Ggra5829.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5829.t1
Unique NameGgra5829.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length460
Homology
BLAST of Ggra5829.t1 vs. uniprot
Match: A0A2V3ISY7 (Ribosome biogenesis protein NOP53 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISY7_9FLOR)

HSP 1 Score: 545 bits (1405), Expect = 4.480e-190
Identity = 296/458 (64.63%), Postives = 354/458 (77.29%), Query Frame = 0
Query:    1 MAKTGTKRKRKERESRVAAEVEQGKRRTATELKLLGTSVTKDVADDSIFTIDRKGVSKEVLDNQFRGQALQQRRAAKRARRQAPKERKSEAGVRTAQDRVENVKFVGKKKKVGVGLVEKQIMGKKKFDKPEGHFGNRSAVVREMLQKKGEKPDIWSASHEMEVEDVETDLFEKKKGVAQRRKVLEEKVHARHRKAQSIIHPDSGLSVNPTHSDHQDTLGEAVASIVQKDDDKRWDEKKMSYDPAILLESTEGEVADTGMKLDENLSDSDSGREADVVAFTQGVPERKTRAQRNKESRKRIMAANIAKKKADAKQAKDIENIVSLTSQAEEEADKLNGITKQRLLEENPPLPPKPDMPVLRRIAGEKVRNEKAGNPVALSTELSESMRNVKMPKANPLVRDRFLSFERRGFIAPPKVFPKEARRMARDKLREERKEXXRRKGRGSASNLTFWRNGKRAV 458
            M KTGTKRKR+ERE+RVA EVE GKR  A E KLLGT+V +  AD  +FTIDRKG SK+ L  +F GQALQQRRAAKRARR APKERKSEA ++TA+   +NV F G+K K  +  VE++I+ K+ FDKPEGH GNRSAVVR  LQ KG+K D+W+ + + + +D  +DL  +K+G+A RR+ LE  +HA HR A  I+HPDSGLS+NPTHSDHQD LGEA+A IV+KDDD+RW+EKKMSYDPAIL ESTEG +AD GMK+D     S+   E +V+   QG P+RKTRAQRNKE+RKR+MA NIAKKKA AKQ KD ENI  +  +AE EADK+NGI K+R+L + P      D PVL ++AG KVR EKA  PV LSTELSESMR VKMP ANPL RDRFLSFERRGFI PPKV PKE RRM+RDKLREERK+  RRKGRG+AS+LTFWR GK+A+
Sbjct:    1 MGKTGTKRKRRERENRVAGEVEDGKRAVAIEKKLLGTAVNEYAADHVLFTIDRKGKSKDALAQKFHGQALQQRRAAKRARRHAPKERKSEAAIKTAETSTDNVLFKGRKNKANIPSVEQRILAKRSFDKPEGHVGNRSAVVRVTLQNKGKKDDLWNTTDDKQEQDG-SDLLSEKQGIANRRRRLEGAIHAVHRSAPHIVHPDSGLSINPTHSDHQDVLGEALAEIVRKDDDRRWNEKKMSYDPAILEESTEGILADIGMKVDNQSEQSEDESEDEVLVMHQGAPDRKTRAQRNKEARKRVMACNIAKKKAAAKQDKDFENIEEIRRKAETEADKINGIAKERMLAKKPSQDHGMDAPVLTKVAGVKVRVEKANIPVTLSTELSESMRKVKMPTANPLARDRFLSFERRGFIVPPKVLPKEIRRMSRDKLREERKDRRRRKGRGAASDLTFWRRGKKAI 457          
BLAST of Ggra5829.t1 vs. uniprot
Match: R7QTR3 (Ribosome biogenesis protein NOP53 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTR3_CHOCR)

HSP 1 Score: 412 bits (1058), Expect = 1.220e-137
Identity = 235/460 (51.09%), Postives = 305/460 (66.30%), Query Frame = 0
Query:    1 MAKTGTKRKRKERESRVAAEVEQGKRRTATELKLLGTSVTKDVADDSIFTIDRKGVSKEVLDNQFRGQALQQRRAAKRARRQAPKERKSEAGVRTAQDRVENVKFVGKKKKVGVGLVEKQIMGKKKFDKPEGHFGNRSAVVREMLQKKGEKPDIWSASHEMEVEDVETDLFEKKKGVAQRRKVLEEKVHARHRKAQSIIHPDSGLSVNPTHSDHQDTLGEAVASIVQKDDDKRWDEKKMSYDPAILLESTEGEVADTGMKLDENL-SDSDSGREADVVAFTQGVPERKTRAQRNKESRKRIMAANIAKKKADAKQAKDIENIVSLTSQAEEEADKLNGITKQRLLEENPPLPPKPDMPVLRRIAGEKVRNEKAGNPVALSTELSESMRNVKMPKANPLVRDRFLSFERRGFIAPPKVFPKEARRMARDKLREERKEXXRRKGRGSASNLTFWRNGKRAVL 459
