Ggra5785.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra5785.t1
Unique NameGgra5785.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length119
Homology
BLAST of Ggra5785.t1 vs. uniprot
Match: A0A2V3IUZ9 (Cryptochrome DASH n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUZ9_9FLOR)

HSP 1 Score: 234 bits (596), Expect = 3.370e-72
Identity = 106/117 (90.60%), Postives = 111/117 (94.87%), Query Frame = 0
Query:    1 MRELALTGFMSNRGRQNVASFLIHDLEFPDWRAGAEYFESILIDHDVASNWGNWAYLAGVGSDPRGGRKFNVIKQSIQYDPNGWFIQRWCPELVDLPPPMIHEPHKLSAEALKGVDI 117
            MRELALTGFMSNRGRQNVASFLIHDLEFPDWRAGAEYFES+LIDHDVASNWGNWAYLAGVGSDPRGGRKFNV+KQS QYDP GWFI RWCPEL+D+PPPMIHEPH LS+EALK V I
Sbjct:  435 MRELALTGFMSNRGRQNVASFLIHDLEFPDWRAGAEYFESVLIDHDVASNWGNWAYLAGVGSDPRGGRKFNVVKQSKQYDPEGWFITRWCPELIDIPPPMIHEPHLLSSEALKEVGI 551          
BLAST of Ggra5785.t1 vs. uniprot
Match: R7QSK1 (Cryptochrome DASH n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSK1_CHOCR)

HSP 1 Score: 199 bits (507), Expect = 1.060e-58
Identity = 92/117 (78.63%), Postives = 101/117 (86.32%), Query Frame = 0
Query:    1 MRELALTGFMSNRGRQNVASFLIHDLEFPDWRAGAEYFESILIDHDVASNWGNWAYLAGVGSDPRGGRKFNVIKQSIQYDPNGWFIQRWCPELVDLPPPMIHEPHKLSAEALKGVDI 117
            MRELA TGFMSNRGRQNVASFLIHDL +PDWRAGAEY ES LIDHDVASNW NWAYLAGVGSDPRGGRKFNV+KQS+QYDP G F+ RW PELVD+P PM HEPH LS   L+ +++
Sbjct:  485 MRELAGTGFMSNRGRQNVASFLIHDLGYPDWRAGAEYLESQLIDHDVASNWANWAYLAGVGSDPRGGRKFNVVKQSMQYDPEGRFLNRWVPELVDIPVPMKHEPHTLSKAELEDLNV 601          
BLAST of Ggra5785.t1 vs. uniprot
Match: A0A3M1J9U4 (Cryptochrome DASH (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M1J9U4_9BACT)

HSP 1 Score: 154 bits (389), Expect = 8.570e-44
Identity = 72/108 (66.67%), Postives = 87/108 (80.56%), Query Frame = 0
Query:    1 MRELALTGFMSNRGRQNVASFLIHDLEFPDWRAGAEYFESILIDHDVASNWGNWAYLAGVGSDPRGGRKFNVIKQSIQYDPNGWFIQRWCPELVDLPPPMIHEPHKLS 108
            MREL LTGFMSNRGRQNVASFL+ DL+  +W+ GAEYFES+LID+DVASNWGNW Y+AGVGSDPR  R FN+IKQ+ +YDP G +++ W PEL +LP   IH P +L 
Sbjct:  191 MRELNLTGFMSNRGRQNVASFLVKDLKV-NWQMGAEYFESLLIDYDVASNWGNWNYVAGVGSDPRENRYFNIIKQAKRYDPQGDYVRLWVPELAELPSAYIHTPDQLQ 297          
BLAST of Ggra5785.t1 vs. uniprot
Match: A0A819YQV6 (Hypothetical protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A819YQV6_9BILA)

HSP 1 Score: 149 bits (375), Expect = 2.130e-43
Identity = 74/119 (62.18%), Postives = 85/119 (71.43%), Query Frame = 0
Query:    1 MRELALTGFMSNRGRQNVASFLIHDLEFPDWRAGAEYFESILIDHDVASNWGNWAYLAGVGSDPRGGRKFNVIKQSIQYDPNGWFIQRWCPELVDLPPPMIHEPHKLSAEALK--GVDI 117
            MRE+  TG+MSNRGRQNVASFL  DL   DWR GA +FESILIDHDV SN+GNW Y+AGVG+DPR  R FNV+KQ   YDPNG F++ WCPEL  LP   I  P    A  LK  GV++
Sbjct:   17 MREIMATGWMSNRGRQNVASFLTKDLSI-DWRYGAVWFESILIDHDVCSNYGNWIYVAGVGTDPRENRHFNVVKQGFDYDPNGIFVRIWCPELARLPNEYIQTPWLAPAHILKEAGVEL 134          
BLAST of Ggra5785.t1 vs. uniprot
Match: DASH family cryptochrome n=1 Tax=Lewinella cohaerens TaxID=70995 RepID=UPI00036F1915 (DASH family cryptochrome n=1 Tax=Lewinella cohaerens TaxID=70995 RepID=UPI00036F1915)

