIRFRKEGNTVIKNVVK
EIRVNDNNPQFFDESNISSLDMFDVFFPASLLEKLRAYINRVLCARKEKA
TTAMELKGVIVTHVLAASYGTTVSVMTSPENREFCYQTGLSGKRYSEIWA
ALSGTRKRRQPVEDCDSGWFNKPILGNQFITELEHKLSAINRVYLHVVGQ
TVFSLDDDHQRLRSRAVKELTNLSHVNNLQKALGRVNNALCSGLISGFIA
SHYSRPGEKLIHVWKRLVQLLQGAATPDSRKPMEKAIFAADRGYNGKQTV
DFITDKLGASGIGTPKRSLDYPFVF*
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