            M   GTKRKR++R +RVAA +E G+ R A E K LG  ++  V D  +F  DR+G  K  +  +   QA + RRAAKRARR  PK RKSE  +  +          GK+KK G+G+VE +I+ K+KFDKP GH GNRS V+R+    K    D+W+     +V D           ++Q R+ LE KV+  HR A S+IHP  G+S+NPTH DHQD LGEA+A IV+KDDD  W   KM +DPA+L ESTEGEV  TGMK   +   DS+S  + D +  T  VP+RKTR+QR+KE+RKR M +NIAKKKA A++  +++N+  +  +A++ ADKL+G  K R L ENPP   K   P+  ++AG+KVRNE    PV LS ELSESMR VKMP ANPL+RDRF+SFERRG IAPPKV PKE  RM + K ++ERK+  +RKGRGS SN+TFWRNGK+A+L
Sbjct:    1 MVSAGTKRKRRDRGNRVAAAIEDGRIRGARERKTLGKVISASVPDTELFVEDRRGKEKAEVQQELLAQAAEDRRAAKRARRAVPKVRKSEGALGKSVPIASTSDLAGKRKKKGLGIVEVEILAKRKFDKPRGHVGNRSEVIRQQKLHKDGMEDVWNGEMSRKVADE----------ISQNRRRLEGKVNVIHRSAPSVIHPAQGMSINPTHGDHQDKLGEALADIVRKDDDDEWTATKMKFDPALLAESTEGEVLGTGMKAASDAPDDSESSDDEDSIIRT--VPQRKTRSQRHKEARKREMVSNIAKKKASARRVAELQNVDEIAREAKKLADKLSGEEKLRQLRENPPPAKKVHEPIFAKVAGQKVRNETVVEPVTLSAELSESMRRVKMPIANPLLRDRFVSFERRGLIAPPKVLPKEIWRMEQAKRQDERKDKRKRKGRGSRSNMTFWRNGKKAIL 448          
BLAST of Ggra5829.t1 vs. uniprot
Match: A0A7S3EL21 (Ribosome biogenesis protein NOP53 n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EL21_9RHOD)

HSP 1 Score: 82.4 bits (202), Expect = 2.280e-13
Identity = 109/424 (25.71%), Postives = 181/424 (42.69%), Query Frame = 0
Query:    3 KTGTKRKRKERESRVAAEVEQGKRRTATELKLLGTSVTKDVADDSIFTIDRKGVSKEVLDNQFRGQALQQRRAAKRARRQAPKERKSEAGVRTAQDRVENVKFVGKKKKVGVGLVEKQIMGKKKFDKPEGHFGNRSAVVREML--QKKGEKPDIWSASHEMEVEDVETDLFEKKKGVAQRRKVLEEKVHARHRKAQSIIHPDSGLSVNPTHSDHQDTLGEAVASIVQKDDDKRWDEKKMSYDPAILLESTEGEVADTGMKLDENLSDSDSGREADVVAFTQGVPERKTRAQRNKESRKRIMAANIAKKKADAKQAKDIENIVSLTSQAEE----EADKLNGITKQ----------RLLEENPPLPPKPDMPVLRRIAGEKVRNEKAGNPVALSTELSESMRNVKMPKANPLVRDRFLSFERRGF 410
            K GT +KR +R +    ++E        E++ +GT   +   D  +F  D++   KE L  +      + RR  K                  A    +N+K +  +K+       K  + K    + +      +   R+ +   +     D+WS   E         L  KKK +      L++K  A   +A   + P  G S+NP+ SDHQ+ LGEAV+ +V+++ ++ W  +K+            GE       + ++L++    +  D     +  PE+KTR +RN+E R++        +KA  K   D+E I  +  + EE    +ADK+  + K            LL     +       V RRIAG KV + +   P  L+ EL + +R  K+ K N LVRDRF+S +RRGF