HSP 1 Score: 155 bits (391), Expect = 9.210e-43
Identity = 71/108 (65.74%), Postives = 87/108 (80.56%), Query Frame = 0
Query:    1 MRELALTGFMSNRGRQNVASFLIHDLEFPDWRAGAEYFESILIDHDVASNWGNWAYLAGVGSDPRGGRKFNVIKQSIQYDPNGWFIQRWCPELVDLPPPMIHEPHKLS 108
            MREL LTGFMSNRGRQNVASFL+ DL F +W+ GAEYFES+LID+DV SNWGNW Y+AGVGSDPR  R FN++KQ+ +YDP G +++ W PEL +LP  M+H P +L 
Sbjct:  346 MRELNLTGFMSNRGRQNVASFLVKDL-FVNWQMGAEYFESMLIDYDVTSNWGNWNYIAGVGSDPREDRYFNIVKQARRYDPKGDYVKLWVPELAELPADMVHIPDQLK 452          
BLAST of Ggra5785.t1 vs. uniprot
Match: A0A6A4VH02 (Cryptochrome-1 n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4VH02_AMPAM)

HSP 1 Score: 146 bits (368), Expect = 1.060e-42
Identity = 68/116 (58.62%), Postives = 86/116 (74.14%), Query Frame = 0
Query:    1 MRELALTGFMSNRGRQNVASFLIHDLEFPDWRAGAEYFESILIDHDVASNWGNWAYLAGVGSDPRGGRKFNVIKQSIQYDPNGWFIQRWCPELVDLPPPMIHEPHKLSAEALKGVD 116
            MREL LTG+MSNRGRQNVASFL  DL   DWR GAE+FES L+DHDV SN+GNW Y AG+G+DPR  RKFN+IKQ++ YDP G ++++W PEL  +P   +H P  L+    + +D
Sbjct:   11 MRELRLTGWMSNRGRQNVASFLTKDLGL-DWRLGAEWFESQLLDHDVCSNYGNWNYSAGIGNDPRENRKFNMIKQAMDYDPQGDYVRQWVPELRSVPDGRVHMPWTLTPSVRRDID 125          
BLAST of Ggra5785.t1 vs. uniprot
Match: A0A2T4X9Y8 (Cryptochrome DASH n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A2T4X9Y8_9BACT)

HSP 1 Score: 153 bits (386), Expect = 5.270e-42
Identity = 70/108 (64.81%), Postives = 86/108 (79.63%), Query Frame = 0
Query:    1 MRELALTGFMSNRGRQNVASFLIHDLEFPDWRAGAEYFESILIDHDVASNWGNWAYLAGVGSDPRGGRKFNVIKQSIQYDPNGWFIQRWCPELVDLPPPMIHEPHKLS 108
            MREL LTGFMSNRGRQNVASFL++DL   +W+ GAEYFES+LID+DV SNWGNW Y+AGVGSDPR  R FN+IKQ+  YDP G +++ W PEL +LP  ++H P +L 
Sbjct:  346 MRELNLTGFMSNRGRQNVASFLVNDLNV-NWQMGAEYFESLLIDYDVTSNWGNWNYVAGVGSDPRENRYFNIIKQARNYDPKGEYVKLWLPELAELPAELVHIPDQLK 452          
BLAST of Ggra5785.t1 vs. uniprot
Match: DASH family cryptochrome n=1 Tax=Alcanivorax limicola TaxID=2874102 RepID=UPI001CBFD6B7 (DASH family cryptochrome n=1 Tax=Alcanivorax limicola TaxID=2874102 RepID=UPI001CBFD6B7)

HSP 1 Score: 152 bits (385), Expect = 6.390e-42
Identity = 71/104 (68.27%), Postives = 82/104 (78.85%), Query Frame = 0
Query:    1 MRELALTGFMSNRGRQNVASFLIHDLEFPDWRAGAEYFESILIDHDVASNWGNWAYLAGVGSDPRGGRKFNVIKQSIQYDPNGWFIQRWCPELVDLPPPMIHEP 104
            MREL  TGFMSNRGRQNVASFLIHDL+  DWR GA +FE  L+D+DVASNWGNWAY+AGVGSDPR GR FNV+ Q+++YDP G ++  W PEL  LPP   H P
Sbjct:  325 MRELNATGFMSNRGRQNVASFLIHDLQ-QDWRLGAAWFEQQLLDYDVASNWGNWAYIAGVGSDPRQGRWFNVLGQALRYDPQGDYVSHWLPELAGLPPARRHMP 427          
BLAST of Ggra5785.t1 vs. uniprot
Match: A0A1N7KQ54 (Cryptochrome DASH n=2 Tax=Belliella pelovolcani TaxID=529505 RepID=A0A1N7KQ54_9BACT)