Sbjct:    5 KKGTAKKRIKRANAAIEKIEDDALAAEAEVRAVGTKA-EQAKDSELFFTDKQPTGKEELRTKLSRDEKRNRRGRK------------VLWSEVALIPNDNIKAIPSEKQFKAAKPSKDGIPKADQKRVKKSIAKETWTQRKKIGPSQSRNSYDVWSVPEEDADVGNWWKLQVKKKNLP-----LDDKQGASGSQAGDQVAPP-GASINPSFSDHQNLLGEAVSQVVRREHERNWVREKLYV----------GETEHDKATIPQHLAEITPDKAEDGPGSAKTNPEKKTRTERNREMRRKRSEQESELRKAKRKLRGDVERIHEIEKEIEESARPDADKVISLLKMLRPCGAARQLSLLYIFSQVKKMRREVVRRRIAGRKVPDREITVP--LTEELGKDLRRAKV-KGN-LVRDRFVSLQRRGF 395          
BLAST of Ggra5829.t1 vs. uniprot
Match: A0A8H6T276 (Ribosome biogenesis protein NOP53 n=1 Tax=Mycena indigotica TaxID=2126181 RepID=A0A8H6T276_9AGAR)

HSP 1 Score: 67.4 bits (163), Expect = 1.950e-8
Identity = 65/226 (28.76%), Postives = 108/226 (47.79%), Query Frame = 0
Query:  197 SIIHPDSGLSVNPTHSDHQDTLGEAVASIVQKDDDKRWDEKKMSYDPAILLESTEGEVADTGMKLDENLSDSDSGREADVVAFTQGVPERKTRAQRNKESR----KRIMAANIAKKK--ADAKQAKDIENIVSLTSQAEEEADKLNGITKQRLLEENPPLPPKPDMPVLRRIAGEKVRNEKA--GN-PVALSTELSESMRNVKMPKANPLVRDRFLSFERRGFIAP 413
            +I+ P  G S NPT   H + L  AV +  ++  D               +E   G    +GMK+DE ++DS+   E +VV   + +P+RKT+AQRNK +R    KR +   + +K+  A  +  + +    + T  A E+  ++     +  L+++              +AG+K+   +   G   V L  +LSES+R +K P+ N L RDRF S ++R  I P
Sbjct:  212 AIVDPHQGTSYNPTPDAHNELLRAAVEAKFERAKDN-------------FVEDVPG--VPSGMKVDEPVNDSEEDEETEVVP--KSIPQRKTKAQRNKAARLLAEKRALLEKVRRKRELALVQDIRQLRKTANQTKTAREQRQRIREAALKAKLKKD-------------GLAGQKLGKHRVPVGEVDVQLGDDLSESLRGLK-PEGN-LFRDRFTSLQQRALIEP 405          
BLAST of Ggra5829.t1 vs. uniprot
Match: H3HEF4 (Ribosome biogenesis protein NOP53 n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HEF4_PHYRM)

HSP 1 Score: 64.7 bits (156), Expect = 1.080e-7
Identity = 68/220 (30.91%), Postives = 111/220 (50.45%), Query Frame = 0
Query:  203 SGLSVNPTHSDHQDTLGEAVASIVQKDDDKRWDEKKMSYDPAILLESTEGEVADTGMKLDENLSDSDSGR-----EADVVAFTQGVPERKTRAQRNKESRKRIMAANIAKKKADAKQAKDI---ENIVSLTSQAEEEADKLNGITKQRL---LEENPPLPPKPDMPVLRRIAGEKVRNEKAGNPVALSTELSESMRNVKMPKANPLVRDRFLSFERRGFI 411
            +G S +P    HQD + EAVA  +++ D +     K+S   A      EG   DT   + ++ SDS+ G      E      T+ +PE+ TRAQRNK +R ++M      ++ +    K I   ++I+    ++E+++ K   + K +L   L+E P          L R+AG+  + ++   PV+ S EL+ +MR +K PK NPL+ DRF S  +R  I
Sbjct:  146 AGQSYHPDFETHQDVMAEAVAKELERRDKR----SKLSEPVA------EGMSEDTLQYIKQDSSDSEEGSSDSEDEDGTSTKTRKLPEKVTRAQRNKRTRHKMMELEHQTRRGEKSIIKQINASQHILQDIVKSEKQSAKKMELKKLQLEQKLQEEP----------LVRVAGKYTKLDR-DTPVSFSEELTGNMRTLK-PKGNPLL-DRFDSLHKRNKI 342          
BLAST of Ggra5829.t1 vs. uniprot
Match: A0A0C3CC88 (Ribosome biogenesis protein NOP53 n=1 Tax=Hebeloma cylindrosporum h7 TaxID=686832 RepID=A0A0C3CC88_HEBCY)

HSP 1 Score: 63.2 bits (152), Expect = 4.760e-7
Identity = 79/279 (28.32%), Postives = 130/279 (46.59%), Query Frame = 0
Query:  153 DIWSASHEMEVEDVETDLFEKKKG---VAQRRKVLEEKVHARHRKAQSIIHPDSGLSVNPTHSDHQDTLGEAVASIVQK--DDDKRWDEKKMSYDPAILLESTEGEVADTGMKLDENLSDSDSGREADVVAFTQG--VPERKTRAQRNKESR----KRIMAANIAKKK--ADAKQAKDIE--NIVSLTSQAEEEADKLNGITKQRLLEENPPLPPKPDMPVLRRIAGEKVRNEKAGNP---VALSTELSESMRNVKMPKANPLVRDRFLSFERRGFIAP 413
            D W+     E++D   ++ +KK      AQ R ++E           +I+ P  G S NP    HQ+ L +A A  +++  D +K  + K    +  +  E  +  VA  GMK+ E   D +   E D    T    VPERKT+AQRN+ +R    KR +     +K+  A   +AK +   N  ++++Q +E   KL  +  ++L ++               +AG+K+   K       V L  +L+E++R +K P+ N L RDRF S ++R  I P
Sbjct:  185 DAWAPEEVAEIKDGLENVQKKKAKPPVFAQTRDLIE---------IPAIVEPHQGTSYNPPVDAHQELLEKAAALEMKRLRDAEKMAEVKTKMEEAKLTAEEYDMSVA-PGMKVQELHGDEEEQPEEDEEVSTSAKRVPERKTKAQRNRAARLLKEKRALVEKAQRKRLMASINEAKALRKANAQTMSAQEKEREAKLQ-LLAEKLKKQG--------------LAGQKLGKHKVPESNVIVQLGEDLTENLRGLK-PEGN-LFRDRFQSLQQRALIEP 436          
BLAST of Ggra5829.t1 vs. uniprot
Match: A0A8H7DG64 (Ribosome biogenesis protein NOP53 n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H7DG64_9AGAR)

HSP 1 Score: 61.6 bits (148), Expect = 1.470e-6
Identity = 117/446 (26.23%), Postives = 187/446 (41.93%), Query Frame = 0
Query:   20 EVEQGKRRTATELKLLGTSVTKDVADDSIFTIDRKGVSK-----------EVLDNQFRGQALQQRRA--AKRARRQAPKERKSEAGVRTAQDRVENVKFVGKKKKVGVGLVEKQIMGKKKFDKPEGHFGNRSAVVREMLQKKGEKPDIWSASHEMEVEDVETDLFEKKKGVAQRRKVLEEKVHARHR-KAQSIIHPDSGLSVNPTHSDHQDTLGEAVASIVQKDDDK--RWDEKKMSYDPAILLESTEGEVADTGMKLDENLSDSDSGREADVVAFTQGVPERKTRAQRNKES--------------------RKRIMAANIAKKKADAKQAKDIENI---VSLTSQAEEEADKLNGITKQRLLEENPPLPPKPDMPVLRRIAGEKVRNEKAGNP---VALSTELSESMRNVKMPKANPLVRDRFLSFERRGFIAPP-KVFPKEAR 422
            EVE+G      E +  GT + K   DD +F +D KG  K           E++  +     L QR A  A  +R  A K+RKS     +++D+   ++   + +K     +          D  E   G+ +  + E ++  G   D W+ + EME      ++ +  + V  ++  L    H RH  +  +I+ P  G S NP    HQ+ L +A + I  K  +K  +  E K   D A +  + E      GMK+D  + D +     +V+  T+ +PERKT+AQRNK +                    R+  +      KK++     DI  +    + T  A E+A +      Q  L+              R +AG+K+   +       V L  +LSES+R +K P+ N L RDRF S ++R  I P   V PK  R