HSP 1 Score: 152 bits (385), Expect = 6.710e-42
Identity = 72/113 (63.72%), Postives = 87/113 (76.99%), Query Frame = 0
Query:    1 MRELALTGFMSNRGRQNVASFLIHDLEFPDWRAGAEYFESILIDHDVASNWGNWAYLAGVGSDPRGGRKFNVIKQSIQYDPNGWFIQRWCPELVDLPPPMIHEPHKLSAEALK 113
            MREL  TGFMSNRGRQNVASFL++DL   DWR GAEYFES+LID+DV SNWGNW Y+AGVG+DPR  R FN++KQ+  YD  G +I+ W PEL ++P   IH+P  LS + LK
Sbjct:  343 MRELNATGFMSNRGRQNVASFLVNDLNI-DWRWGAEYFESLLIDYDVCSNWGNWMYVAGVGNDPRENRYFNILKQANNYDRKGAYIRHWIPELAEIPGFDIHQPFDLSTKELK 454          
BLAST of Ggra5785.t1 vs. uniprot
Match: A0A8J1Y716 (Ofus.G151735 protein (Fragment) n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1Y716_OWEFU)

HSP 1 Score: 148 bits (374), Expect = 7.860e-42
Identity = 70/117 (59.83%), Postives = 86/117 (73.50%), Query Frame = 0
Query:    1 MRELALTGFMSNRGRQNVASFLIHDLEFPDWRAGAEYFESILIDHDVASNWGNWAYLAGVGSDPRGGRKFNVIKQSIQYDPNGWFIQRWCPELVDLPPPMIHEPHKLSAEALKGVDI 117
            MRE+A TGFMSNRGRQNVASFL  DL+  DWR GAE+FES+LIDHDV SN+GNW Y AG+G+DPR  RKFN++KQ + YDP G +++ W PEL +L    +H P  LS   L   +I
Sbjct:  113 MREMAATGFMSNRGRQNVASFLTKDLKL-DWRMGAEWFESMLIDHDVCSNYGNWQYSAGIGNDPRQDRKFNMVKQGLDYDPQGEYVRLWVPELENLKTGDVHTPWALSTGQLANANI 228          
The following BLAST results are available for this feature:
BLAST of Ggra5785.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUZ93.370e-7290.60Cryptochrome DASH n=1 Tax=Gracilariopsis chorda Ta... [more]
R7QSK11.060e-5878.63Cryptochrome DASH n=1 Tax=Chondrus crispus TaxID=2... [more]
A0A3M1J9U48.570e-4466.67Cryptochrome DASH (Fragment) n=1 Tax=Bacteroidetes... [more]
A0A819YQV62.130e-4362.18Hypothetical protein n=1 Tax=Adineta steineri TaxI... [more]
DASH family cryptochrome n=1 Tax=Lewinella cohaerens TaxID=70995 RepID=UPI00036F19159.210e-4365.74DASH family cryptochrome n=1 Tax=Lewinella cohaere... [more]
A0A6A4VH021.060e-4258.62Cryptochrome-1 n=1 Tax=Amphibalanus amphitrite Tax... [more]
A0A2T4X9Y85.270e-4264.81Cryptochrome DASH n=1 Tax=Bacteroidetes bacterium ... [more]
DASH family cryptochrome n=1 Tax=Alcanivorax limicola TaxID=2874102 RepID=UPI001CBFD6B76.390e-4268.27DASH family cryptochrome n=1 Tax=Alcanivorax limic... [more]
A0A1N7KQ546.710e-4263.72Cryptochrome DASH n=2 Tax=Belliella pelovolcani Ta... [more]
A0A8J1Y7167.860e-4259.83Ofus.G151735 protein (Fragment) n=1 Tax=Owenia fus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.579.10DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3coord: 1..118
e-value: 1.8E-46
score: 159.6
NoneNo IPR availablePANTHERPTHR11455:SF22CRYPTOCHROME DASHcoord: 1..110
IPR005101Cryptochrome/DNA photolyase, FAD-binding domainPFAMPF03441FAD_binding_7coord: 1..111
e-value: 8.7E-37
score: 126.6
IPR002081Cryptochrome/DNA photolyase class 1PANTHERPTHR11455CRYPTOCHROMEcoord: 1..110
IPR036134Cryptochrome/DNA photolyase, FAD-binding domain-like superfamilySUPERFAMILY48173Cryptochrome/photolyase FAD-binding domaincoord: 1..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000935_piloncontigtig00000935_pilon:241215..241571 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra5785.t1Ggra5785.t1Gracilaria gracilis GNS1m malemRNAtig00000935_pilon 241215..241571 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra5785.t1 ID=Ggra5785.t1|Name=Ggra5785.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=119bp
MRELALTGFMSNRGRQNVASFLIHDLEFPDWRAGAEYFESILIDHDVASN
WGNWAYLAGVGSDPRGGRKFNVIKQSIQYDPNGWFIQRWCPELVDLPPPM
IHEPHKLSAEALKGVDII*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005101Cryptochr/Photolyase_FAD-bd
IPR002081Cryptochrome/DNA_photolyase_1
IPR036134Crypto/Photolyase_FAD-like_sf