Sbjct:   44 EVEEGIEELRAEERATGTFLHKQ-QDDQLFVVDVKGDDKIRKHMPKFKASELISTKI----LAQRSAVPAVISRTTASKKRKSPL---SSEDKERLLRISKRPRKGPFNSI---------VDPTEFGAGSATLGLSEAVKSSGAY-DPWAPAEEME------EIKDGLETVQPKKVKLPVHGHPRHTIEVPAILEPHQGTSYNPPADAHQELLLKA-SEIEGKRVEKAAKLAETKAKIDQATVEATEETSGVPPGMKVDLVMEDDEDPASTEVI--TKKMPERKTKAQRNKAAKLLAQVCPVFRPFAFTFDPPRRNALWRTRRAKKSELAVINDIRLLRRTANKTLSAREQAREARRAALQEKLK--------------RGLAGQKLGKHRVPEEQVDVQLGEDLSESLRALK-PEGN-LFRDRFTSLQQRALIEPRVPVLPKRRR 446          
The following BLAST results are available for this feature:
BLAST of Ggra5829.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3ISY74.480e-19064.63Ribosome biogenesis protein NOP53 n=1 Tax=Gracilar... [more]
R7QTR31.220e-13751.09Ribosome biogenesis protein NOP53 n=1 Tax=Chondrus... [more]
A0A7S3EL212.280e-1325.71Ribosome biogenesis protein NOP53 n=2 Tax=Rhodosor... [more]
A0A8H6T2761.950e-828.76Ribosome biogenesis protein NOP53 n=1 Tax=Mycena i... [more]
H3HEF41.080e-730.91Ribosome biogenesis protein NOP53 n=2 Tax=Phytopht... [more]
A0A0C3CC884.760e-728.32Ribosome biogenesis protein NOP53 n=1 Tax=Hebeloma... [more]
A0A8H7DG641.470e-626.23Ribosome biogenesis protein NOP53 n=1 Tax=Mycena s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011687Ribosome biogenesis protein Nop53/GLTSCR2PFAMPF07767Nop53coord: 20..404
e-value: 5.9E-21
score: 75.3
IPR011687Ribosome biogenesis protein Nop53/GLTSCR2PIRSFPIRSF017302Gltscr2coord: 2..449
e-value: 7.1E-10
score: 36.3
IPR011687Ribosome biogenesis protein Nop53/GLTSCR2PANTHERPTHR14211GLIOMA SUPPRESSOR CANDIDATE REGION GENE 2coord: 6..421
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 421..449
NoneNo IPR availablePANTHERPTHR14211:SF7RIBOSOME BIOGENESIS PROTEIN NOP53coord: 6..421

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000935_piloncontigtig00000935_pilon:413386..414765 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5829.t1Ggra5829.t1Gracilaria gracilis GNS1m malemRNAtig00000935_pilon 413386..414765 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5829.t1 ID=Ggra5829.t1|Name=Ggra5829.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=460bp
MAKTGTKRKRKERESRVAAEVEQGKRRTATELKLLGTSVTKDVADDSIFT
IDRKGVSKEVLDNQFRGQALQQRRAAKRARRQAPKERKSEAGVRTAQDRV
ENVKFVGKKKKVGVGLVEKQIMGKKKFDKPEGHFGNRSAVVREMLQKKGE
KPDIWSASHEMEVEDVETDLFEKKKGVAQRRKVLEEKVHARHRKAQSIIH
PDSGLSVNPTHSDHQDTLGEAVASIVQKDDDKRWDEKKMSYDPAILLEST
EGEVADTGMKLDENLSDSDSGREADVVAFTQGVPERKTRAQRNKESRKRI
MAANIAKKKADAKQAKDIENIVSLTSQAEEEADKLNGITKQRLLEENPPL
PPKPDMPVLRRIAGEKVRNEKAGNPVALSTELSESMRNVKMPKANPLVRD
RFLSFERRGFIAPPKVFPKEARRMARDKLREERKERRRRKGRGSASNLTF
WRNGKRAVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011687Nop53/GLTSCR2